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Journal ArticleDOI

Developing New Antimicrobial Therapies: Are Synergistic Combinations of Plant Extracts/Compounds with Conventional Antibiotics the Solution?

01 Jul 2017-Pharmacognosy Reviews (Medknow Publications)-Vol. 11, Iss: 22, pp 57-72
TL;DR: This study reviews the recent literature on combinational antibiotic therapies to highlight their potential and to guide future research in this field.
Abstract: The discovery of penicillin nearly 90 years ago revolutionized the treatment of bacterial disease Since that time, numerous other antibiotics have been discovered from bacteria and fungi, or developed by chemical synthesis and have become effective chemotherapeutic options However, the misuse of antibiotics has lessened the efficacy of many commonly used antibiotics The emergence of resistant strains of bacteria has seriously limited our ability to treat bacterial illness, and new antibiotics are desperately needed Since the discovery of penicillin, most antibiotic development has focused on the discovery of new antibiotics derived from microbial sources, or on the synthesis of new compounds using existing antibiotic scaffolds to the detriment of other lines of discovery Both of these methods have been fruitful However, for a number of reasons discussed in this review, these strategies are unlikely to provide the same wealth of new antibiotics in the future Indeed, the number of newly developed antibiotics has decreased dramatically in recent years Instead, a reexamination of traditional medicines has become more common and has already provided several new antibiotics Traditional medicine plants are likely to provide further new antibiotics in the future However, the use of plant extracts or pure natural compounds in combination with conventional antibiotics may hold greater promise for rapidly providing affordable treatment options Indeed, some combinational antibiotic therapies are already clinically available This study reviews the recent literature on combinational antibiotic therapies to highlight their potential and to guide future research in this field

Summary (3 min read)

INTRODUCTION

  • Bacteria continue to pose one of the greatest risks to human health.
  • Similarly, bacteria have developed resistance to many other commonly used antibiotics [Figure 1].[4].
  • Surprisingly, many of the bacteria which cause human disease are also essential to the human microbiome.[6].

A BRIEF HISTORY OF ANTIBIOTICS

  • Until the early part of the 20th century, the treatment of pathogenic infections relied on traditional medicines (usually plant material).
  • The discovery of penicillin was the start of a new era of treatment options for bacterial infections. [8].
  • As a consequence, two main events have occurred in parallel throughout the last century.
  • The discovery of antimicrobial agents has steadily decreased to no more than a few antibiotics synthesized or discovered in the last decade.
  • The development of alternative treatment methods is crucial and considered by WHO to be perhaps the biggest challenge facing medical science.[5].

Antibiotic function

  • Depending on their class, antibiotics may halt the synthesis of proteins and metabolites, disrupt binary fission, or damage the integrity of the cell wall.[16].
  • Bacteria can develop resistance innately by selective pressures or acquire the resistance machinery from neighboring microbes.
  • Bacteria deploy mobile resistance elements (MREs), including transposons, plasmids, and integrons, carrying the genetic material required to confer resistance but not the genes essential for cell function.
  • MREs can be transmitted between bacteria of different phyla either directly between adjacent cells  or indirectly by salvaging intact elements .
  • Selective pressures for MREs essential for survival promote the preservation of drug resistance mechanisms in bacterial progeny.[11,17].

EVOLUTION OF BACTERIAL RESISTANCE

  • The “Golden Age” of antibiotics saw the development of hundreds of antimicrobials for curing infectious diseases.
  • S. aureus infections became far less serious, with mortality rates declining an estimated 80%.
  • Several factors contribute to the increase in antibiotic-resistant bacterial strains.
  • Numerous pathogenic microbes have acquired multiple drug resistance, including Streptococcus pneumoniae, a causative agent of various common diseases such as otitis media, pneumonia, and meningitis.[15].
  • Around two-thirds of all ear infections are bacterial, and approximately, 85% of the cases can be resolved without the need for antibiotic treatment.

Multi-resistant strains of microbes: “Superbugs”

  • (a) Antibiotic targets and (b) bacterial resistance mechanisms b a 60 Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017, also known as Figure 2.
  • Thus, the therapeutic options available for these diseases are significantly reduced.
  • Certain strains of MDR microbes have also acquired increased virulence and enhanced transmissibility.
  • Similarly, S. aureus became resistant to penicillin treatment relatively soon after its discovery.
  • The overuse of triclosan in soaps, disinfectants, and clothes detergents has led to the formation of triclosan-resistant pathogenic strains, including MRSA.[27,28].

Resistance mechanisms

  • Bacteria have developed numerous methods with which to resist antibiotic action  [Figure  2b].
  • The drug insensitivity in antibiotic-resistant bacterial strains is generally due to resistance genes and their downstream effects.
  • The genes are transported through plasmids that favor the survival of the bacteria in various destructive environments.
  • Often, antibiotics must be modified or used in combination against MDR bacteria to avoid these mechanisms.[32].
  • Modified β-lactams,  (e.g.,  methicillin, oxacillin), are immune to degradation by narrow-spectrum β-lactamases.

