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Complex networks: Structure and dynamics

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The major concepts and results recently achieved in the study of the structure and dynamics of complex networks are reviewed, and the relevant applications of these ideas in many different disciplines are summarized, ranging from nonlinear science to biology, from statistical mechanics to medicine and engineering.
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This article is published in Physics Reports.The article was published on 2006-02-01 and is currently open access. It has received 9441 citations till now. The article focuses on the topics: Network dynamics & Complex network.

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Community detection in networks with positive and negative links

TL;DR: An existing Potts model is extended to incorporate negative links as well, resulting in a method similar to the clustering of signed graphs, as dealt with in social balance theory, but more general.
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Network scaling effects in graph analytic studies of human resting-state fMRI data

TL;DR: Investigating how variations in parcellation templates affect key graph analytic measures of functional brain organization using resting-state fMRI in 30 healthy volunteers found that gross inferences regarding network topology were robust to the template used, but that both absolute values of, and individual differences in, specific parameters such as path length, clustering, small-worldness, and degree distribution descriptors varied considerably.
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Evolution of Cooperation in Multiplex Networks

TL;DR: This work shows that the resilience of cooperative behaviors for extremely large values of the temptation to defect is enhanced by the multiplex structure of interdependent networks, thus providing a new way out for cooperation to survive in structured populations.

Invited review The application of graph theoretical analysis to complex networks in the brain

TL;DR: In this paper, the authors focus on the correlation between the structural properties of networks and the dynamics of these networks and demonstrate through evidence from computational studies, in vivo experiments, and functional MRI, EEG and MEG studies in humans, that both the functional and anatomical connectivity of the healthy brain have many features of a small world network, but only to a limited extent of a scale free network.
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The structure and dynamics of multilayer networks

TL;DR: In this article, a comprehensive review on both structural and dynamical organization of graphs made of diverse relationships (layers) between its constituents, and cover several relevant issues, from a full redefinition of the basic structural measures, to understanding how the multilayer nature of the network affects processes and dynamics.
References
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Journal ArticleDOI

Optimization by Simulated Annealing

TL;DR: There is a deep and useful connection between statistical mechanics and multivariate or combinatorial optimization (finding the minimum of a given function depending on many parameters), and a detailed analogy with annealing in solids provides a framework for optimization of very large and complex systems.
Book

Computers and Intractability: A Guide to the Theory of NP-Completeness

TL;DR: The second edition of a quarterly column as discussed by the authors provides a continuing update to the list of problems (NP-complete and harder) presented by M. R. Garey and myself in our book "Computers and Intractability: A Guide to the Theory of NP-Completeness,” W. H. Freeman & Co., San Francisco, 1979.
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Collective dynamics of small-world networks

TL;DR: Simple models of networks that can be tuned through this middle ground: regular networks ‘rewired’ to introduce increasing amounts of disorder are explored, finding that these systems can be highly clustered, like regular lattices, yet have small characteristic path lengths, like random graphs.
Book

Matrix computations

Gene H. Golub
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The authors review the major concepts and results recently achieved in the study of the structure and dynamics of complex networks, and summarize the relevant applications of these ideas in many different disciplines, ranging from nonlinear science to biology, from statistical mechanics to medicine and engineering.