Computational Resources for Molecular Biology 2021.
About: This article is published in Journal of Molecular Biology.The article was published on 2021-03-24. It has received None citations till now.
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TL;DR: Moltemplate as discussed by the authors is a file format for storing coarse-grained molecular models and the forces that act on them, as well as a program that converts moltemplates files into input files for LAMMPS, a popular molecular dynamics engine.
119 citations
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TL;DR: FunRich tool is discussed, which enables biologists to perform functional enrichment analysis on the generated datasets and is user-friendly and enables users to perform various analysis on their datasets with minimal or no aid from bioinformaticians.
104 citations
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TL;DR: The architectural redesign of RCSB PDB data delivery services that build on existing PDBx/mmCIF data schemas are presented, empowering users to address a wide array of research problems in fundamental biology, biomedicine, biotechnology, bioengineering, and bioenergy.
88 citations
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TL;DR: The GeneCaRNA database as mentioned in this paper is a new all-inclusive gene-centric ncRNA database within the GeneCards Suite, which is integrated from four community-backed data structures: the major transcript database RNAcentral with its 20 encompassed databases, and the nc RNA entries of three major gene resources HGNC, Ensembl and NCBI Gene.
29 citations
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TL;DR: Li et al. as mentioned in this paper constructed a Prokaryotic Promoter Database (PPD), which records the experimentally validated promoters in prokaryotes, from published articles and provided a friendly interface for users to browse, search, blast, visualize, submit and download data.
27 citations