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Journal ArticleDOI

Inferring synaptic excitation/inhibition balance from field potentials.

01 Sep 2017-NeuroImage (Neuroimage)-Vol. 158, pp 70-78
TL;DR: A computational model is developed to show that E:I changes can be estimated from the power law exponent (slope) of the electrophysiological power spectrum, and provides evidence thatE:I ratio may be inferred from electrophysics recordings at many spatial scales, ranging from the local field potential to surface electrocorticography.
About: This article is published in NeuroImage.The article was published on 2017-09-01 and is currently open access. It has received 397 citations till now. The article focuses on the topics: Local field potential.

Summary (3 min read)

INTRODUCTION

  • Neurons are constantly bombarded with spontaneous synaptic inputs.
  • Other methods, such as magnetic resonance spectroscopy (Henry et al. 2011) and dynamic causal modeling (DCM) (Legon et al. 2015), are able to provide much greater spatial coverage, thus enabling the sampling of E:I ratio across the brain.
  • Two recent lines of modeling work motivate their hypothesis.
  • First, it has been shown that synaptic input fluctuations during the high conductance state can be accurately modeled by a summation of two stationary stochastic processes representing excitatory and inhibitory inputs (Alvarez & Destexhe 2004).

RESULTS

  • I ratio drives 1/f changes in simulation, also known as E.
  • To model LFP under the high conductance state, the authors simulate an efferent “LFP” population receiving independent Poissonic spike trains from an excitatory and an inhibitory population .
  • Note that the current-PSDs begin decaying at different frequencies, due to the different rise and decay time constants of AMPA and GABAA conductance profiles, which have been previously observed in intracellular models of the balanced, high conductance state (Destexhe & Rudolph 2004).
  • I ratio is positively correlated with PSD slope between 30-50 Hz, also known as (F) E.

Depth-varying synapse density in rat CA1

  • To test the relationship between E:I ratio and PSD slope empirically, the authors first take advantage of the fact that excitatory and inhibitory synapse densities vary along the pyramidal dendrites in the CA1 region of the rat hippocampus (Megías et al. 2001).
  • Thus, the authors find that PSD slope significantly correlates with E:I ratio in the rat CA1, as measured by synapse density, though the effect is strongly driven by the presence of inhibition.
  • Additionally, the authors observe that high-frequency (140-230 Hz) power – a surrogate for spiking activity and ripples in the hippocampus (Schomburg et al. 2012) – is higher during theta troughs than peaks, further indicating the correspondence between LFP troughs and windows of excitation .
  • (D) Individual-channel comparison of slopes during theta troughs vs. peaks, each channel represented by a pair of connected dots showing nearly universally more negative slope during peaks compared to troughs (* p < 10-5).
  • The authors find that PSD slope dynamically tracks the stability of brain state during awake resting, followed by a rapid push towards inhibition after injection that is consistent with propofol’s time of onset (15-30 seconds), as well as the slow rebalancing during recovery from anesthesia .

DISCUSSION

  • Guided by predictions from computational modeling, their analyses of existing datasets from two mammalian species with different experimental manipulations and recording equipment demonstrate that information about local E:I ratio can be robustly captured from the spectral representation of electrophysiological signals.
  • There are several caveats in this study worth noting.
  • In addition, the authors observe that PSD slope of cortical ECoG is much more negative than that of CA1 LFP recordings, which, in turn, is lower than slopes produced by their LFP model, suggesting that anatomical differences and dendritic integration process all contribute to the measured slope (Lindén et al. 2010; Pettersen et al. 2014).

Power Law (1/f) Decay in Neural Recordings

  • Power law exponent changes of the PSD (“rotation”) have recently been observed in several empirical studies, linking it to changes in global awake and sleep states (He et al. 2010), age-related working memory decline (Voytek et al. 2015; Voytek & Knight 2015), and visuomotor task-related activation (Podvalny et al. 2015).
  • The 1/f power law nature of neural recordings has been interpreted within a self-organized criticality framework (Bak et al.
  • Instead, LFP and ECoG PSDs often have constant spectral power at low frequencies between 1-10 Hz, as well as different power law exponents at different frequencies.
  • Ultra-low frequency region (<1 Hz) was posited to exhibit 1/f decay due to recurrent network activity (Chaudhuri et al. 2016), and power law in the very high frequency (>200 Hz) was shown to be a result of stochastic fluctuations in ion channels (Diba et al. 2004).
  • The authors show that this limitation can be overcome using relatively simple metrics derived from meso- and macro-scale neural recordings, and that it can be easily applied retrospectively to existing data, opening new domains of inquiry and allowing for reanalyses within an E:I framework.

