Biofilm matrix

About: Biofilm matrix is a research topic. Over the lifetime, 1589 publications have been published within this topic receiving 110140 citations.

Classification of Clinical Isolates of Klebsiella pneumoniae Based on Their in vitro Biofilm Forming Capabilities and Elucidation of the Biofilm Matrix Chemistry With Special Reference to the Protein Content

Abstract: Klebsiella pneumoniae is a human pathogen, capable of forming biofilms on abiotic and biotic surfaces. The limitations of the therapeutic options against Klebsiella pneumoniae is actually due to its innate capabilities to form biofilm and harboring determinants of multidrug resistance. We utilized a newer approach for classification of biofilm producing Klebsiella pneumoniae isolates and subsequently we evaluated the chemistry of its slime, more accurately its biofilm. We extracted and determined the amount of polysaccharides and proteins from representative bacterial biofilms. The spatial distribution of sugars and proteins were then investigated in the biofilm matrix using confocal laser scanning microscopy (CLSM). Thereafter, the extracted matrix components were subjected to sophisticated analysis incorporating Fourier transform infrared (FTIR) spectroscopy, nuclear magnetic resonance (NMR) spectroscopy, one-dimensional gel-based electrophoresis (SDS-PAGE), high performance liquid chromatography (HPLC), and MALDI MS/MS analysis. Besides, the quantification of its total proteins, total sugars, uronates, total acetyl content was also done. Results suggest sugars are not the only/major constituent of its biofilms. The proteins were harvested and subjected to SDS-PAGE which revealed various common and unique protein bands. The common band was excised and analyzed by HPLC. MALDI MS/MS results of this common protein band indicated the presence of different proteins within the biofilm. The 55 different proteins were identified including both cytosolic and membrane proteins. About 22 proteins were related to protein synthesis and processing while 15 proteins were identified related to virulence. Similarly, proteins related to energy and metabolism were 8 and those related to capsule and cell wall synthesis were 4. These results will improve our understanding of Klebsiella biofilm composition and will further help us design better strategies for controlling its biofilm such as techniques focused on weakening/targeting certain portions of the slime which is the most common building block of the biofilm matrix.

Mercury bioavailability, transformations, and effects on freshwater biofilms.

Abstract: Mercury (Hg) compounds represent an important risk to aquatic ecosystems because of their persistence, bioaccumulation, and biomagnification potential. In the present review, we critically examine state-of-the-art studies on the interactions of Hg compounds with freshwater biofilms, with an emphasis on Hg accumulation, transformations, and effects. Freshwater biofilms contain both primary producers (e.g., algae) and decomposers (e.g., bacteria and fungi), which contribute to both aquatic food webs and the microbial loop. Hence they play a central role in shallow water and streams, and also contribute to Hg trophic transfer through their consumption. Both inorganic and methylated mercury compounds accumulate in biofilms, which could transform them mainly by methylation, demethylation, and reduction. Accumulated Hg compounds could induce diverse metabolic and physiological perturbations in the microorganisms embedded in the biofilm matrix and affect their community composition. The bioavailability of Hg compounds, their transformations, and their effects depend on their concentrations and speciation, ambient water characteristics, biofilm matrix composition, and microorganism-specific characteristics. The basic processes governing the interactions of Hg compounds with biofilm constituents are understudied. The development of novel conceptual and methodological approaches allowing an understanding of the chemo- and biodynamic aspects is necessary to improve the knowledge on Hg cycling in shallow water as well as to enable improved use of freshwater biofilms as potential indicators of water quality and to support better informed risk assessment. Environ Toxicol Chem 2017;36:3194-3205. © 2017 SETAC.

Biofilm accumulation and structure in the flow path of drip emitters using reclaimed wastewater

Abstract: Biofouling has been identified as a major contributor to emitter clogging in drip irrigation systems that distribute reclaimed wastewater. Two types of drip emitters were evaluated for use with reclaimed wastewater. Microbial biofilm accumulations, including proteins, polysaccharides, and phospholipid fatty acids (PLFAs), were tested to determine the biofilm development and diversity in the emitter flow path. The microbial biofilm structure was analyzed using scanning electron microscopy (SEM). The results showed rapid growth of the biofilm and accumulated sediments that led to eventual reduction of emitter discharge, and the biofilm played an inducing role in the clogging process. Biomass growth in the emitter flow path fluctuated as biomass was scoured off the surface areas. The scoured sediment tended to accumulate and clog the outlets or other emitter parts. Microphotographs revealed microparticles in the biofilm matrix coupling with extracellular polymeric substance (EPS) and showed the biofilm attachment process that would initiate clogging in the emitter flow path. The particle size of the clogging sediment can be very small, and filtration alone was not an effective treatment to control emitter clogging. This study provides some suggestions for control of clogging, and it may provide a framework for future investigations into the role of biofilms in the clogging of drip emitters that distribute reclaimed wastewater.

Employing high-frequency alternating magnetic fields for the non-invasive treatment of prosthetic joint infections.

Abstract: Treatment of prosthetic joint infection (PJI) usually requires surgical replacement of the infected joint and weeks of antibiotic therapy, due to the formation of biofilm. We introduce a non-invasive method for thermal destruction of biofilm on metallic implants using high-frequency (>100 kHz) alternating magnetic fields (AMF). In vitro investigations demonstrate a >5-log reduction in bacterial counts after 5 minutes of AMF exposure. Confocal and scanning electron microscopy confirm removal of biofilm matrix components within 1 minute of AMF exposure, and combination studies of antibiotics and AMF demonstrate a 5-log increase in the sensitivity of Pseudomonas aeruginosa to ciprofloxacin. Finite element analysis (FEA) simulations demonstrate that intermittent AMF exposures can achieve uniform surface heating of a prosthetic knee joint. In vivo studies confirm thermal damage is confined to a localized region (<2 mm) around the implant, and safety can be achieved using acoustic monitoring for the presence of surface boiling. These initial studies support the hypothesis that AMF exposures can eradicate biofilm on metal implants, and may enhance the effectiveness of conventional antibiotics.

Expression of the primary carbohydrate component of the Bordetella bronchiseptica biofilm matrix is dependent on growth phase but independent of Bvg regulation.

Abstract: We previously showed that the Bvg virulence control system regulates biofilm formation in Bordetella bronchiseptica (Y. Irie, S. Mattoo, and M. H. Yuk, J. Bacteriol. 186:5692-5698, 2004). Analyses of the extracellular components of B. bronchiseptica biofilm matrix revealed that the major sugar component in the matrix was xylose, and linkage analysis indicated a majority of it to be in a 4-linked polymeric form. The production of xylose was independent of Bvg regulation but instead was dependent on bacterial growth phase. In addition, N-acetyl-glucosamine in the matrix was found to be important for the initial development of the biofilm. These results suggest that B. bronchiseptica biofilm formation is growth phase dependent in addition to being regulated by the Bvg virulence system.