Bacterial resistance and the environment

  • The gastrointestinal system of humans and animals is ideal reservoirs for MDR development.
  • Antibiotics fed to livestock may reenter the environment directly when recycled onto crops, soils, and detritus as manure.
  • There is a clear correlation between the increase in antimicrobial resistance and the simultaneous increase in morbidity, mortality, and cost associated with disease therapy.[49].
  • Tetracycline and nitrofurantoin have proved ineffective, with resistance noted against ampicillin and extended-spectrum cephalosporins[60].
  • First identified as an outbreak of Enterococcus faecium and Enterococcus faecalis infections resistant to vancomycin,[69] the resistance was found to be due to the plasmid-borne genes vanA, vanB, and vanC.[70,71].

ALTERNATIVES: NEW SOURCES OF ANTIBIOTIC THERAPIES

  • Vaccination used in conjunction with antibiotics Antibiotics alone are not a sustainable solution for the treatment of bacterial infections.
  • Medicinal alternatives are available that show effective antimicrobial activity where antibiotics are not effective, or that work to enhance antibiotic activity in  vivo.
  • Vaccines provide a prophylactic solution to treatment.[119] Carbavance (meropenem + vaborbactam) Meropenem + novel boronate β-lactamase inhibitor [113] Plazomicin Aminoglycoside [114] Solithromycin Macrolide  [115].
  • This has already been observed in hospitalized children.[123].

Bacteriophage therapy

  • Bacteriophages present another alternative in the treatment of antibiotic resistant bacteria.
  • Infecting and killing of Shigella spp. with bacteriophage was first observed long before Fleming would first observe the effects of penicillin.[124].
  • Furthermore, the majority of follow-up research was conducted in Eastern Europe and not translated into English.
  • This treatment modality is promising for some bacterial pathogens, although much more research is required in this field.

TRADITIONAL MEDICINES AND PLANT‑DERIVED ANTIBIOTIC THERAPIES

  • Traditional healing systems have relied upon medicinal plants for the treatment of bacterial infections for many centuries.
  • These bioactive substances  include tannins, alkaloids, carbohydrates and glycosides, terpenoids, steroids, flavonoids, and coumarins.[130].
  • Studies suggest PBAs have a variety of applications against many pathogens.
  • A  recent report by the WHO described medicinal plants as one of the best potential sources of new drugs.[130].
  • There are still only relatively few plant-derived drugs in clinical use.

COMBINATIONAL ANTIMICROBIAL CHEMOTHERAPIES

  • There are several ways in which antimicrobial resistance can be prevented, reduced and/or reversed and using medicinal plant extracts with intrinsic Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017 65 antimicrobial properties has proven to be a relatively effective method.
  • A combinational approach that allows synergistic interaction between plant extracts and conventional antibiotics is arguably the most effective method to combat antibacterial resistance.
  • Synergistic evaluation studies examine combinations of two or more drugs in the hopes of achieving an enhanced overall effect which is substantially greater than the sum of their individual parts.[164].
  • One drug may neutralize or overwhelm the bacterial resistance mechanisms, repurposing the antibiotic drug by increasing its efficacy.
  • There is enough evidence to suggest that the β-lactamase inhibitor may bind irreversibly, contributing to the overall efficacy of the antibiotic component of the combination. [170].

Plant extract FIC A FIC B FIC Interpretation

  • S. fruticosa=Salvia fruticosa, S. officinalis=Salvia officinalis, S. sclarea=Salvia sclarea, A. tinctoria=Anthemis tinctoria, C. nobile=Chamaemelum nobile, M. recutita=Matricaria recutita, T. argyophyllum=Tanacetum argyophyllum, T. parthenicum=Tanacetum parthenicum, MICs=Minimum inhibitory concentrations, FIC= Fractional inhibitory concentration Figure 3: (a) An isobologram, used to determine whether drug combinations produce effects that differ from the effects of the drugs used individually.
  • Over the last decade, the number of studies examining the synergistic interaction between plant extracts and resistance-prone antibiotics has significantly increased.
  • It is possible that the Petalostigma spp. extracts examined in the Ilanko et  al.[183] study may also contain an irreversible β-lactamase inhibitor which functions similarly to clavulanic acid to block the bacterial antimicrobial resistance mechanism.
  • Efflux pumps are the main bacterial resistance mechanism which renders tetracycline inactive.[182].

CONCLUSIONS

  • The early successes in antibiotic therapy yielded life-saving outcomes and is an example of possibly the most remarkable global scientific advance in modern medicine.
  • The effectiveness of antibiotics used against a 68 Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017 myriad of infectious microorganisms has been severely thwarted by the evolution of microbial resistance, arising as early as a decade following the discovery of penicillin.
  • There are numerous other advantages associated with the use of synergistic therapies.
  • Such a therapeutic strategy is quite specific, repurposing only a single class (or limited classes) of antibiotic.

