Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-seq.
Citations
751 citations
627 citations
392 citations
369 citations
301 citations
References
30,684 citations
"Transcriptomes of major renal colle..." refers methods in this paper
...Sequencing data quality checks were performed by using FastQC (https://www.bioinformatics. babraham.ac.uk/projects/fastqc/) followed by read alignments using STAR (39) with alignment to the mouse Ensembl genome (GRCm38.p5) and Ensembl annotation (Mus_musculus....
[...]
...Dobin A, et al. (2013) STAR: Ultrafast universal RNA-seq aligner....
[...]
...uk/projects/fastqc/) followed by read alignments using STAR (39) with alignment to the mouse Ensembl genome (GRCm38....
[...]
...The RNA-seq was the same as described by Lee et al. (2) with the following exceptions: 50-bp paired-end from Illumina HiSeq 2500 platform were aligned to mouse mm10 by STAR....
[...]
14,524 citations
"Transcriptomes of major renal colle..." refers methods in this paper
...Li B, Dewey CN (2011) RSEM: Accurate transcript quantification from RNA-Seq data with or without a reference genome....
[...]
...RSEM (40) was used for transcript abundance quantification....
[...]
5,635 citations
"Transcriptomes of major renal colle..." refers background in this paper
...Because most proteins have much longer half-lives than their respective mRNAs (33), we would expect protein levels to vary less....
[...]
5,506 citations
"Transcriptomes of major renal colle..." refers background in this paper
...Recent advances in single-cell RNA-seq (scRNA-seq) have facilitated our understanding of heterogeneous tissues like brain (4), lung (5), pancreas (6), and retina (7)....
[...]
3,365 citations