Factor graphs and the Sum-Product Algorithm
01 Jan 2002-
About: The article was published on 2002-01-01 and is currently open access. It has received 2660 citations till now. The article focuses on the topics: Graph product & Chordal graph.
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Book•
24 Aug 2012
TL;DR: This textbook offers a comprehensive and self-contained introduction to the field of machine learning, based on a unified, probabilistic approach, and is suitable for upper-level undergraduates with an introductory-level college math background and beginning graduate students.
Abstract: Today's Web-enabled deluge of electronic data calls for automated methods of data analysis. Machine learning provides these, developing methods that can automatically detect patterns in data and then use the uncovered patterns to predict future data. This textbook offers a comprehensive and self-contained introduction to the field of machine learning, based on a unified, probabilistic approach. The coverage combines breadth and depth, offering necessary background material on such topics as probability, optimization, and linear algebra as well as discussion of recent developments in the field, including conditional random fields, L1 regularization, and deep learning. The book is written in an informal, accessible style, complete with pseudo-code for the most important algorithms. All topics are copiously illustrated with color images and worked examples drawn from such application domains as biology, text processing, computer vision, and robotics. Rather than providing a cookbook of different heuristic methods, the book stresses a principled model-based approach, often using the language of graphical models to specify models in a concise and intuitive way. Almost all the models described have been implemented in a MATLAB software package--PMTK (probabilistic modeling toolkit)--that is freely available online. The book is suitable for upper-level undergraduates with an introductory-level college math background and beginning graduate students.
8,059 citations
Cites background from "Factor graphs and the Sum-Product A..."
...2 BP on a factor graph We now derive a version of BP that sends messages on a factor graph, as proposed in (Kschischang et al. 2001)....
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...1 Factor graphs A factor graph (Kschischang et al. 2001; Frey 2003) is a graphical representation that unifies directed and undirected models, and which simplifies certain message passing algorithms....
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Book•
16 Dec 2008TL;DR: The variational approach provides a complementary alternative to Markov chain Monte Carlo as a general source of approximation methods for inference in large-scale statistical models.
Abstract: The formalism of probabilistic graphical models provides a unifying framework for capturing complex dependencies among random variables, and building large-scale multivariate statistical models. Graphical models have become a focus of research in many statistical, computational and mathematical fields, including bioinformatics, communication theory, statistical physics, combinatorial optimization, signal and image processing, information retrieval and statistical machine learning. Many problems that arise in specific instances — including the key problems of computing marginals and modes of probability distributions — are best studied in the general setting. Working with exponential family representations, and exploiting the conjugate duality between the cumulant function and the entropy for exponential families, we develop general variational representations of the problems of computing likelihoods, marginal probabilities and most probable configurations. We describe how a wide variety of algorithms — among them sum-product, cluster variational methods, expectation-propagation, mean field methods, max-product and linear programming relaxation, as well as conic programming relaxations — can all be understood in terms of exact or approximate forms of these variational representations. The variational approach provides a complementary alternative to Markov chain Monte Carlo as a general source of approximation methods for inference in large-scale statistical models.
4,335 citations
Cites background from "Factor graphs and the Sum-Product A..."
...The formalism of factor graphs provides an alternative graphical representation, one which emphasizes the factorization of the distribution [140, 154]....
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23 Jun 2013
TL;DR: This work tackles saliency detection from a scale point of view and proposes a multi-layer approach to analyze saliency cues, by finding saliency values optimally in a tree model.
Abstract: When dealing with objects with complex structures, saliency detection confronts a critical problem - namely that detection accuracy could be adversely affected if salient foreground or background in an image contains small-scale high-contrast patterns. This issue is common in natural images and forms a fundamental challenge for prior methods. We tackle it from a scale point of view and propose a multi-layer approach to analyze saliency cues. The final saliency map is produced in a hierarchical model. Different from varying patch sizes or downsizing images, our scale-based region handling is by finding saliency values optimally in a tree model. Our approach improves saliency detection on many images that cannot be handled well traditionally. A new dataset is also constructed.
1,624 citations
Cites background from "Factor graphs and the Sum-Product A..."
...(5), exact inference can be achieved via belief propagation [16]....
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IBM1
TL;DR: Simulation results show that the PEG algorithm is a powerful algorithm to generate good short-block-length LDPC codes.
