The genome of the cucumber, Cucumis sativus L.
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2,760 citations
Cites methods from "The genome of the cucumber, Cucumis..."
...Currently, using the Illumina GA sequencing technology and our short read assembler presented here, we have sequenced and assembled nearly a dozen plant and animal genomes, including the panda (Li et al. 2009d), duck, potato, cucumber (Huang et al. 2009), watermelon, and others....
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...2009d), duck, potato, cucumber (Huang et al. 2009), watermelon, and others....
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1,604 citations
Cites methods from "The genome of the cucumber, Cucumis..."
...The parasites’ nuclear genome size was estimated based on the k-mer frequency distributions of the entire data sets, respectively, as demonstrated in previous studies (44,45)....
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"The genome of the cucumber, Cucumis..." refers methods in this paper
...After the identification of syntenic blocks, the pairwise protein alignments for each gene pair were first constructed with MUSCL...
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"The genome of the cucumber, Cucumis..." refers methods in this paper
...4DTv was then calculated on concatenated nucleotide alignments with HKY substitution model...
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4,886 citations
"The genome of the cucumber, Cucumis..." refers methods in this paper
...Cucumber genome sequences were aligned with melon BAC sequences using NUCmer, a program in the MUMmer packag...
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