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Showing papers on "Biodiversity published in 2022"


Journal ArticleDOI
TL;DR: In this paper , the authors simulate potential hotspots of future viral sharing, using a phylogeographical model of the mammal-virus network, and projections of geographical range shifts for 3,139 mammal species under climate-change and land-use scenarios for the year 2070.
Abstract: At least 10,000 virus species have the ability to infect humans but, at present, the vast majority are circulating silently in wild mammals1,2. However, changes in climate and land use will lead to opportunities for viral sharing among previously geographically isolated species of wildlife3,4. In some cases, this will facilitate zoonotic spillover-a mechanistic link between global environmental change and disease emergence. Here we simulate potential hotspots of future viral sharing, using a phylogeographical model of the mammal-virus network, and projections of geographical range shifts for 3,139 mammal species under climate-change and land-use scenarios for the year 2070. We predict that species will aggregate in new combinations at high elevations, in biodiversity hotspots, and in areas of high human population density in Asia and Africa, causing the cross-species transmission of their associated viruses an estimated 4,000 times. Owing to their unique dispersal ability, bats account for the majority of novel viral sharing and are likely to share viruses along evolutionary pathways that will facilitate future emergence in humans. Notably, we find that this ecological transition may already be underway, and holding warming under 2 °C within the twenty-first century will not reduce future viral sharing. Our findings highlight an urgent need to pair viral surveillance and discovery efforts with biodiversity surveys tracking the range shifts of species, especially in tropical regions that contain the most zoonoses and are experiencing rapid warming.

232 citations


Journal ArticleDOI
Joseph A. Tobias, Catherine Sheard, Alex L. Pigot, Adam J. M. Devenish, Jingyi Yang, Ferran Sayol, Montague H. C. Neate-Clegg, Nico Alioravainen, Thomas L. Weeks, Robert A. Barber, Patrick Walkden, Hannah E. A. MacGregor, Samuel E. I. Jones, Claire Vincent, Anna G. Phillips, Nicola M. Marples, Flavia A. Montaño-Centellas, Victor Leandro-Silva, Santiago Claramunt, Bianca Darski, Benjamin G. Freeman, Tom P. Bregman, Christopher R. Cooney, Emma C. Hughes, Elliot J. R. Capp, Zoë K. Varley, Nicholas R. Friedman, H. Korntheuer, Andrea Corrales-Vargas, Christopher H. Trisos, Brian E. Weeks, Dagmar M. Hanz, Till Töpfer, Gustavo A. Bravo, Vladimír Remeš, Larissa Nowak, Lincoln Silva Carneiro, A. Moncada R., Beata Matysioková, Daniel T. Baldassarre, Alejandra Martínez-Salinas, Jared D. Wolfe, Philip Chapman, Benjamin G. Daly, Marjorie C. Sorensen, Alexander Neu, Michael A. Ford, Rebekah J. Mayhew, Luís Fábio Silveira, David J. Kelly, Nathaniel N. D. Annorbah, Henry S. Pollock, Ada Grabowska-Zhang, Jay P. McEntee, Juan Carlos T. Gonzalez, Camila G. Meneses, Marcia Muñoz, Luke L. Powell, Gabriel A. Jamie, Thomas J. Matthews, Oscar W. Johnson, Guilherme R. R. Brito, Kristof Zyskowski, Ross Crates, Michael G. Harvey, Maura Jurado Zevallos, Peter A. Hosner, Tom Bradfer-Lawrence, James M. Maley, F. Gary Stiles, Hevana Santana de Lima, Kaiya L. Provost, Moses Chibesa, Mmatjie L. Mashao, Jeffrey T. Howard, Edson Mlamba, Marcus A.H. Chua, Bicheng Li, Maria I. Gómez, Natalia C. García, Martin Päckert, Jérôme Fuchs, Jarome R. Ali, Elizabeth P. Derryberry, Monica L. Carlson, Rolly C. Urriza, Kristin E. Brzeski, Dewi M. Prawiradilaga, Matt J. Rayner, Eliot T. Miller, Rauri C. K. Bowie, René-Marie Lafontaine, R. Paul Scofield, Yingqiang Lou, Lankani Somarathna, Denis Lepage, Marshall Illif, Eike Lena Neuschulz, Mathias Templin, D. Matthias Dehling, Jacob C. Cooper, Olivier S. G. Pauwels, Kangkuso Analuddin, Jon Fjeldså, Nathalie Seddon, Paul R. Sweet, Fabrice DeClerck, Luciano Nicolás Naka, Jeffrey D. Brawn, Alexandre Aleixo, Katrin Böhning-Gaese, Carsten Rahbek, Susanne A. Fritz, Gavin H. Thomas, Matthias Schleuning 
TL;DR: The AVONET dataset as discussed by the authors contains comprehensive functional trait data for all birds, including six ecological variables, 11 continuous morphological traits, and information on range size and location, from 90,020 individuals of 11,009 extant bird species sampled from 181 countries.
Abstract: Functional traits offer a rich quantitative framework for developing and testing theories in evolutionary biology, ecology and ecosystem science. However, the potential of functional traits to drive theoretical advances and refine models of global change can only be fully realised when species-level information is complete. Here we present the AVONET dataset containing comprehensive functional trait data for all birds, including six ecological variables, 11 continuous morphological traits, and information on range size and location. Raw morphological measurements are presented from 90,020 individuals of 11,009 extant bird species sampled from 181 countries. These data are also summarised as species averages in three taxonomic formats, allowing integration with a global phylogeny, geographical range maps, IUCN Red List data and the eBird citizen science database. The AVONET dataset provides the most detailed picture of continuous trait variation for any major radiation of organisms, offering a global template for testing hypotheses and exploring the evolutionary origins, structure and functioning of biodiversity.