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Developing new antimicrobial therapies: Are synergistic
combinations of plant extracts/compounds with conventional
antibiotics the solution?
Author
Cheesman, MJ, Ilanko, A, Blonk, B, Cock, IE
Published
2017
Journal Title
Pharmacognosy Reviews
DOI
https://doi.org/10.4103/phrev.phrev_21_17
Copyright Statement
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© 2017 Pharmacognosy Reviews | Published by Wolters Kluwer -Medknow 57
Developing New Antimicrobial Therapies: Are Synergistic
Combinations of Plant Extracts/Compounds with Conventional
Antibiotics the Solution?
Matthew J. Cheesman
1,2
, Aishwarya Ilanko
3
, Baxter Blonk
3
, Ian E. Cock
3,4
1
School of hP armacy and Pharmacology, Gold Coast Campus, Grith University, Parklands Drive, Southport,
2
Menzies Health Institute Queensland, Quality Use of
Medicines Network, Queensland 4222,
3
School of Natural Sciences, Nathan Campus, Grith University,
4
Environmental Futures Research Institute, Nathan Campus,
Grith University, Nathan, Queensland 4111, Australia
ABSTRACT
The discovery of penicillin nearly 90years ago revolutionized the treatment of bacterial disease. Since that time, numerous other antibiotics have been
discovered from bacteria and fungi, or developed by chemical synthesis and have become effective chemotherapeutic options. However, the misuse of
antibiotics has lessened the efcacy of many commonly used antibiotics. The emergence of resistant strains of bacteria has seriously limited our ability
to treat bacterial illness, and new antibiotics are desperately needed. Since the discovery of penicillin, most antibiotic development has focused on the
discovery of new antibiotics derived from microbial sources, or on the synthesis of new compounds using existing antibiotic scaffolds to the detriment
of other lines of discovery. Both of these methods have been fruitful. However, for a number of reasons discussed in this review, these strategies are
unlikely to provide the same wealth of new antibiotics in the future. Indeed, the number of newly developed antibiotics has decreased dramatically in
recent years. Instead, a reexamination of traditional medicines has become more common and has already provided several new antibiotics. Traditional
medicine plants are likely to provide further new antibiotics in the future. However, the use of plant extracts or pure natural compounds in combination
with conventional antibiotics may hold greater promise for rapidly providing affordable treatment options. Indeed, some combinational antibiotic therapies
are already clinically available. This study reviews the recent literature on combinational antibiotic therapies to highlight their potential and to guide future
research in this eld.
Key words: β‑lactamase, clavulanic acid, efux pump inhibitors, multi‑drug resistance, superbugs, synergy
INTRODUCTION
Despite the advancements of modern medicine, bacteria continue to
pose one of the greatest risks to human health. Since the discovery
of penicillin in 1929 by Fleming,
[1]
microbial-derived antibiotics
have completely revolutionized antibacterial therapy. Indeed,
penicillin became the main therapeutic option for infectious diseases.
Furthermore, that discovery resulted in a new eld of antibacterial
drug discovery from bacteria and fungi which has provided medicine
with a myriad of new, highly eective antibiotic compounds.
However, by the 1940s, widespread use of penicillin resulted in the
emergence of new strains of microbes capable of destroying the
drug and negating its eects.
[2,3]
Similarly, bacteria have developed
resistance to many other commonly used antibiotics[Figure1].
[4]
is
emerging trend is concerning and is considered by the World Health
Organization (WHO) to be perhaps the most urgent issue facing
medical science.
[5]
Bacteria are the oldest and most prevalent organisms on earth. ey are
varied, versatile, and are commensal to all mammals. ey can be both
crucial and detrimental to health, depending on host interactions. Climate,
habitat, ethnicity, genetics, diet, and activity cause the microbiome to
uctuate in diversity and may alter host susceptibility to opportunistic
pathogens. Evolutionarily, humans have learned to coexist with various
microbes that are omnipresent on this planet. Although certain microbes
can be mutualistic, there is a large proportion that are pathogenic and
can cause a myriad of potentially life-threatening infectious diseases.
Surprisingly, many of the bacteria which cause human disease are also
essential to the human microbiome.
[6]
Consuming drugs alters the balance
of microbe populations in the gut and may instigate a range of adverse
eects while still providing treatment for specic diseases. Some bacteria
may persist over susceptible populations by resisting the drug altogether.
Multidrug resistance(MDR), is dened as nonsusceptibility to at least
one agent in more than two of the known categories for antimicrobials.
[7]
Pathogens which are recognized as extensively drug-resistant(XDR) are
susceptible to only two or fewer of the antimicrobial categories, and thus,
pose a substantial threat to human health.
Concurrent with the increased incidence of bacterial resistance to
antibiotics, there has been a corresponding decrease in antimicrobial
Cite this article as: Cheesman MJ, Ilanko A, Blonk B, Cock IE. Developing new
antimicrobial therapies: Are synergistic combinations of plant extracts/compounds
with conventional antibiotics the solution? Phcog Rev 2017;11:57-72.
This is an open access article distributed under the terms of the Creative Commons
Attribution‑NonCommercial‑ShareAlike 3.0 License, which allows others to remix,
tweak, and build upon the work non‑commercially, as long as the author is credited
and the new creations are licensed under the identical terms.
For reprints contact: reprints@medknow.com
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www.phcogrev.com|www.phcog.net
Access this article online
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DOI:
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REVIEW ARTICLE
Correspondence:
Dr.Ian E. Cock,
Environmental Futures Research Institute, Nathan Campus,
Grifth University, Nathan, Queensland 4111, Australia.
E‑mail:I.Cock@grifth.edu.au

