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Five phylogenetically close rice SWEET genes confer TAL effector‐mediated susceptibility to Xanthomonas oryzae pv. oryzae

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TLDR
It is predicted and validated that expression of OsSWEET14 is induced by a novel TAL effector, Tal5, from an African Xoo strain, and efficiently complemented an Xoo talC mutant, demonstrating that specific induction of OsC is the key target of TalC.
Abstract
Bacterial plant-pathogenic Xanthomonas strains translocate transcription activator-like (TAL) effectors into plant cells to function as specific transcription factors. Only a few plant target genes of TAL effectors have been identified, so far. Three plant SWEET genes encoding putative sugar transporters are known to be induced by TAL effectors from rice-pathogenic Xanthomonas oryzae pv. oryzae (Xoo). We predict and validate that expression of OsSWEET14 is induced by a novel TAL effector, Tal5, from an African Xoo strain. Artificial TAL effectors (ArtTALs) were constructed to individually target 20 SWEET orthologs in rice. They were used as designer virulence factors to study which rice SWEET genes can support Xoo virulence. The Tal5 target box differs from those of the already known TAL effectors TalC, AvrXa7 and PthXo3, which also induce expression of OsSWEET14, suggesting evolutionary convergence on key targets. ArtTALs efficiently complemented an Xoo talC mutant, demonstrating that specific induction of OsSWEET14 is the key target of TalC. ArtTALs that specifically target individual members of the rice SWEET family revealed three known and two novel SWEET genes to support bacterial virulence. Our results demonstrate that five phylogenetically close SWEET proteins, which presumably act as sucrose transporters, can support Xoo virulence. © 2013 No claim to French Government works. © 2013 New Phytologist Trust.

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Susceptibility genes 101: how to be a good host.

TL;DR: The many examples reviewed here show that S genes have the potential to be used in resistance breeding, and the side effects caused by their mutation demands a one-by-one assessment of their usefulness for application.
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SWEETs, transporters for intracellular and intercellular sugar translocation

TL;DR: Three families of transporters have been identified as key players in intercellular transport of sugars: MSTs, SUTs and SWEETs and the remaining family members await characterization, and could play roles in the gametophyte as well as other important roles in sugar transport in the plant.
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Novel insights into rice innate immunity against bacterial and fungal pathogens.

TL;DR: This review summarizes the recent progress toward understanding the recognition and signaling events that govern rice innate immunity and some of the new findings are being used for the development of effective disease control methods and genome modification tools.
References
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Journal ArticleDOI

MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

TL;DR: The newest addition in MEGA5 is a collection of maximum likelihood (ML) analyses for inferring evolutionary trees, selecting best-fit substitution models, inferring ancestral states and sequences, and estimating evolutionary rates site-by-site.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput

TL;DR: MUSCLE is a new computer program for creating multiple alignments of protein sequences that includes fast distance estimation using kmer counting, progressive alignment using a new profile function the authors call the log-expectation score, and refinement using tree-dependent restricted partitioning.
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The Universal Protein Resource (UniProt)

TL;DR: During 2004, tens of thousands of Knowledgebase records got manually annotated or updated; the UniProt keyword list got augmented by additional keywords; the documentation of the keywords and are continuously overhauling and standardizing the annotation of post-translational modifications.
Journal ArticleDOI

Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans.

TL;DR: Results demonstrate that the potentially lethal function specified by fragment B of RK2 is not necessary for replication and that at least one trans-acting function is directly involved in RK 2 replication.
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Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors

TL;DR: The functionality of a distinct type of DNA binding domain is described and allows the design ofDNA binding domains for biotechnology.
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