154 citations


Journal ArticleDOI
TL;DR: Differences in extinction rates are reviewed according to realms: marine species face significant threats but, although previous mass extinctions were largely defined by marine invertebrates, there is no evidence that the marine biota has reached the same crisis as the non-marine biota, and island species have suffered far greater rates than continental ones.
Abstract: There have been five Mass Extinction events in the history of Earth's biodiversity, all caused by dramatic but natural phenomena. It has been claimed that the Sixth Mass Extinction may be underway, this time caused entirely by humans. Although considerable evidence indicates that there is a biodiversity crisis of increasing extinctions and plummeting abundances, some do not accept that this amounts to a Sixth Mass Extinction. Often, they use the IUCN Red List to support their stance, arguing that the rate of species loss does not differ from the background rate. However, the Red List is heavily biased: almost all birds and mammals but only a minute fraction of invertebrates have been evaluated against conservation criteria. Incorporating estimates of the true number of invertebrate extinctions leads to the conclusion that the rate vastly exceeds the background rate and that we may indeed be witnessing the start of the Sixth Mass Extinction. As an example, we focus on molluscs, the second largest phylum in numbers of known species, and, extrapolating boldly, estimate that, since around AD 1500, possibly as many as 7.5–13% (150,000–260,000) of all ~2 million known species have already gone extinct, orders of magnitude greater than the 882 (0.04%) on the Red List. We review differences in extinction rates according to realms: marine species face significant threats but, although previous mass extinctions were largely defined by marine invertebrates, there is no evidence that the marine biota has reached the same crisis as the non‐marine biota. Island species have suffered far greater rates than continental ones. Plants face similar conservation biases as do invertebrates, although there are hints they may have suffered lower extinction rates. There are also those who do not deny an extinction crisis but accept it as a new trajectory of evolution, because humans are part of the natural world; some even embrace it, with a desire to manipulate it for human benefit. We take issue with these stances. Humans are the only species able to manipulate the Earth on a grand scale, and they have allowed the current crisis to happen. Despite multiple conservation initiatives at various levels, most are not species oriented (certain charismatic vertebrates excepted) and specific actions to protect every living species individually are simply unfeasible because of the tyranny of numbers. As systematic biologists, we encourage the nurturing of the innate human appreciation of biodiversity, but we reaffirm the message that the biodiversity that makes our world so fascinating, beautiful and functional is vanishing unnoticed at an unprecedented rate. In the face of a mounting crisis, scientists must adopt the practices of preventive archaeology, and collect and document as many species as possible before they disappear. All this depends on reviving the venerable study of natural history and taxonomy. Denying the crisis, simply accepting it and doing nothing, or even embracing it for the ostensible benefit of humanity, are not appropriate options and pave the way for the Earth to continue on its sad trajectory towards a Sixth Mass Extinction.

143 citations


Journal ArticleDOI
17 Mar 2022-Science
TL;DR: Hua et al. as mentioned in this paper found that the benefits of reforestation will be best achieved through the restoration of native forests rather than extensive plantation programs, with compositionally simpler, younger plantations in drier regions performing particularly poorly.
Abstract: Forest restoration is being scaled up globally to deliver critical ecosystem services and biodiversity benefits; however, there is a lack of rigorous comparison of cobenefit delivery across different restoration approaches. Through global synthesis, we used 25,950 matched data pairs from 264 studies in 53 countries to assess how delivery of climate, soil, water, and wood production services, in addition to biodiversity, compares across a range of tree plantations and native forests. Benefits of aboveground carbon storage, water provisioning, and especially soil erosion control and biodiversity are better delivered by native forests, with compositionally simpler, younger plantations in drier regions performing particularly poorly. However, plantations exhibit an advantage in wood production. These results underscore important trade-offs among environmental and production goals that policy-makers must navigate in meeting forest restoration commitments. Description Benefits of forest restoration Reforestation is promoted globally as one way to mitigate climate change through the storage of carbon in woody growth and ecosystem services such as control of soil erosion and management of water supplies. Hua et al. assessed the relative performance of plantation and native forest in achieving these goals (see the Perspective by Gurevitch). Synthesizing data from the world’s major forest biomes, they found that native forests consistently delivered better performance than plantations in the provision of the three major ecosystem services, with additional benefits for biodiversity. The discrepancy was particularly marked in in warmer and drier regions. These findings show that the benefits of reforestation will be best achieved through the restoration of native forests rather than extensive plantation programs. —AMS Critical ecosystem services and biodiversity are typically delivered more effectively by native forests than by plantations.

