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The WIPI Gene Family and Neurodegenerative Diseases: Insights From Yeast and Dictyostelium Models.

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TLDR
In this article, the function of WIPIs and disease-causing mutations with a special focus on the information provided by these simple models are reviewed and compared to simple models such as the yeast Saccharomyces cerevisiae and the social amoeba Dictyostelium discoideum.
Abstract
WIPIs are a conserved family of proteins with a characteristic 7-bladed β-propeller structure. They play a prominent role in autophagy, but also in other membrane trafficking processes. Mutations in human WIPI4 cause several neurodegenerative diseases. One of them is BPAN, a rare disease characterized by developmental delay, motor disorders, and seizures. Autophagy dysfunction is thought to play an important role in this disease but the precise pathological consequences of the mutations are not well established. The use of simple models such as the yeast Saccharomyces cerevisiae and the social amoeba Dictyostelium discoideum provides valuable information on the molecular and cellular function of these proteins, but also sheds light on possible pathways that may be relevant in the search for potential therapies. Here, we review the function of WIPIs as well as disease-causing mutations with a special focus on the information provided by these simple models.

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Journal ArticleDOI

Decanoic Acid Stimulates Autophagy in D. discoideum.

TL;DR: In this article, the authors investigated the role of medium-chain fatty acids (MCFAs) in regulating autophagy and found that MCFAs can induce autophagosome formation and modulate autophagic flux in high glucose conditions.
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WIPI2 enhances the vulnerability of colorectal cancer cells to erastin via bioinformatics analysis and experimental verification

TL;DR: In this article , the effect of WIPI2 on the growth and ferroptosis of colorectal cancer (CRC) cells and its potential mechanism was investigated.
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Moving the research forward: The best of british biology using the tractable model system dictyostelium discoideum

TL;DR: The social amoeba Dictyostelium discoideum provides an excellent model for research across a broad range of disciplines within biology as mentioned in this paper, enabling multidisciplinary studies to be carried out in a wide range of areas.
Journal ArticleDOI

WIPI proteins: Biological functions and related syndromes

TL;DR: The role of WIPI proteins in autophagy is discussed first, then syndromes related to these proteins are summarized.
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Autophagy-Related Gene WD Repeat Domain 45B Promotes Tumor Proliferation and Migration of Hepatocellular Carcinoma through the Akt/mTOR Signaling Pathway

TL;DR: Wang et al. as mentioned in this paper explored the functions and mechanism of the key autophagy-related proteins, to shed light on novel clinical diagnoses and treatment targets of HCC, and found that high expression of WDR45B influenced the Akt/mTOR signaling pathway.
References
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Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum

TL;DR: It is shown that double FYVE domain–containing protein 1, a PI(3)P-binding protein with unusual localization on ER and Golgi membranes, translocates in response to amino acid starvation to a punctate compartment partially colocalized with autophagosomal proteins, which may be involved in Autophagosome biogenesis.
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Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae.

TL;DR: The results on the apg mutants suggest that autophagy via autophagic bodies is indispensable for protein degradation in the vacuoles under starvation conditions, and that at least 15 APG genes are involved inAutophagy in yeast.
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Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

Daniel J. Klionsky, +2983 more
- 08 Feb 2021 - 
TL;DR: In this article, the authors present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes.
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The Atg8 and Atg12 ubiquitin‐like conjugation systems in macroautophagy

TL;DR: The main characteristic of autophagy is the formation of a double‐membrane vesicle, the autophagosome, which envelops part of the cytoplasm and delivers it to the lysosome/vacuole for breakdown and eventual recycling of the degradation products.
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