MATTHEW J. CHEESMAN, etal.: Synergistic Plant Extract–Antibiotic Combinations
58 Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017
discovery. is has directed researchers toward alternative therapies,
including traditional plant-based medicines, bacteriophage therapies,
and combinational therapies. is review discusses bacterial resistance
mechanisms and strategies(both common and novel) in the development
of new antibiotic therapies. In so doing, we highlight the use of
plant natural products and plant extracts, particularly in synergistic
combinations, as having particular promise for rapidly developing new,
eective treatment modalities available to combat pathogens resistant to
conventional antibiotic therapies.
A BRIEF HISTORY OF ANTIBIOTICS
Until the early part of the 20
th
century, the treatment of pathogenic infections
relied on traditional medicines(usually plant material). e discovery of
penicillin completely revolutionized the treatment of infectious diseases.
is serendipitous discovery resulted from a chance observation that the
growth of Staphylococcusaureus was inhibited by a blue mold(a fungus
from the Penicillium genus) in culture dishes,
[1]
demonstrating that some
microorganisms are capable of producing substances that can inhibit the
growth of other microbial species. e discovery of penicillin was the start
of a new era of treatment options for bacterial infections.
[8]
From that time,
until the latter part of the last century, there was an exponential increase
in the number of antibiotics discovered. Within decades of discovering
penicillin and the sulfonamides, various other antimicrobial agents
of varying properties were introduced to clinicians.
[9]
Indeed, twenty
new classes of antibiotics were developed in the two decades following
the introduction of penicillin for clinical use, including β-lactams,
aminoglycosides, tetracyclines, macrolides, uoroquinolones, and
cephalosporins. Modied β-lactams and β-lactamase inhibitors provided
eective treatment and management of the entire Enterobacteriaceae
family.
[10]
Another novel class of antibiotics would not be introduced again
until 1989. Each class of antibiotics has a unique core structure(scaold).
Subsequently, many antibiotics have been developed through synthetic
tailoring of these scaolds. e discoveries during the mid-1930s to
the early 1960s determined the chemical scaolds of the majority of
antibiotics used today. Existing antibiotics were subsequently modied to
reduce toxicity, improve their spectrum of activity or cross-assayed to test
increased ecacy with other antibiotics.
[11]
Scaolds of cephalosporins,
penicillins, quinolones, and macrolides constitute almost three-quarters
of the new antibiotics discovered between 1981 and 2005.
[12]
e golden
age of antibiotic discovery ended in the early 1960s, and the evolution
of bacterial resistance has since superseded drug discovery. A timeline
of antibiotic implementation and the rise of drug resistance is shown in
Figure1.
e improper and misuse of antibiotics has resulted in the widespread
development of resistance by many bacterial species.
[13,14]
As a
consequence, two main events have occurred in parallel throughout the
last century. e discovery of antimicrobial agents has steadily decreased
to no more than a few antibiotics synthesized or discovered in the last
decade.
[9]
Simultaneously, antibiotic resistance has rapidly increased,
creating multi-resistant organisms that are becoming dicult to manage
given the current antibiotic treatment regimens.
[15]
e development of
alternative treatment methods is crucial and considered by WHO to be
perhaps the biggest challenge facing medical science.
[5]
Antibiotic function
Antibiotics function to kill bacteria or inhibit their growth in a number
of ways [Figure2a]. Depending on their class, antibiotics may halt the
synthesis of proteins and metabolites, disrupt binary ssion, or damage
the integrity of the cell wall.
[16]
Bacteria can develop resistance innately by
selective pressures or acquire the resistance machinery from neighboring
microbes. Bacteria deploy mobile resistance elements(MREs), including
transposons, plasmids, and integrons, carrying the genetic material
required to confer resistance but not the genes essential for cell function.
MREs can be transmitted between bacteria of dierent phyla either
directly between adjacent cells(conjugation) or indirectly by salvaging
intact elements(transformation). Selective pressures for MREs essential
for survival promote the preservation of drug resistance mechanisms in
bacterial progeny.
[11,17]
EVOLUTION OF BACTERIAL RESISTANCE
e “Golden Age” of antibiotics saw the development of hundreds of
antimicrobials for curing infectious diseases. is eruption of new drugs
approved for human use, together with vaccinations, ended several
Figure1: The timeline of antibiotic development and the evolution of resistance. Blue arrows indicate antibiotic discovery and commercialization events,
whereas gold arrows represent bacterial resistance to antibiotics observed in patients