Abstract: We propose a general method for constructing Tanner graphs having a large girth by establishing edges or connections between symbol and check nodes in an edge-by-edge manner, called progressive edge-growth (PEG) algorithm. Lower bounds on the girth of PEG Tanner graphs and on the minimum distance of the resulting low-density parity-check (LDPC) codes are derived in terms of parameters of the graphs. Simple variations of the PEG algorithm can also be applied to generate linear-time encodeable LDPC codes. Regular and irregular LDPC codes using PEG Tanner graphs and allowing symbol nodes to take values over GF(q) (q>2) are investigated. Simulation results show that the PEG algorithm is a powerful algorithm to generate good short-block-length LDPC codes.
1,507 citations
Cites background from "Factor graphs and the Sum-Product A..."
...INTRODUCTION CODES on graphs [1-12] 1 have attracted considerable attention owing to their capac ity- pproaching performance and low-complexity iterative decoding....
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TL;DR: A comprehensive survey of efforts in the past couple of decades to address the problems of representation, recognition, and learning of human activities from video and related applications is presented.
Abstract: The past decade has witnessed a rapid proliferation of video cameras in all walks of life and has resulted in a tremendous explosion of video content. Several applications such as content-based video annotation and retrieval, highlight extraction and video summarization require recognition of the activities occurring in the video. The analysis of human activities in videos is an area with increasingly important consequences from security and surveillance to entertainment and personal archiving. Several challenges at various levels of processing-robustness against errors in low-level processing, view and rate-invariant representations at midlevel processing and semantic representation of human activities at higher level processing-make this problem hard to solve. In this review paper, we present a comprehensive survey of efforts in the past couple of decades to address the problems of representation, recognition, and learning of human activities from video and related applications. We discuss the problem at two major levels of complexity: 1) "actions" and 2) "activities." "Actions" are characterized by simple motion patterns typically executed by a single human. "Activities" are more complex and involve coordinated actions among a small number of humans. We will discuss several approaches and classify them according to their ability to handle varying degrees of complexity as interpreted above. We begin with a discussion of approaches to model the simplest of action classes known as atomic or primitive actions that do not require sophisticated dynamical modeling. Then, methods to model actions with more complex dynamics are discussed. The discussion then leads naturally to methods for higher level representation of complex activities.
1,426 citations
References
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TL;DR: A generic message-passing algorithm, the sum-product algorithm, that operates in a factor graph, that computes-either exactly or approximately-various marginal functions derived from the global function.
Abstract: Algorithms that must deal with complicated global functions of many variables often exploit the manner in which the given functions factor as a product of "local" functions, each of which depends on a subset of the variables. Such a factorization can be visualized with a bipartite graph that we call a factor graph, In this tutorial paper, we present a generic message-passing algorithm, the sum-product algorithm, that operates in a factor graph. Following a single, simple computational rule, the sum-product algorithm computes-either exactly or approximately-various marginal functions derived from the global function. A wide variety of algorithms developed in artificial intelligence, signal processing, and digital communications can be derived as specific instances of the sum-product algorithm, including the forward/backward algorithm, the Viterbi algorithm, the iterative "turbo" decoding algorithm, Pearl's (1988) belief propagation algorithm for Bayesian networks, the Kalman filter, and certain fast Fourier transform (FFT) algorithms.
6,637 citations
TL;DR: This work explains how to obtain region-based free energy approximations that improve the Bethe approximation, and corresponding generalized belief propagation (GBP) algorithms, and describes empirical results showing that GBP can significantly outperform BP.
Abstract: Important inference problems in statistical physics, computer vision, error-correcting coding theory, and artificial intelligence can all be reformulated as the computation of marginal probabilities on factor graphs. The belief propagation (BP) algorithm is an efficient way to solve these problems that is exact when the factor graph is a tree, but only approximate when the factor graph has cycles. We show that BP fixed points correspond to the stationary points of the Bethe approximation of the free energy for a factor graph. We explain how to obtain region-based free energy approximations that improve the Bethe approximation, and corresponding generalized belief propagation (GBP) algorithms. We emphasize the conditions a free energy approximation must satisfy in order to be a "valid" or "maxent-normal" approximation. We describe the relationship between four different methods that can be used to generate valid approximations: the "Bethe method", the "junction graph method", the "cluster variation method", and the "region graph method". Finally, we explain how to tell whether a region-based approximation, and its corresponding GBP algorithm, is likely to be accurate, and describe empirical results showing that GBP can significantly outperform BP.
1,827 citations