EXPERIMENTAL PROCEDURES

  • The authors simulate local field potentials under the high conductance state (Alvarez & Destexhe 2004), with the assumption that the LFP is a linear summation of total excitatory and inhibitory currents (Mazzoni et al. 2015).
  • Each spike train is convolved with their respective conductance profiles, which are modeled as a difference-of-exponentials defined by the rise and decay time constants of AMPA and GABAA receptors (Eq.1).
  • For all time series data (simulated and recorded LFP, ECoG), the PSD is estimated by computing the median of the square magnitude of the sliding window (short-time) Fourier transform (STFT).
  • Tran for invaluable discussion and comments, the Buzsáki Lab and CRCNS for their public repository of rat LFP data, and the Fujii Lab and NeuroTycho for their public repository of monkey ECoG data.
  • B.V. is supported by the University of California, San Diego, Qualcomm Institute, California Institute for Telecommunications and Information Technology, Strategic Research Opportunities Program, and a Sloan Research Fellowship.

Figure S2. Region of interest in CA1.

  • Synaptic density values corresponding to the segment of CA1 LFP data were taken from Megias et al, 2001.
  • Figure 2 shows aligned slope and E:I density variations along the depth of interest, centered on the middle of the pyramidal layer, highlighted by the gray box.
  • Both figures are identical, with only the filtered region removed for the main text for aesthetic reasons.
  • (C) Fit errors for 30-50 Hz fit are significantly greater than when fit over 40-60 Hz for majority of channels, leading to the analysis decision of choosing the latter for analysis.
  • Table S1. Multivariate Linear Model Coefficients and R2 for Slope vs. E, I, and E:I Ratio Note that univariate models produce coefficients with consistent signs (positive for E, E:I ratio; negative for I).

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Citations
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Journal ArticleDOI
TL;DR: An algorithm to parameterize electrophysiological neural power spectra as a combination of an aperiodic component and putative periodic oscillatory peaks is introduced, addressing limitations of common approaches.
Abstract: Electrophysiological signals exhibit both periodic and aperiodic properties. Periodic oscillations have been linked to numerous physiological, cognitive, behavioral and disease states. Emerging evidence demonstrates that the aperiodic component has putative physiological interpretations and that it dynamically changes with age, task demands and cognitive states. Electrophysiological neural activity is typically analyzed using canonically defined frequency bands, without consideration of the aperiodic (1/f-like) component. We show that standard analytic approaches can conflate periodic parameters (center frequency, power, bandwidth) with aperiodic ones (offset, exponent), compromising physiological interpretations. To overcome these limitations, we introduce an algorithm to parameterize neural power spectra as a combination of an aperiodic component and putative periodic oscillatory peaks. This algorithm requires no a priori specification of frequency bands. We validate this algorithm on simulated data, and demonstrate how it can be used in applications ranging from analyzing age-related changes in working memory to large-scale data exploration and analysis.

628 citations

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TL;DR: Human cortical organoids that dynamically change cellular populations during maturation and exhibited consistent increases in electrical activity over the span of several months show that the development of structured network activity in a human neocortex model may follow stable genetic programming.

388 citations


Cites background from "Inferring synaptic excitation/inhib..."

  • ...Periodic oscillatory activity is often defined as a ‘‘bump’’ over the characteristic 1/f background in the power spectral density (PSD) of extracellular signals above and beyond the aperiodic 1/f signal (Buzsáki et al., 2013; Gao et al., 2017)....

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TL;DR: A closed-loop system is used to decode and stimulate periods of ineffective encoding, showing that stimulation of lateral temporal cortex can enhance memory and suggesting that such systems may provide a therapeutic approach for treating memory dysfunction.
Abstract: Memory failures are frustrating and often the result of ineffective encoding. One approach to improving memory outcomes is through direct modulation of brain activity with electrical stimulation. Previous efforts, however, have reported inconsistent effects when using open-loop stimulation and often target the hippocampus and medial temporal lobes. Here we use a closed-loop system to monitor and decode neural activity from direct brain recordings in humans. We apply targeted stimulation to lateral temporal cortex and report that this stimulation rescues periods of poor memory encoding. This system also improves later recall, revealing that the lateral temporal cortex is a reliable target for memory enhancement. Taken together, our results suggest that such systems may provide a therapeutic approach for treating memory dysfunction.

