Showing papers on "Image segmentation published in 2019"

Searching for MobileNetV3

Abstract: We present the next generation of MobileNets based on a combination of complementary search techniques as well as a novel architecture design. MobileNetV3 is tuned to mobile phone CPUs through a combination of hardware-aware network architecture search (NAS) complemented by the NetAdapt algorithm and then subsequently improved through novel architecture advances. This paper starts the exploration of how automated search algorithms and network design can work together to harness complementary approaches improving the overall state of the art. Through this process we create two new MobileNet models for release: MobileNetV3-Large and MobileNetV3-Small which are targeted for high and low resource use cases. These models are then adapted and applied to the tasks of object detection and semantic segmentation. For the task of semantic segmentation (or any dense pixel prediction), we propose a new efficient segmentation decoder Lite Reduced Atrous Spatial Pyramid Pooling (LR-ASPP). We achieve new state of the art results for mobile classification, detection and segmentation. MobileNetV3-Large is 3.2% more accurate on ImageNet classification while reducing latency by 20% compared to MobileNetV2. MobileNetV3-Small is 6.6% more accurate compared to a MobileNetV2 model with comparable latency. MobileNetV3-Large detection is over 25% faster at roughly the same accuracy as MobileNetV2 on COCO detection. MobileNetV3-Large LR-ASPP is 34% faster than MobileNetV2 R-ASPP at similar accuracy for Cityscapes segmentation.

CCNet: Criss-Cross Attention for Semantic Segmentation

Abstract: Full-image dependencies provide useful contextual information to benefit visual understanding problems. In this work, we propose a Criss-Cross Network (CCNet) for obtaining such contextual information in a more effective and efficient way. Concretely, for each pixel, a novel criss-cross attention module in CCNet harvests the contextual information of all the pixels on its criss-cross path. By taking a further recurrent operation, each pixel can finally capture the full-image dependencies from all pixels. Overall, CCNet is with the following merits: 1) GPU memory friendly. Compared with the non-local block, the proposed recurrent criss-cross attention module requires 11x less GPU memory usage. 2) High computational efficiency. The recurrent criss-cross attention significantly reduces FLOPs by about 85% of the non-local block in computing full-image dependencies. 3) The state-of-the-art performance. We conduct extensive experiments on popular semantic segmentation benchmarks including Cityscapes, ADE20K, and instance segmentation benchmark COCO. In particular, our CCNet achieves the mIoU score of 81.4 and 45.22 on Cityscapes test set and ADE20K validation set, respectively, which are the new state-of-the-art results. The source code is available at https://github.com/speedinghzl/CCNet.

Fast Online Object Tracking and Segmentation: A Unifying Approach

Abstract: In this paper we illustrate how to perform both visual object tracking and semi-supervised video object segmentation, in real-time, with a single simple approach. Our method, dubbed SiamMask, improves the offline training procedure of popular fully-convolutional Siamese approaches for object tracking by augmenting their loss with a binary segmentation task. Once trained, SiamMask solely relies on a single bounding box initialisation and operates online, producing class-agnostic object segmentation masks and rotated bounding boxes at 55 frames per second. Despite its simplicity, versatility and fast speed, our strategy allows us to establish a new state-of-the-art among real-time trackers on VOT-2018, while at the same time demonstrating competitive performance and the best speed for the semi-supervised video object segmentation task on DAVIS-2016 and DAVIS-2017.

Deeply Supervised Salient Object Detection with Short Connections

Abstract: Recent progress on salient object detection is substantial, benefiting mostly from the explosive development of Convolutional Neural Networks (CNNs). Semantic segmentation and salient object detection algorithms developed lately have been mostly based on Fully Convolutional Neural Networks (FCNs). There is still a large room for improvement over the generic FCN models that do not explicitly deal with the scale-space problem. The Holistically-Nested Edge Detector (HED) provides a skip-layer structure with deep supervision for edge and boundary detection, but the performance gain of HED on saliency detection is not obvious. In this paper, we propose a new salient object detection method by introducing short connections to the skip-layer structures within the HED architecture. Our framework takes full advantage of multi-level and multi-scale features extracted from FCNs, providing more advanced representations at each layer, a property that is critically needed to perform segment detection. Our method produces state-of-the-art results on 5 widely tested salient object detection benchmarks, with advantages in terms of efficiency (0.08 seconds per image), effectiveness, and simplicity over the existing algorithms. Beyond that, we conduct an exhaustive analysis of the role of training data on performance. We provide a training set for future research and fair comparisons.