MATTHEW J. CHEESMAN, etal.: Synergistic Plant Extract–Antibiotic Combinations
Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017 59
major trends in infectious diseases. Half of all post-birth deaths caused
by Streptococcus pyogenes could be prevented with a 4-day prescription
of penicillin. S.aureus infections became far less serious, with mortality
rates declining an estimated 80%. Other diseases such as impetigo or
leprosy became rare or disappeared entirely in developed countries.
[18]
However, the eectiveness of many of these early antibacterial agents
is now limited due to the development of resistance by many bacterial
strains. Several factors contribute to the increase in antibiotic-resistant
bacterial strains. e use of antibiotics has increased at an exponential
rate throughout many industries.
[4]
Due to high demands, the production
of antibiotics has improved in eciency and lowered in cost. As a result,
these drugs are released into the environment at a signicant rate,
contributing to the selection of resistant strains. Numerous pathogenic
microbes have acquired multiple drug resistance, including Streptococcus
pneumoniae, a causative agent of various common diseases such as
otitis media, pneumonia, and meningitis.
[15]
Around two-thirds of all
ear infections are bacterial, and approximately, 85% of the cases can be
resolved without the need for antibiotic treatment. However, antibiotics
are still prescribed to almost every child in the United States presenting
with an ear infection, further contributing to this resistance. As a result
of misuse, penicillin can no longer be relied on for the treatment of
meningitis caused by S. pneumoniae. is, together with the overuse
or misuse of antibiotics, has inicted various selective pressures on
pathogenic microbes, promoting resistance.
Multi-resistant strains of microbes: “Superbugs”
e number of MDR microbes (commonly known as superbugs) is
increasing at a signicant rate as a result of widespread antibiotic misuse.
Figure2:(a) Antibiotic targets and(b) bacterial resistance mechanisms
b
a

MATTHEW J. CHEESMAN, etal.: Synergistic Plant Extract–Antibiotic Combinations
60 Pharmacognosy Reviews, Volume 11, Issue 22, July-December 2017
ese MDR microbes increase the rate of morbidity and mortality due
to multiple mutations in related diseases.
[19,20]
us, the therapeutic
options available for these diseases are signicantly reduced. Certain
strains of MDR microbes have also acquired increased virulence and
enhanced transmissibility. Tuberculosis currently aects around a third
of the human population.
[21]
Although streptomycin and isoniazid
have previously provided eective treatment for this disease, the
development of resistance was rapid, and XDR strains and totally drug
resistant (TDR) forms of the pathogen have evolved.
[21,22]
Similarly,
S. aureus became resistant to penicillin treatment relatively soon aer
its discovery. Methicillin (the rst designer anti-resistance antibiotic)
was introduced in 1960 in the defense against penicillinases,
[23]
with
the emergence of methicillin-resistant S.aureus(MRSA) arising shortly
thereaer.
[24,25]
e establishment of MRSA within the community may
be due to the overuse of antibacterial-containing substances in common
household and hospital cleaning products to achieve a “super clean
environment.
[26]
Triclosan is a nonspecic biocide which has been used
in clinics and hospitals for many decades. e overuse of triclosan in
soaps, disinfectants, and clothes detergents has led to the formation of
triclosan-resistant pathogenic strains, including MRSA.
[27,28]
Likewise,
the misuse of various other antimicrobial agents has led to the formation
of many MDR pathogens, and this requires urgent attention before
antibiotic resistance becomes more dicult to control.
Resistance mechanisms
Bacteria have developed numerous methods with which to
resist antibiotic action [Figure 2b]. e drug insensitivity in
antibiotic-resistant bacterial strains is generally due to resistance
genes and their downstream eects. e genes are transported
through plasmids that favor the survival of the bacteria in various
destructive environments. Resistance genes may code for eux
pumps which eject antibiotic from the cells, as well as genes that
induce antibiotic-degrading/inactivating enzymes. ese traits can
be inherited, imported from other pathogens, or may occur through
random mutations in bacterial DNA.
[29,30]
Furthermore, microbes can
avoid antibiotic attack through several other mechanisms. Asummary
of some of the major antibiotic drug classes and bacterial resistance
mechanisms is shown in Table1. Each type or class of antibiotic can be
exposed to greater than one single mechanism of resistance and thus
may develop MDR, XDR, or TDR.
Bacterial resistance mechanisms may work to inhibit membrane
permeability to antibiotics, produce enzymes which neutralize
antibiotics or change the antibiotic target to neutralize the interaction.
[31]
e mechanisms may be specic to a target antibiotic or have a broad
spectrum of activity. Oen, antibiotics must be modied or used in
combination against MDR bacteria to avoid these mechanisms.
[32]
For example, β-lactams (e.g.,penicillin, ampicillin, and carbenicillin)
are oen used in combination with β-lactamase enzyme inhibitors.
Modied β-lactams, (e.g., methicillin, oxacillin), are immune to
degradation by narrow-spectrum β-lactamases. Methicillin-resistant
Staphylococcus spp. utilize extended-spectrum β-lactamases (ESBLs)
to resist the modied β-lactams,
[33]
or mutate their penicillin binding
protein(PBP) to render it unable to bind adequately to penicillin-like
drugs.
[34]
Table1: Antibiotics in clinical use and modes of resistance
Antibiotic class Examples Drug target Resistance modes
β-lactams Penicillins(ampicillin)
Cephalosporins(cephamycin)
Penems(meropenem)
Monobactams(aztreonam)
Peptidoglycan biosynthesis Hydrolysis
Eux
Altered target
Aminoglycosides Gentamicin
Streptomycin
Spectinomycin
Translation Phosphorylation
Acetylation
Nucleotidylation
Eux
Altered target
Glycopeptides Vancomycin
Teicoplanin
Peptidoglycan biosynthesis Reprogramming of peptidoglycan biosynthesis
Tetracyclines Minocycline
Tigecycline
Translation Monooxygenation
Eux
Altered target
Macrolides Erythromycin
Azithromycin
Translation Hydrolysis
Glycosylation
Phosphorylation
Eux
Altered target
Phenicols Chloramphenicol Translation Acetylation
Eux
Altered target
Quinolones Ciprooxacin DNA replication Acetylation
Eux
Altered target
Pyrimidines Trimethoprim C1 metabolism Eux
Altered target
Sulfonamides Sulfamethoxazole C1 metabolism Eux
Altered target