120 citations


Journal ArticleDOI
05 Aug 2022-Science
TL;DR: In this paper , the authors show that plant diversity increases soil organic carbon (SOC) storage by elevating carbon inputs to belowground biomass and promoting microbial necromass contribution to SOC storage.
Abstract: Grasslands store approximately one third of the global terrestrial carbon stocks and can act as an important soil carbon sink. Recent studies show that plant diversity increases soil organic carbon (SOC) storage by elevating carbon inputs to belowground biomass and promoting microbial necromass contribution to SOC storage. Climate change affects grassland SOC storage by modifying the processes of plant carbon inputs and microbial catabolism and anabolism. Improved grazing management and biodiversity restoration can provide low-cost and/or high-carbon-gain options for natural climate solutions in global grasslands. The achievable SOC sequestration potential in global grasslands is 2.3 to 7.3 billion tons of carbon dioxide equivalents per year (CO2e year−1) for biodiversity restoration, 148 to 699 megatons of CO2e year−1 for improved grazing management, and 147 megatons of CO2e year−1 for sown legumes in pasturelands. Description

100 citations


Journal ArticleDOI
LeptiCell1
TL;DR: In this article , the authors quantify changes of Amazon resilience by applying established indicators (for example, measuring lag-1 autocorrelation) to remotely sensed vegetation data with a focus on vegetation optical depth (1991-2016).
Abstract: Abstract The resilience of the Amazon rainforest to climate and land-use change is crucial for biodiversity, regional climate and the global carbon cycle. Deforestation and climate change, via increasing dry-season length and drought frequency, may already have pushed the Amazon close to a critical threshold of rainforest dieback. Here, we quantify changes of Amazon resilience by applying established indicators (for example, measuring lag-1 autocorrelation) to remotely sensed vegetation data with a focus on vegetation optical depth (1991–2016). We find that more than three-quarters of the Amazon rainforest has been losing resilience since the early 2000s, consistent with the approach to a critical transition. Resilience is being lost faster in regions with less rainfall and in parts of the rainforest that are closer to human activity. We provide direct empirical evidence that the Amazon rainforest is losing resilience, risking dieback with profound implications for biodiversity, carbon storage and climate change at a global scale.

96 citations



Journal ArticleDOI
TL;DR: This dissertation aims to provide a history of web exceptionalism from 1989 to 2002, a period chosen in order to explore its roots as well as specific cases up to and including the year in which descriptions of “Web 2.0” began to circulate.
Abstract: Harris A. Lewin , Stephen Richards , Erez Lieberman Aiden, Miguel L. Allende , John M. Archibald, Mikl os B alint, Katharine B. Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L. Blaxter , Jing Cai, Nicolette D. Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K. Childers, Jonathan A. Coddington , Dalia A. Conde , Montserrat Corominas , Keith A. Crandall , Andrew J. Crawford, Federica DiPalma, Richard Durbin , ThankGod E. Ebenezer, Scott V. Edwards , Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A. Gibbs, M. Thomas P. Gilbert , Melissa M. Goldstein, Jennifer Marshall Graves , Henry T. Greely , Igor V. Grigoriev , Kevin J. Hackett, Neil Hall, David Haussler, Kristofer M. Helgen, Carolyn J. Hogg , Sachiko Isobe, Kjetill Sigurd Jakobsen , Axel Janke , Erich D. Jarvis, Warren E. Johnson , Steven J. M. Jones, Elinor K. Karlsson , Paul J. Kersey, Jin-Hyoung Kim, W. John Kress , Shigehiro Kuraku, Mara K. N. Lawniczak, James H. Leebens-Mack , Xueyan Li, Kerstin Lindblad-Toh , Xin Liu, Jose V. Lopez, Tomas Marques-Bonet , Sophie Mazard, Jonna A. K. Mazet , Camila J. Mazzoni, Eugene W. Myers , Rachel J. O’Neill, Sadye Paez, Hyun Park, Gene E. Robinson , Cristina Roquet , Oliver A. Ryder , Jamal S. M. Sabir , H. Bradley Shaffer , Timothy M. Shank, Jacob S. Sherkow , Pamela S. Soltis , Boping Tang , Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L. Wilson, Xun Xu, Huanming Yang, Anne D. Yoder , and Guojie Zhang

