Journal ArticleDOI
Coming to Grips with N−H···N Bonds. 1. Distance Relationships and Electron Density at the Bond Critical Point
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In this article, the geometry of N−H−N hydrogen bonds was optimized at the RHF/6-31G** level and the results for 67 species were reported.Abstract:
In an attempt to discover and analyze trends in distance relationships and properties at the bond critical point (BCP) in linear or near-linear N−H···N hydrogen bonds, the geometry of such bonds in a large number of suitable simple chemical species was optimized at the RHF/6-31G** level. The results for 67 of these are reported here; the geometry of 19 of them was optimized also at the MP2/6-31G** level. Correlations between the internuclear N−H, H···N, and N···N separations as well as between the N···BCP and H···BCP distances for these data sets and for different model functions are described in detail. The special case of symmetric N−H−N bonds is discussed; comparison with available experimental evidence shows that the correlation functions derived from the ab initio data have useful predictive value for crystallographic determinations involving short N−H−N bonds. Analysis of the correlation between the d(N−H) distance and the electron density ρc at the BCP has shown that although acceptable d,ρc repres...read more
Citations
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From weak to strong interactions: A comprehensive analysis of the topological and energetic properties of the electron density distribution involving X–H⋯F–Y systems
TL;DR: In this paper, the topological and energetic properties of the electron density distribution ρ(r) of isolated pairwise H⋯F interaction have been theoretically calculated at several geometries and represented against the corresponding internuclear distances.
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What is the covalency of hydrogen bonding
TL;DR: The decomposition of the interaction energy is useful to analyze hydrogen bonding and particularly to answer the question of what does the covalency of hydrogen bonding mean.
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Universal Features of the Electron Density Distribution in Hydrogen‐Bonding Regions: A Comprehensive Study Involving H⋅⋅⋅X (X=H, C, N, O, F, S, Cl, π) Interactions
TL;DR: Topological analyses of the theoretically calculated electron densities for a large set of 163 hydrogen-bonded complexes show that HX interactions can be classified in families according to X (X=atom or pi orbital), and theoretical dependencies can be applied to the analysis of the experimental electron density for detecting either unconventional hydrogen bonds or problems in the modelling of the Experimental electron density.
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Extended Weak Bonding Interactions in DNA: π-Stacking (Base−Base), Base−Backbone, and Backbone−Backbone Interactions†
TL;DR: Several weak interactions in nucleic acids are reported on, which, collectively, can make a nonnegligible contribution to the structure and stability of these molecules.
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Bonding in Polycyclic Aromatic Hydrocarbons in Terms of the Electron Density and of Electron Delocalization
TL;DR: In this paper, it was shown that the two-electron information contained within the delocalization index can be estimated from the electron density at the bond critical point, a mapping that has no a priori reason to exist.
References
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Hydrogen bond strengths revealed by topological analyses of experimentally observed electron densities
TL;DR: In this article, the topological properties of ρ(r) at the intermolecular critical points of 83 experimentally observed hydrogen bonds [X-H⋯O (X=C,N,O)], using accurate X-ray diffraction experiments, were analyzed.
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"Schrödinger inequalities" and asymptotic behavior of the electron density of atoms and molecules
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Gas Phase Solvation of the Ammonium Ion by NH3 and H2O and Stabilities of Mixed Clusters NH4+ (NH3)n(H2O)w
TL;DR: The gas phase equilibria and those leading to mixed clusters like were measured with a pulsed electron beam high pressure ion source mass spectrometer as mentioned in this paper, where the ion source contained pure ammonia or mixtur...
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Theoretical Study of Strong Hydrogen Bonds between Neutral Molecules: The Case of Amine Oxides and Phosphine Oxides as Hydrogen Bond Acceptors
Ibon Alkorta,José Elguero +1 more
TL;DR: In this article, a theoretical study of the ability of amine oxides and phosphine oxide as hydrogen bond acceptors has been carried out using ammonium oxide, trimethylamine oxide, and PHO as model systems.
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Comparison of models to correlate electron density at the bond critical point and bond distance
TL;DR: In this article, the authors compared two models to correlate the electron density at the bond critical point with the bond distance and found that the double logarithmic model provided good results when individual bond types were correlated.