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Hydrogen bond

About: Hydrogen bond is a research topic. Over the lifetime, 57701 publications have been published within this topic receiving 1306326 citations.


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TL;DR: In this article, the vibrational properties of 1:1 neutral adducts were studied and the effect of the proton potential on the vibration of the adduct was analyzed.
Abstract: The interaction of Bronsted sites of H−β (AH) with bases B with proton affinity (PA) ranging in the 118 (N2) to 204 (NH3) kcal mol-1 interval leads to the formation of 1:1 adducts. The vibrational manifestations of these adducts change considerably as a function of the proton potential. In 1:1 neutral adducts characterized by weak-medium hydrogen bonds, the shift of the ν(AH) mode (Δν) is proportional to the shift caused by the same bases on the Si−OH (weak) Bronsted acid used as a standard. As far as the 1:1 adducts formed with ethers and tetrahydrofuran (THF; PA = 196 kcal mol-1), the situation is more complex owing to high ionicity acquired by the hydrogen bond. When stronger bases are used (pyridine, Py), the true proton transfer is observed. The ν(AH···B) modes of the medium-strong 1:1 adducts are modulated by Fermi resonances with 2δ and 2γ overtones and with internal modes of A and B moieties. A general review of the phenomenon is given. Also the spectra of the ionic 1:1 adducts formed with Py and...

214 citations

Journal ArticleDOI
TL;DR: Urea m-values for protein folding and other protein processes are quantitatively interpreted and predicted using these urea interaction potentials or Kp values, which reveal that urea accumulates moderately at amide O and weakly at aliphatic C, whereas GB is excluded from both.
Abstract: To explain the large, opposite effects of urea and glycine betaine (GB) on stability of folded proteins and protein complexes, we quantify and interpret preferential interactions of urea with 45 model compounds displaying protein functional groups and compare with a previous analysis of GB. This information is needed to use urea as a probe of coupled folding in protein processes and to tune molecular dynamics force fields. Preferential interactions between urea and model compounds relative to their interactions with water are determined by osmometry or solubility and dissected using a unique coarse-grained analysis to obtain interaction potentials quantifying the interaction of urea with each significant type of protein surface (aliphatic, aromatic hydrocarbon (C); polar and charged N and O). Microscopic local-bulk partition coefficients Kp for the accumulation or exclusion of urea in the water of hydration of these surfaces relative to bulk water are obtained. Kp values reveal that urea accumulates moderately at amide O and weakly at aliphatic C, whereas GB is excluded from both. These results provide both thermodynamic and molecular explanations for the opposite effects of urea and glycine betaine on protein stability, as well as deductions about strengths of amide NH—amide O and amide NH—amide N hydrogen bonds relative to hydrogen bonds to water. Interestingly, urea, like GB, is moderately accumulated at aromatic C surface. Urea m-values for protein folding and other protein processes are quantitatively interpreted and predicted using these urea interaction potentials or Kp values.

213 citations

Journal ArticleDOI
TL;DR: In this article, the authors used ATR-FTIR spectroscopy to study cellulose II fabrics with aqueous sodium hydroxide solution under varying condition parameters, and found that maximum molecular reorganisation occurs in the amorphous and quasi-crystalline phases of the cellulose-II polymer.
Abstract: Cellulose is a linear 1,4-β-glucan polymer where the units are able to form highly ordered structures, as a result of extensive interaction through intra- and intermolecular hydrogen bonding of the three hydroxyl groups in each cellulose unit. Alkali has a substantial influence on morphological, molecular and supramolecular properties of cellulose II polymer fibres causing changes in crystallinity. These physical changes were observed herein using ATR-FTIR spectroscopy, following continuous treatment of the cellulose II fabrics with aqueous sodium hydroxide solution under varying condition parameters. Post-treatment, maxima for total crystallinity index and lateral order index, and minima for hydrogen bond intensity, were observed at concentrations of 3.3 and 4.5 mol dm−3 NaOH, when treated at 25 °C and 40 °C, respectively. Under these treatment conditions, it is proposed that maximum molecular reorganisation occurs in the amorphous and quasi-crystalline phases of the cellulose II polymer.

213 citations

Journal ArticleDOI
TL;DR: In this article, the authors examine the literature pertaining to the different interaction mechanisms between cellulose and non-derivatizing solvent systems with emphasis on the inorganic molten salt hydrates.
Abstract: During cellulose dissolution in non-derivatizing solvents, the inter- and intramolecular hydrogen bonds of the polymer are deconstructed. This occurs either by hydrogen bond formation between one or more components of the solvent systems and the hydroxyl groups of the cellulose or by coordination bond formation between the metal ion present in the medium and the hydroxyl group of cellulose molecules. None of the polymer molecules are actually chemically modified during dissolution. In the first part of this review, we examine the literature pertaining to the different interaction mechanisms between cellulose and non-derivatizing solvent systems with emphasis on the inorganic molten salt hydrates. In the second part of this effort, we further review inorganic molten salt hydrates from the point of view of the changes they impart to the physical properties of the cellulose and the various chemical reactions that can be performed in it.

213 citations

Journal ArticleDOI
TL;DR: It was envisaged that these ionic liquids could act as both solvent and ligand for catalyzed reactions, and this application is demonstrated in hydrogenation reactions, which show that retention of the catalyst in the ionic liquid during product extraction is extremely high.
Abstract: A series of imidazolium salts with the nitrile functional group attached to the alkyl side chain, viz. [CnCNmim][X] (where CnCNmim is the 1-alkylnitrile-3-methylimidazolium cation and Cn = (CH2)n, n = 1−4; X = Cl, PF6, and BF4) and [C3CNdmim][X] (where CnCNdmim is the 1-alkylnitrile-2,3-dimethylimidazolium cation and Cn = (CH2)n, n = 3; X = Cl, PF6, and BF4), have been prepared and characterized using spectroscopic methods. The majority of the nitrile-functionalized imidazolium salts can be classed as ionic liquids since they melt below 100 °C. Four of the imidazolium salts have been characterized in the solid state using single-crystal X-ray diffraction analysis to reveal an extensive series of hydrogen bonds between H atoms on the cation and the anion. The relationship between the solid-state structure and the melting point is discussed. Key physical properties (density, viscosity, and solubility in common solvents) of the low melting ionic liquid have been determined and are compared with those of the ...

213 citations


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Performance
Metrics
No. of papers in the topic in previous years
YearPapers
20232,352
20224,647
20211,701
20201,599
20191,598
20181,668