Whole-genome analyses resolve early branches in the tree of life of modern birds
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Cites methods from "Whole-genome analyses resolve early..."
...However, PartitionFinder was written before the advent of phylogenomic datasets such as those produced by sequencing whole genomes (e.g., Jarvis et al. 2014) and transcriptomes (e.g., Misof et al. 2014), and remains too slow to be practical for use with these datasets....
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1,575 citations
Cites background from "Whole-genome analyses resolve early..."
...Recent notable examples include whole genome sequencing to build a well-supported avian phylogeny (Jarvis et al. 2014) and explore gene flow in mosquitoes (Fontaine et al....
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...…to increase species sampling to examine the evolution of insects (Misof et al. 2014; Peters et al. 2017) and spiders (Fernández et al. 2014), and whole genome sequencing to build a well-supported avian phylogeny (Jarvis et al. 2014) and explore gene flow in mosquitoes (Fontaine et al. 2015)....
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1,452 citations
Cites background from "Whole-genome analyses resolve early..."
...Portion of a recently published bird species tree (Jarvis et al. 2014) annotated with gene–tree support values (blue spheres), custom node labeling...
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1,261 citations
Cites background or methods or result from "Whole-genome analyses resolve early..."
...Shown are reference trees from the original paper [5] using the coalescent-based binning (a) and...
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..., not recovering the Columbea group [5])....
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...and change among the reference trees as well [5]....
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...A set of 14,446 loci (including exons, introns, and UCEs) was used to produce two reference species trees using concatenation and using a coalescent-based method [5, 33]....
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...A dataset of 48 genomes representing all avian orders has been used to partially resolve this rapid radiation [5]....
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References
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