Panoptic Segmentation

Abstract: We propose and study a task we name panoptic segmentation (PS). Panoptic segmentation unifies the typically distinct tasks of semantic segmentation (assign a class label to each pixel) and instance segmentation (detect and segment each object instance). The proposed task requires generating a coherent scene segmentation that is rich and complete, an important step toward real-world vision systems. While early work in computer vision addressed related image/scene parsing tasks, these are not currently popular, possibly due to lack of appropriate metrics or associated recognition challenges. To address this, we propose a novel panoptic quality (PQ) metric that captures performance for all classes (stuff and things) in an interpretable and unified manner. Using the proposed metric, we perform a rigorous study of both human and machine performance for PS on three existing datasets, revealing interesting insights about the task. The aim of our work is to revive the interest of the community in a more unified view of image segmentation. For more analysis and up-to-date results, please check the arXiv version of the paper: {\small\url{https://arxiv.org/abs/1801.00868}}.

BASNet: Boundary-Aware Salient Object Detection

Abstract: Deep Convolutional Neural Networks have been adopted for salient object detection and achieved the state-of-the-art performance. Most of the previous works however focus on region accuracy but not on the boundary quality. In this paper, we propose a predict-refine architecture, BASNet, and a new hybrid loss for Boundary-Aware Salient object detection. Specifically, the architecture is composed of a densely supervised Encoder-Decoder network and a residual refinement module, which are respectively in charge of saliency prediction and saliency map refinement. The hybrid loss guides the network to learn the transformation between the input image and the ground truth in a three-level hierarchy -- pixel-, patch- and map- level -- by fusing Binary Cross Entropy (BCE), Structural SIMilarity (SSIM) and Intersection-over-Union (IoU) losses. Equipped with the hybrid loss, the proposed predict-refine architecture is able to effectively segment the salient object regions and accurately predict the fine structures with clear boundaries. Experimental results on six public datasets show that our method outperforms the state-of-the-art methods both in terms of regional and boundary evaluation measures. Our method runs at over 25 fps on a single GPU. The code is available at: https://github.com/NathanUA/BASNet.

CE-Net: Context Encoder Network for 2D Medical Image Segmentation

Abstract: Medical image segmentation is an important step in medical image analysis. With the rapid development of a convolutional neural network in image processing, deep learning has been used for medical image segmentation, such as optic disc segmentation, blood vessel detection, lung segmentation, cell segmentation, and so on. Previously, U-net based approaches have been proposed. However, the consecutive pooling and strided convolutional operations led to the loss of some spatial information. In this paper, we propose a context encoder network (CE-Net) to capture more high-level information and preserve spatial information for 2D medical image segmentation. CE-Net mainly contains three major components: a feature encoder module, a context extractor, and a feature decoder module. We use the pretrained ResNet block as the fixed feature extractor. The context extractor module is formed by a newly proposed dense atrous convolution block and a residual multi-kernel pooling block. We applied the proposed CE-Net to different 2D medical image segmentation tasks. Comprehensive results show that the proposed method outperforms the original U-Net method and other state-of-the-art methods for optic disc segmentation, vessel detection, lung segmentation, cell contour segmentation, and retinal optical coherence tomography layer segmentation.

