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Journal ArticleDOI

Tractography-Based Score for Learning Effective Connectivity From Multimodal Imaging Data Using Dynamic Bayesian Networks

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TLDR
A novel anatomically informed (AI) score that evaluates fitness of a given connectivity structure to both DTI and fMRI data simultaneously is proposed that is employed in structure learning of DBN given the data.
Abstract
Objective: Effective connectivity (EC) is the methodology for determining functional-integration among the functionally active segregated regions of the brain. By definition [1] EC is “the causal influence exerted by one neuronal group on another” which is constrained by anatomical connectivity (AC) (axonal connections). AC is necessary for EC but does not fully determine it, because synaptic communication occurs dynamically in a context-dependent fashion. Although there is a vast emerging evidence of structure–function relationship using multimodal imaging studies, till date only a few studies have done joint modeling of the two modalities: functional MRI (fMRI) and diffusion tensor imaging (DTI). We aim to propose a unified probabilistic framework that combines information from both sources to learn EC using dynamic Bayesian networks (DBNs). Method: DBNs are probabilistic graphical temporal models that learn EC in an exploratory fashion. Specifically, we propose a novel anatomically informed (AI) score that evaluates fitness of a given connectivity structure to both DTI and fMRI data simultaneously. The AI score is employed in structure learning of DBN given the data. Results: Experiments with synthetic-data demonstrate the face validity of structure learning with our AI score over anatomically uninformed counterpart. Moreover, real-data results are cross-validated by performing classification-experiments. Conclusion: EC inferred on real fMRI-DTI datasets is found to be consistent with previous literature and show promising results in light of the AC present as compared to other classically used techniques such as Granger-causality. Significance: Multimodal analyses provide a more reliable basis for differentiating brain under abnormal/diseased conditions than the single modality analysis.

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Citations
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Journal ArticleDOI

Variational inference based kernel dynamic Bayesian networks for construction of prediction intervals for industrial time series with incomplete input

TL;DR: The experimental results indicate that the proposed variational inference method for the KDBN can provide reliable PIs for the generation flow of BFG and it exhibits shorter computing time than the stochastic based one.
Journal ArticleDOI

ACOEC-FD: Ant Colony Optimization for Learning Brain Effective Connectivity Networks From Functional MRI and Diffusion Tensor Imaging.

TL;DR: A new method, called ACOEC-FD, to learn EC networks from fMRI and diffusion tensor imaging (DTI) using ant colony optimization (ACO), which achieves multi-modal imaging data integration by incorporating anatomical constraint information into the heuristic function of probabilistic transition rules.
Journal ArticleDOI

Sparse Estimation of Resting-State Effective Connectivity From fMRI Cross-Spectra.

TL;DR: The presented methodology appears to be well-suited for fMRI, particularly given its lack of explicit dependence on temporal lag structure, and is readily applicable to whole-brain effective connectivity estimation.
Journal ArticleDOI

A practical analysis of sample complexity for structure learning of discrete dynamic Bayesian networks

TL;DR: Discrete Dynamic Bayesian Network (dDBN) is used in many challenging causal modelling applications, such as human brain connectivity, due to its multivariate, non-deterministic, and nonlinear capab...
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Data-Driven Approaches for Diagnosis of Incipient Faults in Cutting Arms of the Roadheader

TL;DR: Four machine learning tools are applied to address the challenge in the IFDI of cutting arms and the experimental results show that the support vector machines based on dynamic cuckoo outperform the other methods.
References
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Journal ArticleDOI

Functional connectivity in the resting brain: A network analysis of the default mode hypothesis

TL;DR: This study constitutes, to the knowledge, the first resting-state connectivity analysis of the default mode and provides the most compelling evidence to date for the existence of a cohesive default mode network.
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Dynamic causal modelling.

TL;DR: As with previous analyses of effective connectivity, the focus is on experimentally induced changes in coupling, but unlike previous approaches in neuroimaging, the causal model ascribes responses to designed deterministic inputs, as opposed to treating inputs as unknown and stochastic.
Journal ArticleDOI

Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?

TL;DR: It is shown that multi-fibre tractography offers significant advantages in sensitivity when tracking non-dominant fibre populations, but does not dramatically change tractography results for the dominant pathways.
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In vivo fiber tractography using DT-MRI data

TL;DR: Fiber tract trajectories in coherently organized brain white matter pathways were computed from in vivo diffusion tensor magnetic resonance imaging (DT‐MRI) data, and the method holds promise for elucidating architectural features in other fibrous tissues and ordered media.
Journal ArticleDOI

Characterization and propagation of uncertainty in diffusion-weighted MR imaging.

TL;DR: A fully probabilistic framework is presented for estimating local probability density functions on parameters of interest in a model of diffusion, allowing for the quantification of belief in tractography results and the estimation of the cortical connectivity of the human thalamus.
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