The First Highly Contiguous Genome Assembly of Pikeperch (Sander lucioperca), an Emerging Aquaculture Species in Europe
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Additional excerpts
... Strong correlations between repeat content and the genome have been observed in Perciformes (Nguinkal et al., 2019)....
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...(Nguinkal et al., 2019), Triplophysa tibetana (0.1...
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... The number of protein-coding genes was similar to other Perciformes fish such as pike-perch (21 249) (Nguinkal et al., 2019), Chinese sillago (Sillago sinica, 22 122) (Zhou et al., 2018), spotted sea bass (Lateolabrax maculatus, 22 015), northern snakehead (19 877) (Liu et al.,…...
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Additional excerpts
...(Nguinkal et al., 2019), murray cod (Maccullochella peelii, 0.113...
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References
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"The First Highly Contiguous Genome ..." refers methods in this paper
...0 [36], with an e-value cutoff of 1e-6 to align these homologous protein sequences to the Sander lucioperca genome....
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"The First Highly Contiguous Genome ..." refers background in this paper
...1 [40], a splice-aware aligner, to detect splice junctions....
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