232 citations

Posted ContentDOI
11 Apr 2018-bioRxiv
TL;DR: A novel algorithm for automatic parameterization of neural power spectral densities (PSDs) as a combination of the aperiodic signal and putative periodic oscillations is introduced, requiring no a priori specification of band limits and accounts for potentially-overlapping oscillations while minimizing the degree to which they are confounded with one another.
Abstract: Electrophysiological signals across species and recording scales exhibit both periodic and aperiodic features. Periodic oscillations have been widely studied and linked to numerous physiological, cognitive, behavioral, and disease states, while the aperiodic "background" 1/f component of neural power spectra has received far less attention. Most analyses of oscillations are conducted on a priori, canonically-defined frequency bands without consideration of the underlying aperiodic structure, or verification that a periodic signal even exists in addition to the aperiodic signal. This is problematic, as recent evidence shows that the aperiodic signal is dynamic, changing with age, task demands, and cognitive state. It has also been linked to the relative excitation/inhibition of the underlying neuronal population. This means that standard analytic approaches easily conflate changes in the periodic and aperiodic signals with one another because the aperiodic parameters--along with oscillation center frequency, power, and bandwidth--are all dynamic in physiologically meaningful, but likely different, ways. In order to overcome the limitations of traditional narrowband analyses and to reduce the potentially deleterious effects of conflating these features, we introduce a novel algorithm for automatic parameterization of neural power spectral densities (PSDs) as a combination of the aperiodic signal and putative periodic oscillations. Notably, this algorithm requires no a priori specification of band limits and accounts for potentially-overlapping oscillations while minimizing the degree to which they are confounded with one another. This algorithm is amenable to large-scale data exploration and analysis, providing researchers with a tool to quickly and accurately parameterize neural power spectra.

180 citations

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TL;DR: The spectral exponent of the resting EEG discriminated states in which consciousness was present from states where consciousness was reduced or abolished, corroborating its interpretation as a marker of the presence of consciousness.

169 citations


Cites background or methods or result from "Inferring synaptic excitation/inhib..."

  • ...In this simulation (Gao et al., 2017), lowering the E/I ratio (from 1:2 to 1:6) towards deep inhibition resulted in a steeper PSD....

    [...]

  • ...This prediction was verified in different experimental set-ups, within the same study (Gao et al., 2017)....

    [...]

  • ...Thus, propofol-induced large inhibition—mediated by GABA-A potentiation (Brown et al., 2011; Franks, 2008)—results in activity dampening (Solovey et al., 2015; Tagliazucchi et al., 2016) and in a steeper PSD decay—as indexed by a more negative spectral exponent (Gao et al., 2017)....

    [...]

  • ...The spectral exponent has been recently linked to the balance between excitation and inhibition in neuronal signalling, using one in-silico and three different in-vivo models (Gao et al., 2017)....

    [...]

  • ...Furthermore, a bolus injection of propofol resulted in temporary widespread decreases of the spectral exponent of the ECoG in macaques, with a time of onset and recovery time consistent with the loss and recovery of consciousness (Gao et al., 2017)....

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References
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TL;DR: It is shown that dynamical systems with spatial degrees of freedom naturally evolve into a self-organized critical point, and flicker noise, or 1/f noise, can be identified with the dynamics of the critical state.
Abstract: We show that dynamical systems with spatial degrees of freedom naturally evolve into a self-organized critical point. Flicker noise, or 1/f noise, can be identified with the dynamics of the critical state. This picture also yields insight into the origin of fractal objects.

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"Inferring synaptic excitation/inhib..." refers background in this paper

  • ...The 1/f power law nature of neural recordings has been interpreted within a self-organized criticality framework (Bak et al., 1987; He et al., 2010), with general anesthesia argued to alter the criticality of selforganized brain networks (Alonso et al....

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TL;DR: High-density recordings of field activity in animals and subdural grid recordings in humans can provide insight into the cooperative behaviour of neurons, their average synaptic input and their spiking output, and can increase the understanding of how these processes contribute to the extracellular signal.
Abstract: Neuronal activity in the brain gives rise to transmembrane currents that can be measured in the extracellular medium. Although the major contributor of the extracellular signal is the synaptic transmembrane current, other sources — including Na+ and Ca2+ spikes, ionic fluxes through voltage- and ligand-gated channels, and intrinsic membrane oscillations — can substantially shape the extracellular field. High-density recordings of field activity in animals and subdural grid recordings in humans, combined with recently developed data processing tools and computational modelling, can provide insight into the cooperative behaviour of neurons, their average synaptic input and their spiking output, and can increase our understanding of how these processes contribute to the extracellular signal.

