scispace - formally typeset
Search or ask a question
Topic

Java applet

About: Java applet is a research topic. Over the lifetime, 4924 publications have been published within this topic receiving 108216 citations.


Papers
More filters
Journal ArticleDOI
TL;DR: Jalview 2 is a system for interactive WYSIWYG editing, analysis and annotation of multiple sequence alignments that employs web services for sequence alignment, secondary structure prediction and the retrieval of alignments, sequences, annotation and structures from public databases and any DAS 1.53 compliant sequence or annotation server.
Abstract: Summary: Jalview Version 2 is a system for interactive WYSIWYG editing, analysis and annotation of multiple sequence alignments. Core features include keyboard and mouse-based editing, multiple views and alignment overviews, and linked structure display with Jmol. Jalview 2 is available in two forms: a lightweight Java applet for use in web applications, and a powerful desktop application that employs web services for sequence alignment, secondary structure prediction and the retrieval of alignments, sequences, annotation and structures from public databases and any DAS 1.53 compliant sequence or annotation server. Availability: The Jalview 2 Desktop application and JalviewLite applet are made freely available under the GPL, and can be downloaded from www.jalview.org Contact: g.j.barton@dundee.ac.uk

7,926 citations

Journal ArticleDOI
TL;DR: Java Treeview as mentioned in this paper is an open-source, cross-platform rewrite that handles very large datasets well, and supports extensions to the file format that allow the results of additional analysis to be visualized and compared.
Abstract: Summary: Open source software encourages innovation by allowing users to extend the functionality of existing applications. Treeview is a popular application for the visualization of microarray data, but is closed-source and platform-specific, which limits both its current utility and suitability as a platform for further development. Java Treeview is an open-source, cross-platform rewrite that handles very large datasets well, and supports extensions to the file format that allow the results of additional analysis to be visualized and compared. The combination of a general file format and open source makes Java Treeview an attractive choice for solving a class of visualization problems. An applet version is also available that can be used on any website with no special server-side setup. Availability:http://jtreeview.sourceforge.net under GPL.

