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Heat stress induced Cup9 dependent transcriptional regulation of Sir2

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TLDR
The mechanism by which Sir2 is regulated under heat stress is demonstrated, which reveals that a transient heat shock causes a drastic reduction in the SIR2 transcript which results in sustained failure to initiate silencing for as long as 90 generations.
Abstract
The epigenetic writer Sir2 maintains the heterochromatin state of chromosome in three chromosomal regions, namely, the silent mating type loci, telomeres, and the ribosomal DNA (rDNA). In this study, we demonstrated the mechanism by which Sir2 is regulated under heat stress. Our study reveals that a transient heat shock causes a drastic reduction in the SIR2 transcript which results in sustained failure to initiate silencing for as long as 90 generations. Hsp82 overexpression, which is the usual outcome of heat shock treatment, leads to a similar downregulation of SIR2 transcription. Using a series of genetic experiments, we have established that heat shock or Hsp82 overexpression causes upregulation of CUP9 that, in turn, represses SIR2 transcription by binding to its upstream activator sequence. We have mapped the cis regulatory element of SIR2. Our study shows that the deletion of cup9 causes reversal of the Hsp82 overexpression phenotype and upregulation of SIR2 expression in heat-induced Hsp82-overexpressing cells. On the other hand, we found that Cup9 overexpression represses SIR2 transcription and leads to a failure in the establishment of heterochromatin. The results of our study highlight the mechanism by which environmental factors amend the epigenetic configuration of chromatin.

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Citations
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Journal ArticleDOI

Hsp90, the concertmaster: tuning transcription.

TL;DR: The role of Hsp90 is discussed in all the three aforementioned mechanisms of transcriptional control, taking examples from various model organisms with a special emphasis on cancer progression.

Quantitative Analysis of Hsp90-Client Interactions Reveals Principles of Substrate Recognition

TL;DR: The results establish HSP90 client recognition as a combinatorial process: CDC37 provides recognition of the kinase family, whereas thermodynamic parameters determine client binding within the family.
Journal ArticleDOI

Yeast epigenetics: the inheritance of histone modification states.

TL;DR: The recent advancements that for the first time provide a mechanistic understanding of how heterochromatin, dictated by histone modifications specifically, is preserved during S-phase are discussed.
Journal ArticleDOI

Hsp90 induces increased genomic instability toward DNA-damaging agents by tuning down RAD53 transcription.

TL;DR: The model organism Saccharomyces cerevisiae is used to establish that a transient heat shock and particularly the concomitant induction of Hsp90 lead to increased genomic instability via transcriptional regulation of the major checkpoint kinase Rad53.
Journal ArticleDOI

Double strand breaks may be a missing link between entropy and aging.

TL;DR: This work proposes a new model where the increase of entropy leads to the formation of double strand breaks, resulting in an aging phenotype, which not only offers a new perspective on aging research and facilitates experimental validation, but could also serve as a useful explanatory tool.
References
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Journal ArticleDOI

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

TL;DR: A new set of plasmids that serve as templates for the PCR synthesis of fragments that allow a variety of gene modifications that should further facilitate the rapid analysis of gene function in S. cerevisiae.
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Genomic expression programs in the response of yeast cells to environmental changes.

TL;DR: Analysis of genomic expression patterns in the yeast Saccharomyces cerevisiae implicated the transcription factors Yap1p, as well as Msn2p and Msn4p, in mediating specific features of the transcriptional response, while the identification of novel sequence elements provided clues to novel regulators.
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Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase

TL;DR: The analysis of two SIR2 mutations supports the idea that this deacetylase activity accounts for silencing, recombination suppression and extension of life span in vivo, and provides a molecular framework of NAD-dependent histone de acetylation that connects metabolism, genomic silencing and ageing in yeast and, perhaps, in higher eukaryotes.
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Histone deacetylases (HDACs): characterization of the classical HDAC family

TL;DR: In this paper, a comprehensive overview of the structure, function and tissue distribution of members of the classical histone deacetylase (HDAC) family, in order to gain insight into the regulation of gene expression through HDAC activity is presented.
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TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

TL;DR: The TRANSFAC® database on transcription factors, their binding sites, nucleotide distribution matrices and regulated genes as well as the complementing database TRANSCompel® on composite elements have been further enhanced on various levels.
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