3,366 citations


"Inferring synaptic excitation/inhib..." refers background in this paper

  • ...Second, population-level neural field recordings, such as the local field potential (LFP) and electrocorticography (ECoG), have been shown to be primarily dominated by postsynaptic currents (PSC) across large populations (Buzs aki et al., 2012; Mazzoni et al., 2015; Miller et al., 2009)....

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31 Jan 2002-Neuron
TL;DR: Theta oscillations represent the "on-line" state of the hippocampus and are believed to be critical for temporal coding/decoding of active neuronal ensembles and the modification of synaptic weights.

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TL;DR: Evidence is discussed from a number of systems that homeostatic synaptic plasticity is crucial for processes ranging from memory storage to activity-dependent development, and how these processes maintain stable activity states in the face of destabilizing forces is discussed.
Abstract: Activity has an important role in refining synaptic connectivity during development, in part through 'Hebbian' mechanisms such as long-term potentiation and long-term depression. However, Hebbian plasticity is probably insufficient to explain activity-dependent development because it tends to destabilize the activity of neural circuits. How can complex circuits maintain stable activity states in the face of such destabilizing forces? An idea that is emerging from recent work is that average neuronal activity levels are maintained by a set of homeostatic plasticity mechanisms that dynamically adjust synaptic strengths in the correct direction to promote stability. Here we discuss evidence from a number of systems that homeostatic synaptic plasticity is crucial for processes ranging from memory storage to activity-dependent development.

2,315 citations


"Inferring synaptic excitation/inhib..." refers background in this paper

  • ...(Turrigiano and Nelson, 2004) and the formation of neural oscillations (Atallah and Scanziani, 2009)....

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  • ...Physiologically, the balance of E:I interaction is essential for neuronal homeostasis (Turrigiano and Nelson, 2004) and the formation of neural oscillations (Atallah and Scanziani, 2009)....

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Journal ArticleDOI
TL;DR: In this paper, a model that postulates that some forms of autism are caused by an increased ratio of excitation/inhibition in sensory, mnemonic, social and emotional systems is proposed.
Abstract: Autism is a severe neurobehavioral syndrome, arising largely as an inherited disorder, which can arise from several diseases. Despite recent advances in identifying some genes that can cause autism, its underlying neurological mechanisms are uncertain. Autism is best conceptualized by considering the neural systems that may be defective in autistic individuals. Recent advances in understanding neural systems that process sensory information, various types of memories and social and emotional behaviors are reviewed and compared with known abnormalities in autism. Then, specific genetic abnormalities that are linked with autism are examined. Synthesis of this information leads to a model that postulates that some forms of autism are caused by an increased ratio of excitation/inhibition in sensory, mnemonic, social and emotional systems. The model further postulates that the increased ratio of excitation/inhibition can be caused by combinatorial effects of genetic and environmental variables that impinge upon a given neural system. Furthermore, the model suggests potential therapeutic interventions.

2,200 citations

Frequently Asked Questions (4)
Q1. What are the contributions mentioned in the paper "Inferring synaptic excitation/inhibition balance from field potentials" ?

Fluctuations in this E: I balance have been shown to influence neural computation, working memory, and information processing. This has limited the ability to examine the full impact that E: I shifts have in neural computation and disease. In this study, the authors develop a computational model to show that E: I ratio can be estimated from the power law exponent ( slope ) of the electrophysiological power spectrum, and validate this relationship using previously published datasets from two species ( rat local field potential and macaque electrocorticography ). 

Key Words: excitation-inhibition balance, local field potential, electrocorticography, power spectral density, power law, simulation, high-conductance state. 

While more drastic shifts and aberrant E:I patterns are implicated in numerous neurological and psychiatric disorders, current methods for measuring E:I dynamics require invasive procedures that are difficult to perform in behaving animals, and nearly impossible in humans. 

Richard D. Gao1,*, Erik J. Peterson1, Bradley Voytek1,2,3,41Department of Cognitive Science, 2Neurosciences Graduate Program, 3Institute for Neural Computation, and 4Kavli Institute for Brain and Mind, University of California, San Diego, La Jolla, CA, USA.*Correspondence: rigao@ucsd.eduNeural circuits sit in a dynamic balance between excitation (E) and inhibition (I).