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First passage time approach to diffusion controlled reactions

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TLDR
In this article, an inhomogeneous differential equation is derived which yields τ by simple quadrature without taking recourse to detailed cumbersome time-dependent solutions of the original Smoluchowski equation.
Abstract
Association reactions involving diffusion in one, two, and three‐dimensional finite domains governed by Smoluchowski‐type equations (e.g., interchain reaction of macromolecules, ligand binding to receptors, repressor–operator association of DNA strand) are shown to be often well described by first‐order kinetics and characterized by an average reaction (passage) time τ. An inhomogeneous differential equation is derived which, for problems with high symmetry, yields τ by simple quadrature without taking recourse to detailed cumbersome time‐dependent solutions of the original Smoluchowski equation. The cases of diffusion and nondiffusion controlled processes are included in the treatment. For reaction processes involving free diffusion and intramolecular chain motion, the validity of the passage time approximation is analyzed.

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Reaction-rate theory: fifty years after Kramers

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The protein folding 'speed limit'.

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TL;DR: By analyzing simulated data, it is shown that the resulting rates of force-induced rupture are significantly more reliable than those obtained by the widely used approach based on Bell's formula.
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Protein folding studied by single-molecule FRET.

TL;DR: Single-molecule fluorescence studies are still in their infancy and have already produced novel and important information on current issues in protein folding that has been impossible or difficult to obtain from ensemble measurements.
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Amplification and kinetics of the activation steps in phototransduction

TL;DR: The investigation of amplification in the activation steps of vertebrate phototransduction shows that kcat/Km probably exceeds 10(7) M-1 s-1 (and is likely to be higher) in both amphibian and mammalian rods, and two different analyses based upon photocurrents were developed which provide lower bounds for kcat /Km in vivo.
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