83 citations


Journal ArticleDOI
TL;DR: In this paper , a comprehensive extinction risk assessment of reptiles is presented, which shows that at least 1,829 out of 10,196 species (21.1%) are threatened and represents 15.6 billion years of phylogenetic diversity.
Abstract: Abstract Comprehensive assessments of species’ extinction risks have documented the extinction crisis 1 and underpinned strategies for reducing those risks 2 . Global assessments reveal that, among tetrapods, 40.7% of amphibians, 25.4% of mammals and 13.6% of birds are threatened with extinction 3 . Because global assessments have been lacking, reptiles have been omitted from conservation-prioritization analyses that encompass other tetrapods 4–7 . Reptiles are unusually diverse in arid regions, suggesting that they may have different conservation needs 6 . Here we provide a comprehensive extinction-risk assessment of reptiles and show that at least 1,829 out of 10,196 species (21.1%) are threatened—confirming a previous extrapolation 8 and representing 15.6 billion years of phylogenetic diversity. Reptiles are threatened by the same major factors that threaten other tetrapods—agriculture, logging, urban development and invasive species—although the threat posed by climate change remains uncertain. Reptiles inhabiting forests, where these threats are strongest, are more threatened than those in arid habitats, contrary to our prediction. Birds, mammals and amphibians are unexpectedly good surrogates for the conservation of reptiles, although threatened reptiles with the smallest ranges tend to be isolated from other threatened tetrapods. Although some reptiles—including most species of crocodiles and turtles—require urgent, targeted action to prevent extinctions, efforts to protect other tetrapods, such as habitat preservation and control of trade and invasive species, will probably also benefit many reptiles.

75 citations


Journal ArticleDOI
TL;DR: In this paper , the authors contribute to filling this knowledge gap by combining spatially explicit projections of urban expansion under shared socioeconomic pathways (SSPs) with datasets on habitat and terrestrial biodiversity (amphibians, mammals, and birds).
Abstract: Rapid urban expansion has profound impacts on global biodiversity through habitat conversion, degradation, fragmentation, and species extinction. However, how future urban expansion will affect global biodiversity needs to be better understood. We contribute to filling this knowledge gap by combining spatially explicit projections of urban expansion under shared socioeconomic pathways (SSPs) with datasets on habitat and terrestrial biodiversity (amphibians, mammals, and birds). Overall, future urban expansion will lead to 11-33 million hectares of natural habitat loss by 2100 under the SSP scenarios and will disproportionately cause large natural habitat fragmentation. The urban expansion within the current key biodiversity priority areas is projected to be higher (e.g., 37-44% higher in the WWF's Global 200) than the global average. Moreover, the urban land conversion will reduce local within-site species richness by 34% and species abundance by 52% per 1 km grid cell, and 7-9 species may be lost per 10 km cell. Our study suggests an urgent need to develop a sustainable urban development pathway to balance urban expansion and biodiversity conservation.

66 citations


Journal ArticleDOI
20 May 2022-Science
TL;DR: Feng et al. as mentioned in this paper used a global dataset of matched single-species and multispecies plantations to evaluate the impact of multi-species tree planting on stand growth.
Abstract: Multispecies tree planting has long been applied in forestry and landscape restoration in the hope of providing better timber production and ecosystem services; however, a systematic assessment of its effectiveness is lacking. We compiled a global dataset of matched single-species and multispecies plantations to evaluate the impact of multispecies planting on stand growth. Average tree height, diameter at breast height, and aboveground biomass were 5.4, 6.8, and 25.5% higher, respectively, in multispecies stands compared with single-species stands. These positive effects were mainly the result of interspecific complementarity and were modulated by differences in leaf morphology and leaf life span, stand age, planting density, and temperature. Our results have implications for designing afforestation and reforestation strategies and bridging experimental studies of biodiversity–ecosystem functioning relationships with real-world practices. Description Diversity boosts plantation biomass Across experimental and natural systems, more diverse plant communities often have higher primary productivity. This effect can be due to complementarity between different species, which can more effectively use resources together, or a higher likelihood of more productive species being present. Feng et al. used data from 255 sites to test whether forest plantations with multiple species have greater productivity than monocultures (see the Perspective by Gurevitch). They found that multispecies plantings, on average, have taller and thicker trees and greater aboveground biomass accumulation than monocultures. This effect was mainly due to complementary between species, with greatest benefits from pairing species with different traits. —BEL Mixtures of tree species tend to grow better timber than monocultures, especially when species have complementary traits.

