scispace - formally typeset
Open AccessJournal ArticleDOI

Structure validation in chemical crystallography

Anthony L. Spek
- 01 Feb 2009 - 
- Vol. 65, Iss: 2, pp 148-155
Reads0
Chats0
TLDR
This paper reports on the current status of structure validation in chemical crystallography and describes the current state of research in this area.
Abstract
Automated structure validation was introduced in chemical crystallography about 12 years ago as a tool to assist practitioners with the exponential growth in crystal structure analyses. Validation has since evolved into an easy-to-use checkCIF/PLATON web-based IUCr service. The result of a crystal structure determination has to be supplied as a CIF-formatted computer-readable file. The checking software tests the data in the CIF for completeness, quality and consistency. In addition, the reported structure is checked for incomplete analysis, errors in the analysis and relevant issues to be verified. A validation report is generated in the form of a list of ALERTS on the issues to be corrected, checked or commented on. Structure validation has largely eliminated obvious problems with structure reports published in IUCr journals, such as refinement in a space group of too low symmetry. This paper reports on the current status of structure validation and possible future extensions.

read more

Content maybe subject to copyright    Report

Citations
More filters
Journal ArticleDOI

Crystal structure refinement with SHELXL

TL;DR: New features added to the refinement program SHELXL since 2008 are described and explained.
Journal ArticleDOI

SHELXT - Integrated space-group and crystal- structure determination

TL;DR: This work automates routine small-molecule structure determination starting from single-crystal reflection data, the Laue group and a reasonable guess as to which elements might be present.
Journal ArticleDOI

J. Appl. Cryst.の発刊に際して

良二 上田
Journal ArticleDOI

The Cambridge Structural Database

TL;DR: The creation, maintenance, information content and availability of the Cambridge Structural Database (CSD), the world’s repository of small molecule crystal structures, are described.
Journal ArticleDOI

PLATON SQUEEZE: a tool for the calculation of the disordered solvent contribution to the calculated structure factors

TL;DR: The SQUEEZE method is documents as an alternative means of addressing the solvent disorder issue and conveniently interfaces with the 2014 version of the least-squares refinement program SHELXL, and many twinned structures containing disordered solvents are now also treatable by SQUEEze.
References
More filters
Journal ArticleDOI

A short history of SHELX

TL;DR: This paper could serve as a general literature citation when one or more of the open-source SH ELX programs (and the Bruker AXS version SHELXTL) are employed in the course of a crystal-structure determination.
Journal ArticleDOI

On enantiomorph‐polarity estimation

TL;DR: In this article, the behaviour of the Rogers's η parameter for enantiomorph-polarity estimation is examined theoretically and experimentally on simulated intensity data for seven well-assorted compounds.
Journal ArticleDOI

J. Appl. Cryst.の発刊に際して

良二 上田
Journal ArticleDOI

Retrieval of Crystallographically-Derived Molecular Geometry Information

TL;DR: Validation experiments indicate that, with rare exceptions, search results afford precise and unbiased estimates of molecular geometrical preferences.
Journal ArticleDOI

Can X‐ray data distinguish bonding effects from vibrational smearing?

TL;DR: In this article, the success of this separation can be tested by comparison of the vibration ellipsoids of bonded atom pairs, which should have equal amplitudes in the bond direction.