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Journal ArticleDOI
TL;DR: Suggestions on how to address this public health threat are suggested, including recommendations on training medical students about antibiotics, and strategies to overcome the problems of irrational antibiotic prescribing and AMR are concluded.
Abstract: Antibiotics changed medical practice by significantly decreasing the morbidity and mortality associated with bacterial infection. However, infectious diseases remain the leading cause of death in the world. There is global concern about the rise in antimicrobial resistance (AMR), which affects both developed and developing countries. AMR is a public health challenge with extensive health, economic, and societal implications. This paper sets AMR in context, starting with the history of antibiotics, including the discovery of penicillin and the golden era of antibiotics, before exploring the problems and challenges we now face due to AMR. Among the factors discussed is the low level of development of new antimicrobials and the irrational prescribing of antibiotics in developed and developing countries. A fundamental problem is the knowledge, attitude, and practice (KAP) regarding antibiotics among medical practitioners, and we explore this aspect in some depth, including a discussion on the KAP among medical students. We conclude with suggestions on how to address this public health threat, including recommendations on training medical students about antibiotics, and strategies to overcome the problems of irrational antibiotic prescribing and AMR.

113 citations

Journal ArticleDOI
TL;DR: The plant species examined in this study had varying degrees of antibacterial activity against bacterial planktonic and biofilm forms with some having good activity against both forms and many extracts had relatively low cytotoxicity leading to reasonable selectivity indices.
Abstract: Antimicrobial resistance (AMR) remains an important global health issue but the gap between AMR and development of new antimicrobials is increasing. Plant extracts may have good activity per se or may be sources of effective antimicrobial compounds which can act against planktonic and/or biofilms of pathogens. We determined the antimicrobial efficacy and cytotoxicity of some under-investigated plants from the Myrtaceae family endemic to South Africa. The ability of the plant extracts to inhibit or destroy pre-formed bacterial biofilms was also determined. Based on previous preliminary in vitro screening and on chemotaxonomy, nine species from the Myrtaceae family were selected. The antimicrobial activity of the crude acetone leaf extracts was determined against six common nosocomial pathogens, namely: Gram-positive bacteria (Bacillus cereus, Enterococcus faecalis, Staphylococcus aureus), Gram-negative bacteria (Escherichia coli, Pseudomonas aeruginosa, Salmonella Typhimurium) using a two-fold serial microdilution assay with p-iodonitrotetrazolium violet as growth indicator. The number of antimicrobial compounds present in extracts was determined by bioautography. Cytotoxicity of extracts was determined against Vero kidney cells using a colorimetric tetrazolium-based assay. The total antibacterial activity (TAA) in ml/g and selectivity index (LC50/MIC) of the plant extracts were calculated. A modified crystal violet assay was used to determine the antibiofilm activity of the extracts. Syzygium legatii, Syzygium masukuense, and Syzygium species A had the best activities against Gram-negative and Gram-positive bacteria (MIC) values ranging from 0.04–0.08 mg/ml. Eugenia erythrophylla had the best MIC (0.02 mg/ml) against Bacillus cereus. Many extracts had relatively low cytotoxicity (LC50 > 20 μg/ml) leading to reasonable selectivity indices. Three leaf extracts (Syzygium masukuense, Syzygium species A, and Eugenia natalitia) were moderately cytotoxic (20 μg/ml < LC50 < 100 μg/ml). The plant extracts had a good capacity to reduce biofilm formation and good to poor potential to destroy pre-formed biofilms. The plant species examined in this study had varying degrees of antibacterial activity against bacterial planktonic and biofilm forms with some having good activity against both forms. Several of these selected species may be potential candidates for further investigation to isolate antimicrobial compounds and to determine the mechanism of activity.