Journal ArticleDOI
Roberto Cazzolla Gatti, Peter B. Reich, Javier G. P. Gamarra, Thomas W. Crowther, Cang Hui, Albert Morera, Jean-François Bastin, S. de-Miguel, Gert-Jan Nabuurs, Jens-Christian Svenning, Josep M. Serra-Diaz, Cory Merow, Brian J. Enquist, Maria E. Kamenetsky, Junho Lee, Jun Zhu, Jinyun Fang, Douglass F. Jacobs, Bryan C. Pijanowski, Arindam Banerjee, Robert Giaquinto, Giorgio Alberti, Angelica M. Almeyda Zambrano, Esteban Álvarez-Dávila, Alejandro Araujo-Murakami, Valerio Avitabile, Gerardo Aymard, Radomir Bałazy, Christopher Baraloto, Jorcely Barroso, Meredith L. Bastian, Philippe Birnbaum, Robert Bitariho, Jan Bogaert, Frans Bongers, Olivier Bouriaud, Pedro H. S. Brancalion, Francis Q. Brearley, Eben N. Broadbent, Filippo Bussotti, Wendeson Castro da Silva, Ricardo Gomes César, Goran Cesljar, Victor Chama Moscoso, Han Y. H. Chen, Emil Cienciala, Connie J. Clark, David A. Coomes, Selvadurai Dayanandan, Mathieu Decuyper, Laura E. Dee, Jhon del Aguila Pasquel, Géraldine Derroire, Marie Noël Kamdem Djuikouo, Tran Van Do, Jiří Doležal, Ilija Đorđević, Julien Engel, Tom M. Fayle, Ted R. Feldpausch, Jonas Fridman, David Harris, Andreas Hemp, Geerten M. Hengeveld, Bruno Hérault, Martin Herold, Thomas Ibanez, Andrzej M. Jagodziński, Bogdan Jaroszewicz, Kathryn J. Jeffery, Vivian Kvist Johannsen, Tommaso Jucker, Ahto Kangur, Victor Karminov, Kuswata Kartawinata, Deborah K. Kennard, Sebastian Kepfer-Rojas, Gunnar Keppel, Mohammed Latif Khan, P. K. Khare, Timothy J Kileen, Hyun-Seok Kim, Henn Korjus, Amit Kumar, Ashwani Kumar, Diana Laarmann, Nicolas Labrière, Mait Lang, Simon L. Lewis, Natalia Lukina, Brian S. Maitner, Yadvinder Malhi, Andrew R. Marshall, Olga Martynenko, Abel Monteagudo Mendoza, P. V. Ontikov, Edgar Ortiz-Malavasi, Nadir Pallqui Camacho, Alain Paquette, Minjee Park, Narayanaswamy Parthasarathy, Pablo Luis Peri, Pascal Petronelli, Sebastian Pfautsch, Oliver L. Phillips, Nicolas Picard, Daniel Piotto, Lourens Poorter, John R. Poulsen, Hans Pretzsch, Hirma Ramírez-Angulo, Zorayda Restrepo Correa, Mirco Rodeghiero, Rocío del Pilar Rojas Gonzáles, Samir Gonçalves Rolim, Francesco Rovero, Ervan Rutishauser, Purabi Saikia, Christian Salas-Eljatib, Dmitry Schepaschenko, Michael Scherer-Lorenzen, Vladimír Šebeň, Marcos Silveira, Ferry Slik, Bonaventure Sonké, Alexandre F. Souza, Krzysztof Stereńczak, Miroslav Svoboda, Hermann Taedoumg, Nadja TchebakovaN. Tchebakova, John Terborgh, Elena B. Tikhonova, Armando Torres-Lezama, F. van der Plas, R. Vásquez, Helder Viana, Alexander Christian Vibrans, Emilio Vilanova, Vincent A. Vos, Hua-Feng Wang, Bertil Westerlund, Lee J. T. White, Susan K. Wiser, Tomasz Zawiła-Niedźwiecki, Lise Zemagho, Zhiyuan Zhu, Irie Casimir Zo-Bi, Jing-Dan Liang 
TL;DR: In this paper , a ground-sourced global database was used to estimate the number of tree species at biome, continental, and global scales, with most undiscovered species being rare, continentally endemic, and tropical or subtropical.
Abstract: Significance Tree diversity is fundamental for forest ecosystem stability and services. However, because of limited available data, estimates of tree diversity at large geographic domains still rely heavily on published lists of species descriptions that are geographically uneven in coverage. These limitations have precluded efforts to generate a global perspective. Here, based on a ground-sourced global database, we estimate the number of tree species at biome, continental, and global scales. We estimated a global tree richness (≈73,300) that is ≈14% higher than numbers known today, with most undiscovered species being rare, continentally endemic, and tropical or subtropical. These results highlight the vulnerability of global tree species diversity to anthropogenic changes. One of the most fundamental questions in ecology is how many species inhabit the Earth. However, due to massive logistical and financial challenges and taxonomic difficulties connected to the species concept definition, the global numbers of species, including those of important and well-studied life forms such as trees, still remain largely unknown. Here, based on global ground-sourced data, we estimate the total tree species richness at global, continental, and biome levels. Our results indicate that there are ∼73,000 tree species globally, among which ∼9,000 tree species are yet to be discovered. Roughly 40% of undiscovered tree species are in South America. Moreover, almost one-third of all tree species to be discovered may be rare, with very low populations and limited spatial distribution (likely in remote tropical lowlands and mountains). These findings highlight the vulnerability of global forest biodiversity to anthropogenic changes in land use and climate, which disproportionately threaten rare species and thus, global tree richness.

