On a roll for new TRF targets
Citations
489 citations
Cites background from "On a roll for new TRF targets"
...This concept is nicely exemplified in studies of the TBP-related factors (TRFs) (for reviews, see: Jones, 2007; Müller et al., 2007; Reina and Hernandez, 2007; Torres-Padilla and Tora, 2007)....
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380 citations
193 citations
Cites background from "On a roll for new TRF targets"
...The other subunits of TFIID (the TBP-associated factors or TAFs) appear to interact with INR and DPEs....
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...Leurent C, Sanders S, Ruhlmann C, Mallouh V, Weil PA, Kirschner DB, Tora L, Schultz P: Mapping histone fold TAFs within yeast TFIID....
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...In higher eukaryotes, there are multiple genes encoding TBP-related factors (TRFs) and variant TAFs [1,7]....
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140 citations
Cites background from "On a roll for new TRF targets"
...which is essential for interaction with the TATA box (reviewed in [121-123, 144-146]....
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83 citations
References
84 citations
"On a roll for new TRF targets" refers background or methods in this paper
...Among the three classes of TBP-related factors described so far, TRF2—also called TBP-like protein (TLP) or TBP-like factor (TLF)—is the only one to be widely present in metazoans (Ohbayashi et al. 1999; Kaltenbach et al. 2000; Veenstra et al. 2000)....
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...…was discovered by analysis of ESTs by several groups and, accordingly, variously named TRF2 (Rabenstein et al. 1999; Teichmann et al. 1999), TRF (Maldonado 1999), TLP (Ohbayashi et al. 1999, 2001), TLF (Kaltenbach et al. 2000; Veenstra et al. 2000), or TBPrelated protein (TRP) (Moore et al. 1999)....
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...TRF2 was discovered by analysis of ESTs by several groups and, accordingly, variously named TRF2 (Rabenstein et al. 1999; Teichmann et al. 1999), TRF (Maldonado 1999), TLP (Ohbayashi et al. 1999, 2001), TLF (Kaltenbach et al. 2000; Veenstra et al. 2000), or TBPrelated protein (TRP) (Moore et al. 1999)....
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79 citations
"On a roll for new TRF targets" refers background in this paper
...%) between TRF2 and TBP core domains suggests that they adopt the same saddle-like structure, the TBP residues required for TATA-box binding are not conserved in TRF2, suggesting that TRF2 requires other elements to bind DNA (see Berk 2000 and references therein)....
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...Since then, two more TRFs have been discovered (for review, see Berk 2000; Davidson 2003; Hochheimer and Tjian 2003), and it was found that some genes dispense with TBP and TRFs altogether (Wieczorek et al. 1998)....
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74 citations
"On a roll for new TRF targets" refers background in this paper
...Since then, two more TRFs have been discovered (for review, see Berk 2000; Davidson 2003; Hochheimer and Tjian 2003), and it was found that some genes dispense with TBP and TRFs altogether (Wieczorek et al. 1998)....
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53 citations
"On a roll for new TRF targets" refers background or result in this paper
...…by TRF2 rather than TBP. Consistent with a broad role of TRF2, TRF2-deficient flies are not viable, and partial TRF2 inactivation leads to various defects such as impaired premeiotic chromatin condensation and differentiation of male and female germ cells (Kopytova et al. 2006; Shima et al. 2007)....
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...This provides a possible mechanism for earlier observations linking TRF2 with chromatin structure (Martianov et al. 2002; Kopytova et al. 2006)....
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...This is consistent with studies in nematode, fly, fish, and frog, where inactivation of TRF2 results in a block in embryonic development and lethality (Dantonel et al. 2000; Kaltenbach et al. 2000; Veenstra et al. 2000; Bartfai et al. 2004; Kopytova et al. 2006)....
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...…however, associate with TFIIA and TFIIB (Moore et al. 1999), and in fact is found complexed with TFIIA in a HeLa cell line expressing a tagged TRF2, and with TFIIA-like factor (ALF), a TFIIA paralog expressed in male germ cells (Teichmann et al. 1999; Catena et al. 2005; Kopytova et al. 2006)....
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48 citations