Auto-DeepLab: Hierarchical Neural Architecture Search for Semantic Image Segmentation

Abstract: Recently, Neural Architecture Search (NAS) has successfully identified neural network architectures that exceed human designed ones on large-scale image classification. In this paper, we study NAS for semantic image segmentation. Existing works often focus on searching the repeatable cell structure, while hand-designing the outer network structure that controls the spatial resolution changes. This choice simplifies the search space, but becomes increasingly problematic for dense image prediction which exhibits a lot more network level architectural variations. Therefore, we propose to search the network level structure in addition to the cell level structure, which forms a hierarchical architecture search space. We present a network level search space that includes many popular designs, and develop a formulation that allows efficient gradient-based architecture search (3 P100 GPU days on Cityscapes images). We demonstrate the effectiveness of the proposed method on the challenging Cityscapes, PASCAL VOC 2012, and ADE20K datasets. Auto-DeepLab, our architecture searched specifically for semantic image segmentation, attains state-of-the-art performance without any ImageNet pretraining.

Deep Learning Techniques for Medical Image Segmentation: Achievements and Challenges

Abstract: Deep learning-based image segmentation is by now firmly established as a robust tool in image segmentation. It has been widely used to separate homogeneous areas as the first and critical component of diagnosis and treatment pipeline. In this article, we present a critical appraisal of popular methods that have employed deep-learning techniques for medical image segmentation. Moreover, we summarize the most common challenges incurred and suggest possible solutions.

CE-Net: Context Encoder Network for 2D Medical Image Segmentation

Abstract: Medical image segmentation is an important step in medical image analysis. With the rapid development of convolutional neural network in image processing, deep learning has been used for medical image segmentation, such as optic disc segmentation, blood vessel detection, lung segmentation, cell segmentation, etc. Previously, U-net based approaches have been proposed. However, the consecutive pooling and strided convolutional operations lead to the loss of some spatial information. In this paper, we propose a context encoder network (referred to as CE-Net) to capture more high-level information and preserve spatial information for 2D medical image segmentation. CE-Net mainly contains three major components: a feature encoder module, a context extractor and a feature decoder module. We use pretrained ResNet block as the fixed feature extractor. The context extractor module is formed by a newly proposed dense atrous convolution (DAC) block and residual multi-kernel pooling (RMP) block. We applied the proposed CE-Net to different 2D medical image segmentation tasks. Comprehensive results show that the proposed method outperforms the original U-Net method and other state-of-the-art methods for optic disc segmentation, vessel detection, lung segmentation, cell contour segmentation and retinal optical coherence tomography layer segmentation.

Fully Convolutional Networks for Multisource Building Extraction From an Open Aerial and Satellite Imagery Data Set

Abstract: The application of the convolutional neural network has shown to greatly improve the accuracy of building extraction from remote sensing imagery. In this paper, we created and made open a high-quality multisource data set for building detection, evaluated the accuracy obtained in most recent studies on the data set, demonstrated the use of our data set, and proposed a Siamese fully convolutional network model that obtained better segmentation accuracy. The building data set that we created contains not only aerial images but also satellite images covering 1000 km2 with both raster labels and vector maps. The accuracy of applying the same methodology to our aerial data set outperformed several other open building data sets. On the aerial data set, we gave a thorough evaluation and comparison of most recent deep learning-based methods, and proposed a Siamese U-Net with shared weights in two branches, and original images and their down-sampled counterparts as inputs, which significantly improves the segmentation accuracy, especially for large buildings. For multisource building extraction, the generalization ability is further evaluated and extended by applying a radiometric augmentation strategy to transfer pretrained models on the aerial data set to the satellite data set. The designed experiments indicate our data set is accurate and can serve multiple purposes including building instance segmentation and change detection; our result shows the Siamese U-Net outperforms current building extraction methods and could provide valuable reference.

Deep learning for cellular image analysis

Abstract: Recent advances in computer vision and machine learning underpin a collection of algorithms with an impressive ability to decipher the content of images. These deep learning algorithms are being applied to biological images and are transforming the analysis and interpretation of imaging data. These advances are positioned to render difficult analyses routine and to enable researchers to carry out new, previously impossible experiments. Here we review the intersection between deep learning and cellular image analysis and provide an overview of both the mathematical mechanics and the programming frameworks of deep learning that are pertinent to life scientists. We survey the field's progress in four key applications: image classification, image segmentation, object tracking, and augmented microscopy. Last, we relay our labs' experience with three key aspects of implementing deep learning in the laboratory: annotating training data, selecting and training a range of neural network architectures, and deploying solutions. We also highlight existing datasets and implementations for each surveyed application.