Journal ArticleDOI
TL;DR: In this article , the authors assess current research gaps and present a research agenda to guide future studies, focusing on global and landscape-scale processes, functional approaches, genetic and molecular levels, and eco-evolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation.
Abstract: The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and eco-evolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

Journal ArticleDOI
TL;DR: In this article , the authors find that up to 855 species are directly threatened due to unmitigated urbanization in sub-Saharan Africa, South America, Mesoamerica, and Southeast Asia.
Abstract: Significance Understanding the impacts of urbanization and the associated urban land expansion on species is vital for informed urban planning that minimizes biodiversity loss. Predicting habitat that will be lost to urban land expansion for over 30,000 species under three different future scenarios, we find that up to 855 species are directly threatened due to unmitigated urbanization. Our projections pinpoint rapidly urbanizing regions of sub-Saharan Africa, South America, Mesoamerica, and Southeast Asia where, without careful planning, urbanization is expected to cause particularly large biodiversity loss. Our findings highlight the urgent need for an increased focus on urban land in global conservation strategies and identify high-priority areas for this engagement.

Journal ArticleDOI
TL;DR: In this paper , the authors used airborne eDNA to detect 49 vertebrate species spanning 26 orders and 37 families: 30 mammal, 13 bird, 4 fish, 1 amphibian, and 1 reptile species.

Journal ArticleDOI
TL;DR: A meta-analysis of available studies comparing traditional methods and DNA metabarcoding to measure and assess biological diversity of key aquatic groups, including plankton, microphytobenthos, macroinvertebrates, and fish, was performed in this paper .
Abstract: DNA metabarcoding is increasingly used for the assessment of aquatic communities, and numerous studies have investigated the consistency of this technique with traditional morpho‐taxonomic approaches. These individual studies have used DNA metabarcoding to assess diversity and community structure of aquatic organisms both in marine and freshwater systems globally over the last decade. However, a systematic analysis of the comparability and effectiveness of DNA‐based community assessment across all of these studies has hitherto been lacking. Here, we performed the first meta‐analysis of available studies comparing traditional methods and DNA metabarcoding to measure and assess biological diversity of key aquatic groups, including plankton, microphytobentos, macroinvertebrates, and fish. Across 215 data sets, we found that DNA metabarcoding provides richness estimates that are globally consistent to those obtained using traditional methods, both at local and regional scale. DNA metabarcoding also generates species inventories that are highly congruent with traditional methods for fish. Contrastingly, species inventories of plankton, microphytobenthos and macroinvertebrates obtained by DNA metabarcoding showed pronounced differences to traditional methods, missing some taxa but at the same time detecting otherwise overseen diversity. The method is generally sufficiently advanced to study the composition of fish communities and replace more invasive traditional methods. For smaller organisms, like macroinvertebrates, plankton and microphytobenthos, DNA metabarcoding may continue to give complementary rather than identical estimates compared to traditional approaches. Systematic and comparable data collection will increase the understanding of different aspects of this complementarity, and increase the effectiveness of the method and adequate interpretation of the results.

Journal ArticleDOI
TL;DR: In this article , the authors explore how 1,506 protected areas have affected the trajectories of 27,055 waterbird populations across the globe using a robust before-after control-intervention study design, which compares protected and unprotected populations in the years before and after protection.
Abstract: International policy is focused on increasing the proportion of the Earth's surface that is protected for nature1,2. Although studies show that protected areas prevent habitat loss3-6, there is a lack of evidence for their effect on species' populations: existing studies are at local scale or use simple designs that lack appropriate controls7-13. Here we explore how 1,506 protected areas have affected the trajectories of 27,055 waterbird populations across the globe using a robust before-after control-intervention study design, which compares protected and unprotected populations in the years before and after protection. We show that the simpler study designs typically used to assess protected area effectiveness (before-after or control-intervention) incorrectly estimate effects for 37-50% of populations-for instance misclassifying positively impacted populations as negatively impacted, and vice versa. Using our robust study design, we find that protected areas have a mixed impact on waterbirds, with a strong signal that areas managed for waterbirds or their habitat are more likely to benefit populations, and a weak signal that larger areas are more beneficial than smaller ones. Calls to conserve 30% of the Earth's surface by 2030 are gathering pace14, but we show that protection alone does not guarantee good biodiversity outcomes. As countries gather to agree the new Global Biodiversity Framework, targets must focus on creating and supporting well-managed protected and conserved areas that measurably benefit populations.

