Stomatal and mesophyll conductances control CO2 transfer to chloroplasts in leaves of grapevine (Vitis vinifera L.)
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...In some studies the petiole is included when measuring LMA, in others it is excluded, and in others still the authors do not make clear what protocol was followed (see Supporting Information). In general, LMA including the petiole can be higher by c. 10%, but there is considerable variation across species. In this study, we used the published/measured values without conversion, and we note that this difference can be a source of error in trait–LMA relationships. Total leaf N content was typically measured with a CN analyser. Cell walls are made up of complex macromolecules consisting of pectin, hemicellulose, cellulose, lignin and structural proteins. Cell walls can be extracted by various methods such as alcohol extraction, detergent extraction and organic solvent extraction from ground samples at cold or heated temperatures (Fry, 1988). Neutral detergent fibre (NDF) is the most popular indicator of cell wall content in plant ecological studies. NDF is typically extracted from ground dried material with neutral detergent at a boiling temperature for 1 h (Van Soest, 1994). NDF represents most of the cell wall components but pectin is inevitably removed by this method. Pectin accounts for 20–35% of primary cell walls in forb species and 2–10% in graminoid species but very little of secondary cell walls (Vogel, 2008), and therefore the hot extraction method may underestimate the cell wall fraction by up to 10% of leaf mass if primary cell walls occupy 30% of leaf mass. In contrast, some starch, cuticle compounds (e.g. cutin) and some minerals (e.g. silica) may also be contained in NDF. The fraction of leaf mass in cutin is usually small (0.5–4%; Go~ ni & Hedges, 1990) and some species such as some graminoids accumulate silica up to 9% (Cooke & Leishman, 2011). In short, NDF represents a conservative estimate of cell wall mass except for some graminoid species. As it is not straightforward to convert cell wall mass data among different protocols because of variation in chemical composition among species, we used raw values without conversion in our analysis. Cell wall N is normally measured from extracted cell walls with a CN analyser (Onoda et al., 2004) or with amino acid analysis after digestion (Takashima et al., 2004). To measure cell wall N mass, it is important to extract cell walls without contamination of cytosolic proteins. In particular, cytosolic proteins can become insoluble with heat or drying or by binding with polyphenolics, and contaminate the cell wall N fraction. Therefore, oven-dried samples should not be used for quantification of cell wall N for studies of leaf economy. Fresh frozen samples may be the best for the cell wall extraction but freeze-dried samples could be used (Harrison et al., 2009). Some cell wall proteins are strongly or covalently attached to the polysaccharides while others are weakly bound to cell walls, and therefore cell wall N recovery rates depend on the strength of the solvents used (Lamport, 1965; Fry, 1988). If a weak extraction solvent is used, weakly bound cell wall proteins can be extracted, but contamination of the cell wall N fraction by cytosolic proteins will remain a concern. In contrast, when a strong solvent is used, the amount of cell wall N is underestimated because of loss of weakly bound cell wall proteins. Most data in this study were obtained with strong solvents, and therefore the value reported in this study may be a conservative estimate of cell wall N. The amount of Rubisco can be measured by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), capillary electrophoresis or immunoblotting methods (Makino et al., 1986; Warren, 2004). Some studies have also estimated the amount of Rubisco from the maximum carboxylation capacity of Rubisco by inverting the Farquhar et al. (1980) photosynthesis model (Niinemets & Tenhunen, 1997)....
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