Invariant Information Clustering for Unsupervised Image Classification and Segmentation

Abstract: We present a novel clustering objective that learns a neural network classifier from scratch, given only unlabelled data samples. The model discovers clusters that accurately match semantic classes, achieving state-of-the-art results in eight unsupervised clustering benchmarks spanning image classification and segmentation. These include STL10, an unsupervised variant of ImageNet, and CIFAR10, where we significantly beat the accuracy of our closest competitors by 6.6 and 9.5 absolute percentage points respectively. The method is not specialised to computer vision and operates on any paired dataset samples; in our experiments we use random transforms to obtain a pair from each image. The trained network directly outputs semantic labels, rather than high dimensional representations that need external processing to be usable for semantic clustering. The objective is simply to maximise mutual information between the class assignments of each pair. It is easy to implement and rigorously grounded in information theory, meaning we effortlessly avoid degenerate solutions that other clustering methods are susceptible to. In addition to the fully unsupervised mode, we also test two semi-supervised settings. The first achieves 88.8% accuracy on STL10 classification, setting a new global state-of-the-art over all existing methods (whether supervised, semi-supervised or unsupervised). The second shows robustness to 90% reductions in label coverage, of relevance to applications that wish to make use of small amounts of labels. github.com/xu-ji/IIC

4D Spatio-Temporal ConvNets: Minkowski Convolutional Neural Networks

Abstract: In many robotics and VR/AR applications, 3D-videos are readily-available input sources (a sequence of depth images, or LIDAR scans). However, in many cases, the 3D-videos are processed frame-by-frame either through 2D convnets or 3D perception algorithms. In this work, we propose 4-dimensional convolutional neural networks for spatio-temporal perception that can directly process such 3D-videos using high-dimensional convolutions. For this, we adopt sparse tensors and propose generalized sparse convolutions that encompass all discrete convolutions. To implement the generalized sparse convolution, we create an open-source auto-differentiation library for sparse tensors that provides extensive functions for high-dimensional convolutional neural networks. We create 4D spatio-temporal convolutional neural networks using the library and validate them on various 3D semantic segmentation benchmarks and proposed 4D datasets for 3D-video perception. To overcome challenges in 4D space, we propose the hybrid kernel, a special case of the generalized sparse convolution, and trilateral-stationary conditional random fields that enforce spatio-temporal consistency in the 7D space-time-chroma space. Experimentally, we show that a convolutional neural network with only generalized 3D sparse convolutions can outperform 2D or 2D-3D hybrid methods by a large margin. Also, we show that on 3D-videos, 4D spatio-temporal convolutional neural networks are robust to noise and outperform the 3D convolutional neural network.

PANet: Few-Shot Image Semantic Segmentation With Prototype Alignment

Abstract: Despite the great progress made by deep CNNs in image semantic segmentation, they typically require a large number of densely-annotated images for training and are difficult to generalize to unseen object categories. Few-shot segmentation has thus been developed to learn to perform segmentation from only a few annotated examples. In this paper, we tackle the challenging few-shot segmentation problem from a metric learning perspective and present PANet, a novel prototype alignment network to better utilize the information of the support set. Our PANet learns class-specific prototype representations from a few support images within an embedding space and then performs segmentation over the query images through matching each pixel to the learned prototypes. With non-parametric metric learning, PANet offers high-quality prototypes that are representative for each semantic class and meanwhile discriminative for different classes. Moreover, PANet introduces a prototype alignment regularization between support and query. With this, PANet fully exploits knowledge from the support and provides better generalization on few-shot segmentation. Significantly, our model achieves the mIoU score of 48.1% and 55.7% on PASCAL-5i for 1-shot and 5-shot settings respectively, surpassing the state-of-the-art method by 1.8% and 8.6%.