Journal ArticleDOI
18 Feb 2022-Science
TL;DR: In this article , the authors use multiobjective optimization to identify portfolios of sites that simultaneously minimize impacts on river flow, river connectivity, sediment transport, fish diversity, and greenhouse gas emissions while achieving energy production goals.
Abstract: Proposed hydropower dams at more than 350 sites throughout the Amazon require strategic evaluation of trade-offs between the numerous ecosystem services provided by Earth’s largest and most biodiverse river basin. These services are spatially variable, hence collective impacts of newly built dams depend strongly on their configuration. We use multiobjective optimization to identify portfolios of sites that simultaneously minimize impacts on river flow, river connectivity, sediment transport, fish diversity, and greenhouse gas emissions while achieving energy production goals. We find that uncoordinated, dam-by-dam hydropower expansion has resulted in forgone ecosystem service benefits. Minimizing further damage from hydropower development requires considering diverse environmental impacts across the entire basin, as well as cooperation among Amazonian nations. Our findings offer a transferable model for the evaluation of hydropower expansion in transboundary basins. Description Planning for Amazonian hydropower Hydropower projects are proliferating in many parts of the world. The benefits they bring in electricity supply are often offset by environmental costs. In an international collaboration, Flecker et al. present a study that aims to optimize the retention of ecosystem services in the face of hydropower expansion in the Amazon basin (see the Perspective by Holtgrieve and Arias). The authors found that simultaneous consideration of multiple criteria (sediment transport, river connectivity, flow regulation, fish biodiversity, and greenhouse gas emissions) is necessary for optimizing the size and location of dams, and that the geographical scale of planning is also key (benefits from a smaller-scale plan may be detrimental at the basin scale). Their computational method allows the evaluation of each trade-off individually or all trade-offs simultaneously and is broadly applicable in other basin settings. —AMS Computational advances reveal opportunities for more sustainable hydropower development in large transboundary river basins.


Journal ArticleDOI
24 Feb 2022-iMeta
TL;DR: Zhang et al. as mentioned in this paper used a cross-biome observational study with an experimental microcosm study to reveal the major roles of biotic factors in determining soil bacterial biogeography and community assembly in complex terrestrial ecosystems of arid regions of northwest China.
Abstract: Revealing the roles of biotic factors in driving community assembly, which is crucial for the understanding of biodiversity and ecosystem functions, is a fundamental but infrequently investigated subject in microbial ecology. Here, combining a cross-biome observational study with an experimental microcosm study, we provided evidence to reveal the major roles of biotic factors (i.e., soil fungi and cross-kingdom species associations) in determining soil bacterial biogeography and community assembly in complex terrestrial ecosystems of the arid regions of northwest China. The results showed that the soil fungal richness mediates the balance of assembly processes of bacterial communities, and stochastic assembly processes decreased with increasing fungal richness. Our results further suggest that the predicted increase in aridity conditions due to climate change will reduce bacterial α-diversity, particularly in desert soils and subsurface layer, and induce more negative species associations. Together, our study represents a significant advance in linking soil fungi to the mechanisms underlying bacterial biogeographic patterns and community assembly in arid ecosystems under climate aridity and land-use change scenarios.

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TL;DR: This article examined the effects of warming, altered precipitation and annual biomass removal on grassland soil bacterial, fungal and protistan communities over 7 years to determine how these representative climate changes impact microbial biodiversity and ecosystem functioning.
Abstract: Anthropogenic climate change threatens ecosystem functioning. Soil biodiversity is essential for maintaining the health of terrestrial systems, but how climate change affects the richness and abundance of soil microbial communities remains unresolved. We examined the effects of warming, altered precipitation and annual biomass removal on grassland soil bacterial, fungal and protistan communities over 7 years to determine how these representative climate changes impact microbial biodiversity and ecosystem functioning. We show that experimental warming and the concomitant reductions in soil moisture play a predominant role in shaping microbial biodiversity by decreasing the richness of bacteria (9.6%), fungi (14.5%) and protists (7.5%). Our results also show positive associations between microbial biodiversity and ecosystem functional processes, such as gross primary productivity and microbial biomass. We conclude that the detrimental effects of biodiversity loss might be more severe in a warmer world.

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TL;DR: The authors provided a synthesis of Andean vascular plant diversity by estimating a list of all species with publicly available records, which they integrated with a phylogenetic dataset of 14 501 Neotropical plant species in 194 clades.

