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Frizzled BRET sensors based on bioorthogonal labeling of unnatural amino acids reveal WNT-induced dynamics of the cysteine-rich domain.

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TLDR
In this paper, the role of WNT/FZD signaling in FZD1-10 signaling was investigated in the context of Wingless/Int-1 lipoglycoproteins (WNTs).
Abstract
Frizzleds (FZD1–10) are G protein–coupled receptors containing an extracellular cysteine-rich domain (CRD) binding Wingless/Int-1 lipoglycoproteins (WNTs). Despite the role of WNT/FZD signaling in ...

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Elucidating the Interactome of G Protein-Coupled Receptors and Receptor Activity-Modifying Proteins

TL;DR: A review of recent advances in techniques that allow the discovery of GPCR-RAMP interactions and their functional consequences and highlight prospects for future advances can be found in this paper , where the authors also provide an up-to-date list of reported G protein-coupled receptor (GPCR)-RAMP interaction based on a review of the current literature.
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Genetic code expansion to enable site‐specific bioorthogonal labeling of functional G protein‐coupled receptors in live cells

TL;DR: In this paper , a luciferase-based reporter assay was developed for site-specific bioorthogonal labeling of expressed G protein-coupled receptors (GPCRs) in live cells.
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WNT stimulation induces dynamic conformational changes in the Frizzled-Dishevelled interaction

TL;DR: In this article , ligand-dependent conformational changes in bioluminescence resonance energy transfer (BRET) between FZD5 and DVL2 were found to influence whether downstream signaling proceeds through DVL or G proteins.
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Reversible control of tetrazine bioorthogonal reactivity by naphthotube-mediated host-guest recognition

TL;DR: Hartung et al. as mentioned in this paper identified a high-affinity host-guest pair between synthetic macrocyclic naphthotubes and phenyltetrazine and developed a molecular-recognition strategy for controlling tetrazine reactions by host caging.
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Detecting and measuring of GPCR signaling – comparison of human induced pluripotent stem cells and immortal cell lines

TL;DR: In this article , a review summarizes existing resonance energy transfer and protein complementation assay technologies, as well as existing and new labeling methods for detecting GPCRs in human induced pluripotent stem cells (hiPSCs).
References
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Journal ArticleDOI

VMD: Visual molecular dynamics

TL;DR: VMD is a molecular graphics program designed for the display and analysis of molecular assemblies, in particular biopolymers such as proteins and nucleic acids, which can simultaneously display any number of structures using a wide variety of rendering styles and coloring methods.
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Polymorphic transitions in single crystals: A new molecular dynamics method

TL;DR: In this paper, a new Lagrangian formulation is introduced to make molecular dynamics (MD) calculations on systems under the most general externally applied, conditions of stress, which is well suited to the study of structural transformations in solids under external stress and at finite temperature.
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LINCS : A linear constraint solver for molecular simulations

TL;DR: Although the derivation of the algorithm is presented in terms of matrices, no matrix matrix multiplications are needed and only the nonzero matrix elements have to be stored, making the method useful for very large molecules.
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GROMACS: A message-passing parallel molecular dynamics implementation

TL;DR: A parallel message-passing implementation of a molecular dynamics program that is useful for bio(macro)molecules in aqueous environment is described and can handle rectangular periodic boundary conditions with temperature and pressure scaling.
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I-TASSER: a unified platform for automated protein structure and function prediction

TL;DR: The iterative threading assembly refinement (I-TASSER) server is an integrated platform for automated protein structure and function prediction based on the sequence- to-structure-to-function paradigm.
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