PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses
Citations
19 citations
19 citations
Cites methods from "PLINK: A Tool Set for Whole-Genome ..."
...07 (Purcell et al., 2007)....
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...07 (Purcell et al., 2007) option –genome....
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...07 (Purcell et al., 2007) was used to estimate pairwise LD between SNPs....
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...07 (Purcell et al., 2007) was used to estimate pairwise LD between SNPs. r2-values over all 26 autosomes were grouped according to their physical intermarkerdistances, assuming a constant recombination rate, and were then averaged for distance bins of 50 kb....
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19 citations
19 citations
Cites methods from "PLINK: A Tool Set for Whole-Genome ..."
...For genetic analysis, linear regression was used to assess the effect of SNPs on the traits of interest using additive models in PLINK [19]....
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References
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"PLINK: A Tool Set for Whole-Genome ..." refers methods in this paper
...org The American Journal of Human Genetics Volume 81 September 2007 565 multiple-test corrections are also available, including those based on Bonferroni correction and false-discovery rate.(31) IBD estimation....
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