Citations
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Journal ArticleDOI
A short history of SHELX
TL;DR: This paper could serve as a general literature citation when one or more of the open-source SH ELX programs (and the Bruker AXS version SHELXTL) are employed in the course of a crystal-structure determination.
Journal ArticleDOI
The Protein Data Bank
Helen M. Berman,John D. Westbrook,Zukang Feng,Gary L. Gilliland,Talapady N. Bhat,Helge Weissig,Ilya N. Shindyalov,Philip E. Bourne +7 more
TL;DR: The goals of the PDB are described, the systems in place for data deposition and access, how to obtain further information and plans for the future development of the resource are described.
Journal ArticleDOI
Crystal structure refinement with SHELXL
TL;DR: New features added to the refinement program SHELXL since 2008 are described and explained.
Journal ArticleDOI
Coot: model-building tools for molecular graphics.
Paul Emsley,Kevin Cowtan +1 more
TL;DR: CCP4mg is a project that aims to provide a general-purpose tool for structural biologists, providing tools for X-ray structure solution, structure comparison and analysis, and publication-quality graphics.
Journal ArticleDOI
PHENIX: a comprehensive Python-based system for macromolecular structure solution
Paul D. Adams,Paul D. Adams,Pavel V. Afonine,Gábor Bunkóczi,Vincent B. Chen,Ian W. Davis,Nathaniel Echols,Jeffrey J. Headd,Li-Wei Hung,Gary J. Kapral,Ralf W. Grosse-Kunstleve,Airlie J. McCoy,Nigel W. Moriarty,Robert D. Oeffner,Randy J. Read,David S. Richardson,Jane S. Richardson,Thomas C. Terwilliger,Peter H. Zwart +18 more
TL;DR: The PHENIX software for macromolecular structure determination is described and its uses and benefits are described.
References
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Journal ArticleDOI
Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols.
TL;DR: The X-ray structure of hen egg-white lysozyme co-crystallized in the presence of alcohols with varying hydrophobicities has been studied and it is believed that the disorder induced in the water molecules is a direct consequence of alcohol binding.
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Structure of an aliphatic amidase from Geobacillus pallidus RAPc8
TL;DR: The small size of the substrate-binding pocket also explains the specificity of this enzyme for short aliphatic amides and its asymmetry explains its enantioselectivity.
Journal ArticleDOI
Characterization and Structure of a Zn2+ and [2Fe-2S]-containing Copper Chaperone from Archaeoglobus fulgidus
Matthew H. Sazinsky,Benjamin LeMoine,Maria Orofino,Roman Davydov,Krisztina Z. Bencze,Timothy L. Stemmler,Brian M. Hoffman,José M. Argüello,Amy C. Rosenzweig +8 more
TL;DR: This unique fusion of a redox-active domain with a CXXC-containing copper chaperone domain is relevant to the evolution of copper homeostatic mechanisms and suggests new models for copper trafficking.
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Characterization of defects in mono-like silicon for photovoltaic applications using X-ray Bragg diffraction imaging.
TL;DR: The qualitative and quantitative information extracted from the reconstructed integrated intensity, FWHM and peak position maps provides clues about the initial stages of silicon growth.
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Structure and biochemical properties of fission yeast Arp2/3 complex lacking the Arp2 subunit.
Brad J. Nolen,Thomas D. Pollard +1 more
TL;DR: The role of the Arp2 subunit in the function of Arp 2/3 complex is addressed by isolating a version of the complex lacking ArP2 (Arp2Δ Arp3/3complex) from fission yeast and finding that Arp1 does not contribute to the affinity of thecomplex for Wsp1-VCA, a Schizosaccharomyces pombe nucleation-promoting factor protein.