96 citations

References
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TL;DR: A group of international experts came together through a joint initiative by the European Centre for Disease Prevention and Control and the Centers for Disease Control and Prevention, to create a standardized international terminology with which to describe acquired resistance profiles in Staphylococcus aureus, Enterococcus spp.

8,695 citations


"Developing New Antimicrobial Therap..." refers background in this paper

  • ...Multidrug resistance (MDR), is defined as nonsusceptibility to at least one agent in more than two of the known categories for antimicrobials.[7] Pathogens which are recognized as extensively drug-resistant (XDR) are susceptible to only two or fewer of the antimicrobial categories, and thus, pose a substantial threat to human health....

    [...]

Journal ArticleDOI
TL;DR: A review of antibiotic resistance development over the past half-century can be found in this article, with the oft-restated conclusion that it is time to act and to restore the therapeutic applications of antibiotics.
Abstract: Antibiotics have always been considered one of the wonder discoveries of the 20th century. This is true, but the real wonder is the rise of antibiotic resistance in hospitals, communities, and the environment concomitant with their use. The extraordinary genetic capacities of microbes have benefitted from man's overuse of antibiotics to exploit every source of resistance genes and every means of horizontal gene transmission to develop multiple mechanisms of resistance for each and every antibiotic introduced into practice clinically, agriculturally, or otherwise. This review presents the salient aspects of antibiotic resistance development over the past half-century, with the oft-restated conclusion that it is time to act. To achieve complete restitution of therapeutic applications of antibiotics, there is a need for more information on the role of environmental microbiomes in the rise of antibiotic resistance. In particular, creative approaches to the discovery of novel antibiotics and their expedited and controlled introduction to therapy are obligatory.

4,364 citations

Journal ArticleDOI
02 Jun 2006-Science
TL;DR: Using metabolic function analyses of identified genes, the human genome is compared with the average content of previously sequenced microbial genomes and humans are superorganisms whose metabolism represents an amalgamation of microbial and human attributes.
Abstract: The human intestinal microbiota is composed of 10(13) to 10(14) microorganisms whose collective genome ("microbiome") contains at least 100 times as many genes as our own genome. We analyzed approximately 78 million base pairs of unique DNA sequence and 2062 polymerase chain reaction-amplified 16S ribosomal DNA sequences obtained from the fecal DNAs of two healthy adults. Using metabolic function analyses of identified genes, we compared our human genome with the average content of previously sequenced microbial genomes. Our microbiome has significantly enriched metabolism of glycans, amino acids, and xenobiotics; methanogenesis; and 2-methyl-d-erythritol 4-phosphate pathway-mediated biosynthesis of vitamins and isoprenoids. Thus, humans are superorganisms whose metabolism represents an amalgamation of microbial and human attributes.

4,111 citations


"Developing New Antimicrobial Therap..." refers background in this paper

  • ...Surprisingly, many of the bacteria which cause human disease are also essential to the human microbiome.[6] Consuming drugs alters the balance of microbe populations in the gut and may instigate a range of adverse effects while still providing treatment for specific diseases....

    [...]

Journal ArticleDOI
TL;DR: The emergence of MCR-1 heralds the breach of the last group of antibiotics, polymyxins, by plasmid-mediated resistance, in Enterobacteriaceae and emphasise the urgent need for coordinated global action in the fight against pan-drug-resistant Gram-negative bacteria.
Abstract: Summary Background Until now, polymyxin resistance has involved chromosomal mutations but has never been reported via horizontal gene transfer. During a routine surveillance project on antimicrobial resistance in commensal Escherichia coli from food animals in China, a major increase of colistin resistance was observed. When an E coli strain, SHP45, possessing colistin resistance that could be transferred to another strain, was isolated from a pig, we conducted further analysis of possible plasmid-mediated polymyxin resistance. Herein, we report the emergence of the first plasmid-mediated polymyxin resistance mechanism, MCR-1, in Enterobacteriaceae. Methods The mcr-1 gene in E coli strain SHP45 was identified by whole plasmid sequencing and subcloning. MCR-1 mechanistic studies were done with sequence comparisons, homology modelling, and electrospray ionisation mass spectrometry. The prevalence of mcr-1 was investigated in E coli and Klebsiella pneumoniae strains collected from five provinces between April, 2011, and November, 2014. The ability of MCR-1 to confer polymyxin resistance in vivo was examined in a murine thigh model. Findings Polymyxin resistance was shown to be singularly due to the plasmid-mediated mcr-1 gene. The plasmid carrying mcr-1 was mobilised to an E coli recipient at a frequency of 10 −1 to 10 −3 cells per recipient cell by conjugation, and maintained in K pneumoniae and Pseudomonas aeruginosa . In an in-vivo model, production of MCR-1 negated the efficacy of colistin. MCR-1 is a member of the phosphoethanolamine transferase enzyme family, with expression in E coli resulting in the addition of phosphoethanolamine to lipid A. We observed mcr-1 carriage in E coli isolates collected from 78 (15%) of 523 samples of raw meat and 166 (21%) of 804 animals during 2011–14, and 16 (1%) of 1322 samples from inpatients with infection. Interpretation The emergence of MCR-1 heralds the breach of the last group of antibiotics, polymyxins, by plasmid-mediated resistance. Although currently confined to China, MCR-1 is likely to emulate other global resistance mechanisms such as NDM-1. Our findings emphasise the urgent need for coordinated global action in the fight against pan-drug-resistant Gram-negative bacteria. Funding Ministry of Science and Technology of China, National Natural Science Foundation of China.

