CRYSOL : a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
Citations
2,105 citations
Cites methods from "CRYSOL : a program to evaluate X-ra..."
...The envelopes of the ribosomal proteins were computed from their atomic coordinates in the Protein Data Bank (PDB, Bernstein et al., 1977) using the CRYSOL program ( Svergun et al., 1995 )....
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...The envelopes of the ribosomal proteins were computed from their atomic coordinates in the Protein Data Bank (PDB, Bernstein et al., 1977) using the CRYSOL program (Svergun et al., 1995)....
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1,959 citations
1,634 citations
Cites methods from "CRYSOL : a program to evaluate X-ra..."
...…intensities coming from different sources: (a) the theoretical scattering intensities from high-resolution PDB structures calculated by CRYSOL (Svergun et al., 1995), (b) the experimental scattering curves and (c) the regularized (and desmeared if necessary) scattering curves obtained by GNOM…...
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...Originally (Petoukhov et al., 2007), the interfaces to the ab initio programs DAMMIN (Svergun, 1999) and GASBOR (Svergun et al., 2001) and atomic structure-based programs CRYSOL (Svergun et al., 1995) and SASREF (Petoukhov & Svergun, 2005) were provided....
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...The programs CRYSOL (Svergun et al., 1995) for X-rays and CRYSON (Svergun et al., 1998) for neutrons evaluate the solution scattering from macromolecules with known atomic structure and fit a predicted curve IcalcðsÞ to experimental scattering data IexpðsÞ by minimizing the discrepancy (Feigin &…...
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...…taken from the Protein Data Bank (PDB; Bernstein et al., 1977) (of these, 34 and 11 proteins were solved by X-ray and electron crystallography, respectively, and eight were obtained by NMR), and their theoretical scattering intensities were computed using the program CRYSOL (Svergun et al., 1995)....
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1,458 citations
1,363 citations
Cites methods from "CRYSOL : a program to evaluate X-ra..."
...puted using the program CRYSOL (Svergun et al., 1995) assuming the bound solvent to be 10% denser than the bulk (drb 5 30 e/nm (3); Svergun et al....
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...© 2001 by the Biophysical Society 0006-3495/01/06/2946/08 $2.00 puted using the program CRYSOL (Svergun et al., 1995) assuming the bound solvent to be 10% denser than the bulk (drb 5 30 e/nm 3; Svergun et al., 1995, 1998)....
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...The scattering pattern computed using CRYSOL with coordinates from the ligand-bound form of HSA yielded a better fit to the experimental data compared with the ligandfree form....
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References
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