Panoptic Feature Pyramid Networks

Abstract: The recently introduced panoptic segmentation task has renewed our community's interest in unifying the tasks of instance segmentation (for thing classes) and semantic segmentation (for stuff classes). However, current state-of-the-art methods for this joint task use separate and dissimilar networks for instance and semantic segmentation, without performing any shared computation. In this work, we aim to unify these methods at the architectural level, designing a single network for both tasks. Our approach is to endow Mask R-CNN, a popular instance segmentation method, with a semantic segmentation branch using a shared Feature Pyramid Network (FPN) backbone. Surprisingly, this simple baseline not only remains effective for instance segmentation, but also yields a lightweight, top-performing method for semantic segmentation. In this work, we perform a detailed study of this minimally extended version of Mask R-CNN with FPN, which we refer to as Panoptic FPN, and show it is a robust and accurate baseline for both tasks. Given its effectiveness and conceptual simplicity, we hope our method can serve as a strong baseline and aid future research in panoptic segmentation.

A Novel Focal Tversky Loss Function With Improved Attention U-Net for Lesion Segmentation

Abstract: We propose a generalized focal loss function based on the Tversky index to address the issue of data imbalance in medical image segmentation. Compared to the commonly used Dice loss, our loss function achieves a better trade off between precision and recall when training on small structures such as lesions. To evaluate our loss function, we improve the attention U-Net model by incorporating an image pyramid to preserve contextual features. We experiment on the BUS 2017 dataset and ISIC 2018 dataset where lesions occupy 4.84% and 21.4% of the images area and improve segmentation accuracy when compared to the standard U-Net by 25.7% and 3.6%, respectively.

Shape Robust Text Detection With Progressive Scale Expansion Network

Abstract: Scene text detection has witnessed rapid progress especially with the recent development of convolutional neural networks. However, there still exists two challenges which prevent the algorithm into industry applications. On the one hand, most of the state-of-art algorithms require quadrangle bounding box which is in-accurate to locate the texts with arbitrary shape. On the other hand, two text instances which are close to each other may lead to a false detection which covers both instances. Traditionally, the segmentation-based approach can relieve the first problem but usually fail to solve the second challenge. To address these two challenges, in this paper, we propose a novel Progressive Scale Expansion Network (PSENet), which can precisely detect text instances with arbitrary shapes. More specifically, PSENet generates the different scale of kernels for each text instance, and gradually expands the minimal scale kernel to the text instance with the complete shape. Due to the fact that there are large geometrical margins among the minimal scale kernels, our method is effective to split the close text instances, making it easier to use segmentation-based methods to detect arbitrary-shaped text instances. Extensive experiments on CTW1500, Total-Text, ICDAR 2015 and ICDAR 2017 MLT validate the effectiveness of PSENet. Notably, on CTW1500, a dataset full of long curve texts, PSENet achieves a F-measure of 74.3% at 27 FPS, and our best F-measure (82.2%) outperforms state-of-art algorithms by 6.6%. The code will be released in the future.

VoxelMorph: A Learning Framework for Deformable Medical Image Registration

Abstract: We present VoxelMorph, a fast learning-based framework for deformable, pairwise medical image registration. Traditional registration methods optimize an objective function for each pair of images, which can be time-consuming for large datasets or rich deformation models. In contrast to this approach and building on recent learning-based methods, we formulate registration as a function that maps an input image pair to a deformation field that aligns these images. We parameterize the function via a convolutional neural network and optimize the parameters of the neural network on a set of images. Given a new pair of scans, VoxelMorph rapidly computes a deformation field by directly evaluating the function. In this paper, we explore two different training strategies. In the first (unsupervised) setting, we train the model to maximize standard image matching objective functions that are based on the image intensities. In the second setting, we leverage auxiliary segmentations available in the training data. We demonstrate that the unsupervised model’s accuracy is comparable to the state-of-the-art methods while operating orders of magnitude faster. We also show that VoxelMorph trained with auxiliary data improves registration accuracy at test time and evaluate the effect of training set size on registration. Our method promises to speed up medical image analysis and processing pipelines while facilitating novel directions in learning-based registration and its applications. Our code is freely available at https://github.com/voxelmorph/voxelmorph .