3,647 citations


"Developing New Antimicrobial Therap..." refers background in this paper

  • ...However, the plasmid-borne mcr‐1 gene provides resistance to this antibiotic and its mobile properties also lead to interspecies transfer among Gram-negative bacteria.[97] This troubling connection between extensive/total resistance, transferability of plasmid-borne resistance genes and hypervirulence in K....

    [...]

Journal Article
TL;DR: Decades after the first patients were treated with antibiotics, bacterial infections have again become a threat because of the rapid emergence of resistant bacteria-a crisis attributed to abuse of these medications and a lack of new drug development.
Abstract: Decades after the first patients were treated with antibiotics, bacterial infections have again become a threat because of the rapid emergence of resistant bacteria-a crisis attributed to abuse of these medications and a lack of new drug development.

3,147 citations


"Developing New Antimicrobial Therap..." refers background in this paper

  • ...The improper and misuse of antibiotics has resulted in the widespread development of resistance by many bacterial species.[13,14] As a consequence, two main events have occurred in parallel throughout the last century....

    [...]

Frequently Asked Questions (19)
Q1. What are the contributions mentioned in the paper "Developing new antimicrobial therapies: are synergistic combinations of plant extracts/compounds with conventional antibiotics the solution? author" ?

However, for a number of reasons discussed in this review, these strategies are unlikely to provide the same wealth of new antibiotics in the future. This study reviews the recent literature on combinational antibiotic therapies to highlight their potential and to guide future research in this field. Traditional medicine plants are likely to provide further new antibiotics in the future. 

Modified β-lactams and β-lactamase inhibitors provided effective treatment and management of the entire Enterobacteriaceae family.[10] 

Loss or modification of these outer membrane proteins may lead to antimicrobial resistance due to reduced membrane permeability and thus, reduced uptake of antibiotics.[176] 

Perhaps the best-known example of antibiotic synergy is the combination of clavulanic acid (a fungal-derived inhibitor of β-lactamase enzymes) with β-lactam antibiotics. 

The development of alternative treatment methods is crucial and considered by WHO to be perhaps the biggest challenge facing medical science. 

Around two-thirds of all ear infections are bacterial, and approximately, 85% of the cases can be resolved without the need for antibiotic treatment. 

As well as the development of efflux pumps, bacteria may also become resistant to antibiotic action by target-site modification  (preventing the binding of antibiotic) and by drug inactivation. 

80% of the developing world relies on traditional medicines derived from medicinal plants as their primary health-care modality. 

The isoflavone allows a greater concentration of berberine to accumulate in S. aureus cells by inhibiting the efflux mechanism (MDR pump). 

Plant extract/antibiotic combinations not only contribute to and enhance the overall antimicrobial effect, but can also act as resistance modifying/modulating agents. 

the ability of plant compounds to “re-purpose” conventional antibiotics in the treatment of microbial infections may significantly impact global health in terms of combatting resistant pathogenic microorganisms. 

Clavulanic acid is a weak β-lactam with negligible intrinsic antimicrobial activity on its own despite sharing a similar β-lactam ring with other β-lactam antibiotics. 

It is possible that the Petalostigma spp. extracts examined in the Ilanko et  al.[183] study may also contain an irreversible β-lactamase inhibitor which functions similarly to clavulanic acid to block the bacterial antimicrobial resistance mechanism. 

The evidence is accumulating that the use of plant extracts enhance the antibacterial activity of conventional antibiotics, serving to repurpose these compounds rather than replacing them. 

These efflux pumps are encoded chromosomally and utilized to rapidly remove antibiotics that have entered the bacterial cells, thus rendering them resistant to the effects of the antibiotic. 

MREs can be transmitted between bacteria of different phyla either directly between adjacent cells (conjugation) or indirectly by salvaging intact elements (transformation). 

of the approximately 422,000 plant species worldwide, it is estimated that only a small portion  (1%–10%) of the estimated total number of herbal medicines derived from these species have been examined for antimicrobial properties. 

A significant interaction relevant for clinical infections is the bactericidal effects on MRSA demonstrated by a variety of PBAs. 

the most recent and widely accepted method is the use of fractional inhibitory concentration index  (ΣFIC)  (derived from minimum inhibitory concentration  [MIC]) and isobologram analysis [Figure 3a] in the interpretation of synergistic results. 

Trending Questions (1)
Developing New Antimicrobial Therapies: Are Synergistic Combinations of Plant Extracts/Compounds with Conventional Antibiotics the Solution?

Synergistic combinations of plant extracts/compounds with conventional antibiotics show promise as a solution for developing new antimicrobial therapies, offering enhanced treatment options against bacterial infections.