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Haematopoietic ageing through the lens of single-cell technologies.

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TLDR
In this paper, a review of recent studies that dissect haematopoietic ageing at the single-cell level is presented, focusing on the potential clinical applications of singlecell techniques in geriatric haematoietic stem cell transplantation and infection studies.
Abstract
Human lifespan is now longer than ever and, as a result, modern society is getting older. Despite that, the detailed mechanisms behind the ageing process and its impact on various tissues and organs remain obscure. In general, changes in DNA, RNA and protein structure throughout life impair their function. Haematopoietic ageing refers to the age-related changes affecting a haematopoietic system. Aged blood cells display different functional aberrations depending on their cell type, which might lead to the development of haematologic disorders, including leukaemias, anaemia or declining immunity. In contrast to traditional bulk assays, which are not suitable to dissect cell-to-cell variation, single-cell-level analysis provides unprecedented insight into the dynamics of age-associated changes in blood. In this Review, we summarise recent studies that dissect haematopoietic ageing at the single-cell level. We discuss what cellular changes occur during haematopoietic ageing at the genomic, transcriptomic, epigenomic and metabolomic level, and provide an overview of the benefits of investigating those changes with single-cell precision. We conclude by considering the potential clinical applications of single-cell techniques in geriatric haematology, focusing on the impact on haematopoietic stem cell transplantation in the elderly and infection studies, including recent COVID-19 research.

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How to Slow down the Ticking Clock: Age-Associated Epigenetic Alterations and Related Interventions to Extend Life Span

Anne-Marie Galow, +1 more
- 29 Jan 2022 - 
TL;DR: An overview on recent findings describing the epigenetic changes that arise during aging and in related maladies such as neurodegeneration and cancer is provided and the link with metabolic pathways is illustrated.
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Aging, Bone Marrow and Next-Generation Sequencing (NGS): Recent Advances and Future Perspectives

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Epithelial Cell Transformation and Senescence as Indicators of Genome Aging: Current Advances and Unanswered Questions.

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Large-scale single cell RNA sequencing atlases of human immune cells across lifespan: possibilities and challenges.

TL;DR: In this article , the authors assess the advances and challenges of large-scale data generation, analysis and reanalysis, and data dissemination for a broad range of scientific and clinical communities, and discuss FAIR data sharing and unified cell ontology languages as strategic areas for progress of the field in the near future.
References
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Journal ArticleDOI

DNA methylation-based biomarkers and the epigenetic clock theory of ageing

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Journal ArticleDOI

CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexes.

TL;DR: The structure and content of CellPhoneDB is outlined, procedures for inferring cell–cell communication networks from single-cell RNA sequencing data are provided and a practical step-by-step guide to help implement the protocol is presented.
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