2,998 citations

Book
05 Nov 2002
TL;DR: This book discusses the evolution of Layers in Enterprise Applications, Concurrency Problems, and Object-Relational Behavioral Patterns, as well as some Technology-Specific Advice.
Abstract: Preface. Who This Book Is For. Acknowledgements. Colophon. Introduction. Architecture. Enterprise Applications. Kinds of Enterprise Application. Thinking About Performance. Patterns. The Structure of the Patterns. Limitations of These Patterns. I. THE NARRATIVES. 1. Layering. The Evolution of Layers in Enterprise Applications. The Three Principal Layers. Choosing Where to Run Your Layers. 2. Organizing Domain Logic. Making a Choice. Service Layer. 3. Mapping to Relational Databases. Architectural Patterns. The Behavioral Problem. Reading in Data Structural Mapping Patterns. Mapping Relationships. Inheritance. Building the Mapping. Double Mapping. Using Metadata. Database Connections. Some Miscellaneous Points. Further Reading. 4. Web Presentation. View Patterns. Input Controller Patterns. Further Reading. 5. Concurrency (by Martin Fowler and David Rice). Concurrency Problems. Execution Contexts. Isolation and Immutability. Optimistic and Pessimistic Concurrency Control. Preventing Inconsistent Reads. Deadlocks. Transactions. ACID. Transactional Resources. Reducing Transaction Isolation for Liveness. Business and System Transactions. Patterns for Offline Concurrency Control. Application Server Concurrency. Further Reading. 6. Session State. The Value of Statelessness. Session State. Ways to Store Session State. 7. Distribution Strategies. The Allure of Distributed Objects. Remote and Local Interfaces. Where You Have to Distribute. Working with the Distribution Boundary. Interfaces for Distribution. 8. Putting it all Together. Starting With the Domain Layer. Down to the Data Source. Data Source for Transaction Script. Data Source Table Module (125). Data Source for Domain Model (116). The Presentation Layer. Some Technology-Specific Advice. Java and J2EE. .NET. Stored Procedures. Web Services. Other Layering Schemes. II. THE PATTERNS. 9. Domain Logic Patterns. Transaction Script. How It Works. When to Use It. The Revenue Recognition Problem. Example: Revenue Recognition (Java). Domain Model. How It Works. When to Use It. Further Reading. Example: Revenue Recognition (Java). Table Module. How It Works. When to Use It. Example: Revenue Recognition with a Table Module (C#). Service Layer(by Randy Stafford). How It Works. When to Use It. Further Reading. Example: Revenue Recognition (Java). 10. Data Source Architectural Patterns. Table Data Gateway. How It Works. When to Use It. Further Reading. Example: Person Gateway (C#). Example: Using ADO.NET Data Sets (C#). Row Data Gateway. How It Works. When to Use It. Example: A Person Record (Java). Example: A Data Holder for a Domain Object (Java). Active Record. How It Works. When to Use It. Example: A Simple Person (Java). Data Mapper. How It Works. When to Use It. Example: A Simple Database Mapper (Java). Example: Separating the Finders (Java). Example: Creating an Empty Object (Java). 11. Object-Relational Behavioral Patterns. Unit of Work. How It Works. When to Use It. Example: Unit of Work with Object Registration (Java) (by David Rice). Identity Map. How It Works. When to Use It. Example: Methods for an Identity Map (Java). Lazy Load. How It Works. When to Use It. Example: Lazy Initialization (Java). Example: Virtual Proxy (Java). Example: Using a Value Holder (Java). Example: Using Ghosts (C#). 12. Object-Relational Structural Patterns. Identity Field. How It Works. When to Use It. Further Reading. Example: Integral Key (C#). Example: Using a Key Table (Java). Example: Using a Compound Key (Java). Foreign Key Mapping. How It Works. When to Use It. Example: Single-Valued Reference (Java). Example: Multitable Find (Java). Example: Collection of References (C#). Association Table Mapping. How It Works. When to Use It. Example: Employees and Skills (C#). Example: Using Direct SQL (Java). Example: Using a Single Query for Multiple Employees (Java) (by Matt Foemmel and Martin Fowler). Dependent Mapping. How It Works. When to Use It. Example: Albums and Tracks (Java). Embedded Value. How It Works. When to Use It. Further Reading. Example: Simple Value Object (Java). Serialized LOB. How It Works. When to Use It. Example: Serializing a Department Hierarchy in XML (Java). Single Table Inheritance. How It Works. When to Use It. Example: A Single Table for Players (C#). Loading an Object from the Database. Class Table Inheritance. How It Works. When to Use It. Further Reading. Example: Players and Their Kin (C#). Concrete Table Inheritance. How It Works. When to Use It. Example: Concrete Players (C#). Inheritance Mappers. How It Works. When to Use It. 13. Object-Relational Metadata Mapping Patterns. Metadata Mapping. How It Works. When to Use It. Example: Using Metadata and Reflection (Java). Query Object. How It Works. When to Use It. Further Reading. Example: A Simple Query Object (Java). Repository (by Edward Hieatt and Rob Mee). How It Works. When to Use It. Further Reading. Example: Finding a Person's Dependents (Java). Example: Swapping Repository Strategies (Java). 14. Web Presentation Patterns. Model View Controller. How It Works. When to Use It. Page Controller. How It Works. When to Use It. Example: Simple Display with a Servlet Controller and a JSP View (Java). Example: Using a JSP as a Handler (Java). Example: Page Handler with a Code Behind (C#). Front Controller. How It Works. When to Use It. Further Reading. Example: Simple Display (Java). Template View. How It Works. When to Use It. Example: Using a JSP as a View with a Separate Controller (Java). Example: ASP.NET Server Page (C#). Transform View. How It Works. When to Use It. Example: Simple Transform (Java). Two Step View. How It Works. When to Use It. Example: Two Stage XSLT (XSLT). Example: JSP and Custom Tags (Java). Application Controller. How It Works. When to Use It. Further Reading. Example: State Model Application Controller (Java). 15. Distribution Patterns. Remote Facade. How It Works. When to Use It. Example: Using a Java Session Bean as a Remote Facade (Java). Example: Web Service (C#). Data Transfer Object. How It Works. When to Use It. Further Reading. Example: Transferring Information about Albums (Java). Example: Serializing Using XML (Java). 16. Offline Concurrency Patterns. Optimistic Offline Lock (by David Rice). How It Works. When to Use It. Example: Domain Layer with Data Mappers (165) (Java). Pessimistic Offline Lock (by David Rice). How It Works. When to Use It. Example: Simple Lock Manager (Java). Coarse-Grained Lock (by David Rice and Matt Foemmel). How It Works. When to Use It. Example: Shared Optimistic Offline Lock (416) (Java). Example: Shared Pessimistic Offline Lock (426) (Java). Example: Root Optimistic Offline Lock (416) (Java). Implicit Lock (by David Rice). How It Works. When to Use It. Example: Implicit Pessimistic Offline Lock (426) (Java). 17. Session State Patterns. Client Session State. How It Works. When to Use It. Server Session State. How It Works. When to Use It. Database Session State. How It Works. When to Use It. 18. Base Patterns. Gateway. How It Works. When to Use It. Example: A Gateway to a Proprietary Messaging Service (Java). Mapper. How It Works. When to Use It. Layer Supertype. How It Works. When to Use It. Example: Domain Object (Java). Separated Interface. How It Works. When to Use It. Registry. How It Works. When to Use It. Example: A Singleton Registry (Java). Example: Thread-Safe Registry (Java) (by Matt Foemmel and Martin Fowler). Value Object. How It Works. When to Use It. Money. How It Works. When to Use It. Example: A Money Class (Java) (by Matt Foemmel and Martin Fowler). Special Case. How It Works. When to Use It. Further Reading. Example: A Simple Null Object (C#). Plugin (by David Rice and Matt Foemmel). How It Works. When to Use It. Example: An Id Generator (Java). Service Stub (by David Rice). How It Works. When to Use It. Example: Sales Tax Service (Java). Record Set. How It Works. When to Use It. References Index. 0321127420T10162002