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TL;DR: In this paper , the authors show that land/sea use change has been the dominant direct driver of recent biodiversity loss worldwide, while direct exploitation of natural resources ranks second and pollution third; climate change and invasive alien species have been significantly less important than the top two drivers.
Abstract: Effective policies to halt biodiversity loss require knowing which anthropogenic drivers are the most important direct causes. Whereas previous knowledge has been limited in scope and rigor, here we statistically synthesize empirical comparisons of recent driver impacts found through a wide-ranging review. We show that land/sea use change has been the dominant direct driver of recent biodiversity loss worldwide. Direct exploitation of natural resources ranks second and pollution third; climate change and invasive alien species have been significantly less important than the top two drivers. The oceans, where direct exploitation and climate change dominate, have a different driver hierarchy from land and fresh water. It also varies among types of biodiversity indicators. For example, climate change is a more important driver of community composition change than of changes in species populations. Stopping global biodiversity loss requires policies and actions to tackle all the major drivers and their interactions, not some of them in isolation.

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TL;DR: The European Union (EU) has committed to an ambitious biodiversity recovery plan in its Biodiversity Strategy for 2030 and the Green Deal, focusing on restoring degraded habitats, extending the network of protected areas (PAs), and improving the effectiveness of management, governance, and funding as mentioned in this paper.

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TL;DR: The European Union (EU) has committed to an ambitious biodiversity recovery plan in its Biodiversity Strategy for 2030 and the Green Deal, focusing on restoring degraded habitats, extending the network of protected areas (PAs), and improving the effectiveness of management, governance, and funding as discussed by the authors .

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03 Jun 2022-Science
TL;DR: In this paper , the minimum land area needed to secure important biodiversity areas, ecologically intact areas, and optimal locations for representation of species ranges and ecoregions is estimated.
Abstract: Ambitious conservation efforts are needed to stop the global biodiversity crisis. In this study, we estimate the minimum land area to secure important biodiversity areas, ecologically intact areas, and optimal locations for representation of species ranges and ecoregions. We discover that at least 64 million square kilometers (44% of terrestrial area) would require conservation attention (ranging from protected areas to land-use policies) to meet this goal. More than 1.8 billion people live on these lands, so responses that promote autonomy, self-determination, equity, and sustainable management for safeguarding biodiversity are essential. Spatially explicit land-use scenarios suggest that 1.3 million square kilometers of this land is at risk of being converted for intensive human land uses by 2030, which requires immediate attention. However, a sevenfold difference exists between the amount of habitat converted in optimistic and pessimistic land-use scenarios, highlighting an opportunity to avert this crisis. Appropriate targets in the Post-2020 Global Biodiversity Framework to encourage conservation of the identified land would contribute substantially to safeguarding biodiversity.

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TL;DR: In this article , the authors examined mercury deposition and storage in an area of the Peruvian Amazon heavily impacted by artisanal gold mining and found substantial mercury accumulation in soils, biomass, and resident songbirds in some of the Amazon's most protected and biodiverse areas.
Abstract: Mercury emissions from artisanal and small-scale gold mining throughout the Global South exceed coal combustion as the largest global source of mercury. We examined mercury deposition and storage in an area of the Peruvian Amazon heavily impacted by artisanal gold mining. Intact forests in the Peruvian Amazon near gold mining receive extremely high inputs of mercury and experience elevated total mercury and methylmercury in the atmosphere, canopy foliage, and soils. Here we show for the first time that an intact forest canopy near artisanal gold mining intercepts large amounts of particulate and gaseous mercury, at a rate proportional with total leaf area. We document substantial mercury accumulation in soils, biomass, and resident songbirds in some of the Amazon's most protected and biodiverse areas, raising important questions about how mercury pollution may constrain modern and future conservation efforts in these tropical ecosystems.

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TL;DR: Zhang et al. as mentioned in this paper evaluated the ecological network in the Three-North Shelterbelt (TNS) region from a policy-driven perspective (i.e., nature reserves).

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TL;DR: Zhang et al. as discussed by the authors evaluated the ecological network in the Three-North Shelterbelt (TNS) region from a policy-driven perspective (i.e., nature reserves).

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TL;DR: The current perception that climate change is the principal threat to biodiversity is at best premature, and it detracts focus and effort from the primary threats: habitat destruction and overexploitation as mentioned in this paper .
Abstract: The current perception that climate change is the principal threat to biodiversity is at best premature. Although highly relevant, it detracts focus and effort from the primary threats: habitat destruction and overexploitation. We collated causes of vertebrate extinctions since 1900, threat information for amphibia, birds, and mammals from the IUCN Red List, and scrutinized others’ attempts to compare climate change with commensurate anthropogenic threats. In each analysis, none of the arguments founded on climate change's wide‐ranging effects are as urgent for biodiversity as those for habitat loss and overexploitation. Present conservation efforts must refocus on these issues. Conserving ecosystems by focusing on these major threats not only protects biodiversity but is the only available, economically viable, global strategy to reverse climate change.