Recurrent residual U-Net for medical image segmentation

Abstract: Deep learning (DL)-based semantic segmentation methods have been providing state-of-the-art performance in the past few years. More specifically, these techniques have been successfully applied in medical image classification, segmentation, and detection tasks. One DL technique, U-Net, has become one of the most popular for these applications. We propose a recurrent U-Net model and a recurrent residual U-Net model, which are named RU-Net and R2U-Net, respectively. The proposed models utilize the power of U-Net, residual networks, and recurrent convolutional neural networks. There are several advantages to using these proposed architectures for segmentation tasks. First, a residual unit helps when training deep architectures. Second, feature accumulation with recurrent residual convolutional layers ensures better feature representation for segmentation tasks. Third, it allows us to design better U-Net architectures with the same number of network parameters with better performance for medical image segmentation. The proposed models are tested on three benchmark datasets, such as blood vessel segmentation in retinal images, skin cancer segmentation, and lung lesion segmentation. The experimental results show superior performance on segmentation tasks compared to equivalent models, including a variant of a fully connected convolutional neural network called SegNet, U-Net, and residual U-Net.

Uncertainty-Aware Self-ensembling Model for Semi-supervised 3D Left Atrium Segmentation

Abstract: Training deep convolutional neural networks usually requires a large amount of labeled data. However, it is expensive and time-consuming to annotate data for medical image segmentation tasks. In this paper, we present a novel uncertainty-aware semi-supervised framework for left atrium segmentation from 3D MR images. Our framework can effectively leverage the unlabeled data by encouraging consistent predictions of the same input under different perturbations. Concretely, the framework consists of a student model and a teacher model, and the student model learns from the teacher model by minimizing a segmentation loss and a consistency loss with respect to the targets of the teacher model. We design a novel uncertainty-aware scheme to enable the student model to gradually learn from the meaningful and reliable targets by exploiting the uncertainty information. Experiments show that our method achieves high performance gains by incorporating the unlabeled data. Our method outperforms the state-of-the-art semi-supervised methods, demonstrating the potential of our framework for the challenging semi-supervised problems.

HyperDense-Net: A Hyper-Densely Connected CNN for Multi-Modal Image Segmentation

Abstract: Recently, dense connections have attracted substantial attention in computer vision because they facilitate gradient flow and implicit deep supervision during training. Particularly, DenseNet that connects each layer to every other layer in a feed-forward fashion and has shown impressive performances in natural image classification tasks. We propose HyperDenseNet , a 3-D fully convolutional neural network that extends the definition of dense connectivity to multi-modal segmentation problems. Each imaging modality has a path, and dense connections occur not only between the pairs of layers within the same path but also between those across different paths. This contrasts with the existing multi-modal CNN approaches, in which modeling several modalities relies entirely on a single joint layer (or level of abstraction) for fusion, typically either at the input or at the output of the network. Therefore, the proposed network has total freedom to learn more complex combinations between the modalities, within and in-between all the levels of abstraction , which increases significantly the learning representation. We report extensive evaluations over two different and highly competitive multi-modal brain tissue segmentation challenges, iSEG 2017 and MRBrainS 2013, with the former focusing on six month infant data and the latter on adult images. HyperDenseNet yielded significant improvements over many state-of-the-art segmentation networks, ranking at the top on both benchmarks. We further provide a comprehensive experimental analysis of features re-use, which confirms the importance of hyper-dense connections in multi-modal representation learning. Our code is publicly available.

Gated-SCNN: Gated Shape CNNs for Semantic Segmentation

Abstract: Current state-of-the-art methods for image segmentation form a dense image representation where the color, shape and texture information are all processed together inside a deep CNN. This however may not be ideal as they contain very different type of information relevant for recognition. Here, we propose a new two-stream CNN architecture for semantic segmentation that explicitly wires shape information as a separate processing branch, i.e. shape stream, that processes information in parallel to the classical stream. Key to this architecture is a new type of gates that connect the intermediate layers of the two streams. Specifically, we use the higher-level activations in the classical stream to gate the lower-level activations in the shape stream, effectively removing noise and helping the shape stream to only focus on processing the relevant boundary-related information. This enables us to use a very shallow architecture for the shape stream that operates on the image-level resolution. Our experiments show that this leads to a highly effective architecture that produces sharper predictions around object boundaries and significantly boosts performance on thinner and smaller objects. Our method achieves state-of-the-art performance on the Cityscapes benchmark, in terms of both mask (mIoU) and boundary (F-score) quality, improving by 2% and 4% over strong baselines.

DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation

Abstract: Accurate medical image segmentation is essential for diagnosis, surgical planning and many other applications. Convolutional Neural Networks (CNNs) have become the state-of-the-art automatic segmentation methods. However, fully automatic results may still need to be refined to become accurate and robust enough for clinical use. We propose a deep learning-based interactive segmentation method to improve the results obtained by an automatic CNN and to reduce user interactions during refinement for higher accuracy. We use one CNN to obtain an initial automatic segmentation, on which user interactions are added to indicate mis-segmentations. Another CNN takes as input the user interactions with the initial segmentation and gives a refined result. We propose to combine user interactions with CNNs through geodesic distance transforms, and propose a resolution-preserving network that gives a better dense prediction. In addition, we integrate user interactions as hard constraints into a back-propagatable Conditional Random Field. We validated the proposed framework in the context of 2D placenta segmentation from fetal MRI and 3D brain tumor segmentation from FLAIR images. Experimental results show our method achieves a large improvement from automatic CNNs, and obtains comparable and even higher accuracy with fewer user interventions and less time compared with traditional interactive methods.

Video Object Segmentation without Temporal Information

Abstract: Video Object Segmentation, and video processing in general, has been historically dominated by methods that rely on the temporal consistency and redundancy in consecutive video frames. When the temporal smoothness is suddenly broken, such as when an object is occluded, or some frames are missing in a sequence, the result of these methods can deteriorate significantly. This paper explores the orthogonal approach of processing each frame independently, i.e., disregarding the temporal information. In particular, it tackles the task of semi-supervised video object segmentation: the separation of an object from the background in a video, given its mask in the first frame. We present Semantic One-Shot Video Object Segmentation (OSVOS$^\mathrm {S}$S), based on a fully-convolutional neural network architecture that is able to successively transfer generic semantic information, learned on ImageNet, to the task of foreground segmentation, and finally to learning the appearance of a single annotated object of the test sequence (hence one shot). We show that instance-level semantic information, when combined effectively, can dramatically improve the results of our previous method, OSVOS. We perform experiments on two recent single-object video segmentation databases, which show that OSVOS$^\mathrm {S}$S is both the fastest and most accurate method in the state of the art. Experiments on multi-object video segmentation show that OSVOS$^\mathrm {S}$S obtains competitive results.

Segmentation of Nuclei in Histopathology Images by Deep Regression of the Distance Map

Abstract: The advent of digital pathology provides us with the challenging opportunity to automatically analyze whole slides of diseased tissue in order to derive quantitative profiles that can be used for diagnosis and prognosis tasks. In particular, for the development of interpretable models, the detection and segmentation of cell nuclei is of the utmost importance. In this paper, we describe a new method to automatically segment nuclei from Haematoxylin and Eosin (H&E) stained histopathology data with fully convolutional networks. In particular, we address the problem of segmenting touching nuclei by formulating the segmentation problem as a regression task of the distance map. We demonstrate superior performance of this approach as compared to other approaches using Convolutional Neural Networks.

Brain Tumor Segmentation Using Convolutional Neural Networks in MRI Images.

Abstract: In medical image processing, Brain tumor segmentation plays an important role. Early detection of these tumors is highly required to give Treatment of patients. The patient’s life chances are improved by the early detection of it. The process of diagnosing the brain tumoursby the physicians is normally carried out using a manual way of segmentation. It is time consuming and a difficult one. To solve these problems, Enhanced Convolutional Neural Networks (ECNN) is proposed with loss function optimization by BAT algorithm for automatic segmentation method. The primary aim is to present optimization based MRIs image segmentation. Small kernels allow the design in a deep architecture. It has a positive consequence with respect to overfitting provided the lesser weights are assigned to the network. Skull stripping and image enhancement algorithms are used for pre-processing. The experimental result shows the better performance while comparing with the existing methods. The compared parameters are precision, recall and accuracy. In future, different selecting schemes can be adopted to improve the accuracy.