1,922 citations

Book
01 Jan 1996
TL;DR: The Java (TM)Programming Language, Second Edition, is the definitive resource for all serious Java programmers and lets you in on the rationale behind Java's design, direct from the language's creator, as well as the tradeoffs involved in using specific features.
Abstract: From the Publisher: Co-authored by the creator of the Java technology and an experienced object-oriented developer, The Java (TM)Programming Language, Second Edition, is the definitive resource for all serious Java programmers. This book will give you a solid foundation in Java programming language strategies and techniques. It features a concise introduction to the language; detailed descriptions of Java's commands, constructs, and libraries; and numerous real-world examples that show you how to exploit the language's power, portability, and flexibility. You will find in-depth and progressively advanced coverage of classes and objects, interfaces, exception-handling, threads and multitasking, and packages. In addition, the book describes the Java core library packages, including I/O, standard utilities, language types, and system classes. Thoroughly revised from start to finish, this second edition fully integrate, is the definitive resource for all serious Java programmers. This book will give you a solid foundation in Java programming language strategies and techniques. It features a concise introduction to the language; detailed descriptions of Java's commands, constructs, and libraries; and numerous real-world examples that show you how to exploit the language's power, portability, and flexibility. You will find in-depth and progressively advanced coverage of classes and objects, interfaces, exception-handling, threads and multitasking, and packages. In addition, the book describes the Java core library packages, including I/O, standard utilities, language types, and system classes. Thoroughly revised from start to finish, this second edition fully integrates Java 1.1 into both text and examples. This edition includes the changes introduced in Java 1.1, such as nested classes (including anonymous classes), threading issues, character-based streams, object-serialization, documentation comments, new utility classes, plus internationalization and localization. The book lets you in on the rationale behind Java's design, direct from the language's creator, as well as the tradeoffs involved in using specific features. With these insights, you will have the understanding you need to begin developing Java applications and applets.

1,880 citations

Patent
17 Nov 2000
TL;DR: In this article, the authors present a method to record and archive collaborative Web browsing sessions over a network. But the method is limited to the case where the second computer is instructed to log into a control site that downloads an active control, such as an applet, to the first computer, and the session is then replayed by the control site on the user's computer.
Abstract: A collaborative Web browsing session may take place over a network, allowing the presenter on a first computer to direct the audio and visual components of a browser on one or more second computers. The second computer is instructed to log into a control site that downloads an active control, such as an applet, to the second computer. The present invention allows a collaborative Web browsing session ('session'), as created by the presenter and witnessed by one or more users on second computers, to be recorded and archived by the control site. When a user of a computer is connected to the control site through a communication network such as the World Wide Web, that user may log into the control site and request to view an archived session. The session will then be replayed by the control site on the user's computer, directing the audio and visual components of the browser on the user's computer as if the user was attending the live session. The recorded session replays the events of the live session in real time such that the playback experience contains the same audio and visual events that took place when the session was originally being recorded.

1,363 citations


Network Information
Related Topics (5)
Software
130.5K papers, 2M citations
86% related
Software system
50.7K papers, 935K citations
84% related
Software construction
36.2K papers, 743.8K citations
83% related
Web service
57.6K papers, 989K citations
82% related
Software development
73.8K papers, 1.4M citations
82% related
Performance
Metrics
No. of papers in the topic in previous years
YearPapers
202312
202241
202111
202083
2019135
201852