疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A
28 Jul 2005-Vol. 32, Iss: 04, pp 190-191
TL;DR: PfPMP1）与感染红细胞、树突状组胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作�ly.
Abstract: 抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。
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References
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TL;DR: In this article, the authors used an extensive set of experimental data to analyze the performance of these transistors using the theory of heterogeneous two-dimensional percolating networks of metal-semiconducting CNTs embedded in the organic host.
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Abstract: We report theoretical predictions and measurements of the capillary force acting on a spherical colloid smaller than the capillary length that is placed on a curved fluid interface of arbitrary shape. By coupling direct imaging and interferometry, we are able to measure the in situ colloid contact angle and to correlate its position with respect to the interface curvature. Extremely tiny capillary forces down to femtonewtons can be measured with this method. Measurements agree well with a theory relating the capillary force to the gradient of Gaussian curvature and to the mean curvature of the interface prior to colloidal deposition. Numerical calculations corroborate these results.
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