Multi-task Learning for Detecting and Segmenting Manipulated Facial Images and Videos

Abstract: Detecting manipulated images and videos is an important topic in digital media forensics. Most detection methods use binary classification to determine the probability of a query being manipulated. Another important topic is locating manipulated regions (i.e., performing segmentation), which are mostly created by three commonly used attacks: removal, copy-move, and splicing. We have designed a convolutional neural network that uses the multi-task learning approach to simultaneously detect manipulated images and videos and locate the manipulated regions for each query. Information gained by performing one task is shared with the other task and thereby enhance the performance of both tasks. A semi-supervised learning approach is used to improve the network’s generability. The network includes an encoder and a Y-shaped decoder. Activation of the encoded features is used for the binary classification. The output of one branch of the decoder is used for segmenting the manipulated regions while that of the other branch is used for reconstructing the input, which helps improve overall performance. Experiments using the FaceForensics and Face-Forensics++ databases demonstrated the networks effectiveness against facial reenactment attacks and face swapping attacks as well as its ability to deal with the mismatch condition for previously seen attacks. Moreover, fine-tuning using just a small amount of data enables the network to deal with unseen attacks.

Segmentation for Object-Based Image Analysis (OBIA): A review of algorithms and challenges from remote sensing perspective

Abstract: Image segmentation is a critical and important step in (GEographic) Object-Based Image Analysis (GEOBIA or OBIA). The final feature extraction and classification in OBIA is highly dependent on the quality of image segmentation. Segmentation has been used in remote sensing image processing since the advent of the Landsat-1 satellite. However, after the launch of the high-resolution IKONOS satellite in 1999, the paradigm of image analysis moved from pixel-based to object-based. As a result, the purpose of segmentation has been changed from helping pixel labeling to object identification. Although several articles have reviewed segmentation algorithms, it is unclear if some segmentation algorithms are generally more suited for (GE)OBIA than others. This article has conducted an extensive state-of-the-art survey on OBIA techniques, discussed different segmentation techniques and their applicability to OBIA. Conceptual details of those techniques are explained along with the strengths and weaknesses. The available tools and software packages for segmentation are also summarized. The key challenge in image segmentation is to select optimal parameters and algorithms that can general image objects matching with the meaningful geographic objects. Recent research indicates an apparent movement towards the improvement of segmentation algorithms, aiming at more accurate, automated, and computationally efficient techniques.

Recalibrating Fully Convolutional Networks With Spatial and Channel “Squeeze and Excitation” Blocks

Abstract: In a wide range of semantic segmentation tasks, fully convolutional neural networks (F-CNNs) have been successfully leveraged to achieve the state-of-the-art performance. Architectural innovations of F-CNNs have mainly been on improving spatial encoding or network connectivity to aid gradient flow. In this paper, we aim toward an alternate direction of recalibrating the learned feature maps adaptively, boosting meaningful features while suppressing weak ones. The recalibration is achieved by simple computational blocks that can be easily integrated in F-CNNs architectures. We draw our inspiration from the recently proposed “squeeze and excitation” (SE) modules for channel recalibration for image classification. Toward this end, we introduce three variants of SE modules for segmentation: 1) squeezing spatially and exciting channel wise; 2) squeezing channel wise and exciting spatially; and 3) joint spatial and channel SE. We effectively incorporate the proposed SE blocks in three state-of-the-art F-CNNs and demonstrate a consistent improvement of segmentation accuracy on three challenging benchmark datasets. Importantly, SE blocks only lead to a minimal increase in model complexity of about 1.5%, while the Dice score increases by 4%–9% in the case of U-Net. Hence, we believe that SE blocks can be an integral part of future F-CNN architectures.