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Journal ArticleDOI

Potentiometric detection of DNA molecules hybridization using gene field effect transistor and intercalator

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TLDR
The results show that control of hybridization temperature and utilization of intercalator lead to more precise SNP analysis using the gene FET.
Abstract
We propose a new concept of a gene field effect transistor (FET) for detection of allele specific oligonucleotide hybridization, which is in principle based on charge density change at the gate insulator. The electrical characteristics of the gene FET were found to shift after specific binding of biomolecules at the surface of the gate insulator. Allele specific oligonucleotide hybridization and reaction between double-stranded DNA and intercalator were successfully detected with gene FETs because they have intrinsic charges in an aqueous solution. Ability to discriminate single nucleotide polymorphism (SNP) was also examined using the gene FET. Our results show that control of hybridization temperature and utilization of intercalator lead to more precise SNP analysis using the gene FET.

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Citations
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Patent

Methods and apparatus for measuring analytes using large scale fet arrays

TL;DR: In this article, a flow expansion chamber is configured to allow fluids to flow from the expansion chamber to the outlet portion and to allow the fluids to interact along the way with material in the array of wells.
Patent

Methods and apparatus for measuring analytes

TL;DR: In this article, the authors present methods and apparatus relating to FET arrays for monitoring chemical and/or biological reactions such as nucleic acid sequencing-by-synthesis reactions.
Patent

Methods and apparatus for detecting molecular interactions using FET arrays

TL;DR: In this article, methods and apparatuses relating to large-scale FET arrays for analyte detection and measurement are provided, which can be used to detect a presence and/or concentration changes of various analyte types in a wide variety of chemical and biological processes.
Patent

Apparatus and methods for performing electrochemical reactions

TL;DR: In this article, an array of electronic sensors integrated with a microwell array for confining analytes and/or particles for analytical reactions and a method for identifying microwells containing analytes or reaction byproducts is presented.
References
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PatentDOI

Expression monitoring by hybridization to high density oligonucleotide arrays

TL;DR: In this article, the authors proposed a method for monitoring the expression levels of a multiplicity of genes by hybridizing a nucleic acid sample to a high density array of oligonucleotide probes and quantifying the hybridized nucleic acids in the array.
Journal ArticleDOI

Multiplexed biochemical assays with biological chips

TL;DR: High density peptide and oligonucleotide chips are fabricated using semiconductor-based technologies and have a variety of biological applications.
Journal ArticleDOI

Ultrasensitive DNA detection using highly fluorescent bioconjugated nanoparticles.

TL;DR: A novel DNA bioanalysis method with a 0.8 fM (0.8 x 10-15 M) detection limit using a bioconjugated fluorescent nanoparticle-based sandwich assay that can effectively discriminate one-base mismatched DNA sequences.
Journal ArticleDOI

A Simple, High-Resolution Method for Establishing DNA Binding Affinity and Sequence Selectivity

TL;DR: Techniques for establishing binding constants from quantitative titrations are compared, and recommendations are made for use of a Scatchard or curve fitting analysis of the titration binding curves as a reliable means to quantitate the binding affinity.
Journal ArticleDOI

Direct detection of the hybridization of synthetic homo-oligomer dna sequences by field effect

TL;DR: In situ hybridization with complementary oligomer strands, performed at the surface of modified electrodes, is clearly reflected by negative shifts of about 100 mV in the flat-band potential of the semiconductor.
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