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Showing papers on "Microbial biodegradation published in 2000"


Journal ArticleDOI
TL;DR: The focuss of this review is on the high molecular weight PAH benzo[a]pyrene (BaP), which has been observed to accumulate in marine organisms and plants which could indirectly cause human exposure through food consumption.

1,055 citations


Journal ArticleDOI
TL;DR: It is demonstrated that it may be possible to use a sequential anaerobic-aerobic process to completely degrade TBBPA in contaminated soils.
Abstract: Tetrabromobisphenol A (TBBPA) is a flame retardant that is used as an additive during manufacturing of plastic polymers and electronic circuit boards. Little is known about the fate of this compound in the environment. In the current study we investigated biodegradation of TBBPA, as well as 2,4,6-tribromophenol (TBP), in slurry of anaerobic sediment from a wet ephemeral desert stream bed contaminated with chemical industry waste. Anaerobic incubation of the sediment with TBBPA and peptone-tryptone-glucose-yeast extract medium resulted in a 80% decrease in the TBBPA concentration and accumulation of a single metabolite. This metabolite was identified by gas chromatography-mass spectrometry (GC-MS) as nonbrominated bisphenol A (BPA). On the other hand, TBP was reductively dehalogenated to phenol, which was further metabolized under anaerobic conditions. BPA persisted in the anaerobic slurry but was degraded aerobically. A gram-negative bacterium (strain WH1) was isolated from the contaminated soil, and under aerobic conditions this organism could use BPA as a sole carbon and energy source. During degradation of BPA two metabolites were detected in the culture medium, and these metabolites were identified by GC-MS and high-performance liquid chromatography as 4-hydroxybenzoic acid and 4-hydroxyacetophenone. Both of those compounds were utilized by WH1 as carbon and energy sources. Our findings demonstrate that it may be possible to use a sequential anaerobic-aerobic process to completely degrade TBBPA in contaminated soils.

247 citations


Journal ArticleDOI
TL;DR: The kinetics study demonstrated that the biodegradation of three phthalates conformed to the first-order model with respect to their concentrations, and appeared to be related to the length of the alkyl-side chains.

157 citations


Journal ArticleDOI
TL;DR: Quantitative biodegradation assays were performed with fungal strains, showing that diuron was degraded but not entirely mineralized, suggesting that duron is of higher environmental concern than previously recognized.
Abstract: Microbial degradation, organic synthesis and ecotoxicology were used to investigate the fate of diuron after spreading on soils. Quantitative biodegradation assays were performed with fungal strains, showing that diuron was degraded but not entirely mineralized. The modifications observed consisted in demethylation of the terminal nitrogen atom. The identified metabolites were synthesized in sufficient amounts to confirm their structures and determine their non-target toxicity using four biotests. The two metabolites exhibited higher effects than parent diuron. This limited biodegradability and potential aquatic toxicity suggest that diuron is of higher environmental concern than previously recognized.

154 citations


Journal ArticleDOI
TL;DR: Isolates that grew on JP8 jet fuel were characterised for their ability to degrade aromatic and aliphatic hydrocarbons and for growth at a range of temperatures.
Abstract: Hydrocarbons persist in Antarctic soils when fuel oils such as JP8 jet fuel are spilled. For clean-up of hydrocarbon-contaminated soils in Antarctica, bioremediation has been proposed using hydrocarbon-degrading microbes indigenous to Antarctic soils. A number of alkane-degrading bacteria have been isolated previously from Antarctic soils. In this paper we describe the direct isolation of aromatic hydrocarbon-degrading bacteria from oil-contaminated Antarctic soil. Isolates that grew on JP8 jet fuel were characterised for their ability to degrade aromatic and aliphatic hydrocarbons and for growth at a range of temperatures. All isolates were gram-negative, oxidase-positive, rod-shaped bacteria. Representative strains were identified using 16S rDNA sequence analysis as either Sphingomonas spp. or Pseudomonas spp. Aromatic-degrading bacteria from Antarctic soils were psychrotolerant and appear similar to those found worldwide.

133 citations


Journal ArticleDOI
TL;DR: Evidence from laboratory studies suggests that benzene may be anaerobically degraded in petroleum-contaminated marine sediments under sulfate-reducing conditions, and molecular phylogenetic studies have provided indications of what microorganisms might be involved in anaerobic benzene degradation in aquifers.
Abstract: Although many studies have indicated that benzene persists under anaerobic conditions in petroleum-contaminated environments, it has recently been documented that benzene can be anaerobically oxidized with most commonlyconsidered electron acceptors for anaerobic respiration. These include: Fe(III),sulfate, nitrate, and possibly humic substances. Benzene can also be convertedto methane and carbon dioxide under methanogenic conditions. There is evidencethat benzene can be degraded under in situ conditions in petroleum-contaminatedaquifers in which either Fe(III) reduction or methane production is the predominant terminal electron-accepting process. Furthermore, evidence from laboratory studies suggests that benzene may be anaerobically degraded in petroleum-contaminated marine sediments under sulfate-reducing conditions. Laboratory studies have suggested that within the Fe(III) reduction zone of petroleum-contaminated aquifers, benzene degradation can be stimulated with the addition of synthetic chelators which make Fe(III) more available for microbial reduction. The addition of humic substances and other compounds that contain quinone moieties can also stimulate anaerobic benzene degradation in laboratory incubations of Fe(III)-reducing aquifer sediments by providing an electron shuttle between Fe(III)-reducing microorganisms and insoluble Fe(III) oxides. Anaerobic benzene degradation in aquifer sediments can be stimulated with the addition of sulfate, but in some instances an inoculum of benzene-oxidizing,sulfate-reducing microorganisms must also be added. In a field trial, sulfate addition to the methanogenic zone of a petroleum-contaminated aquifer stimulated the growth and activity of sulfate-reducing microorganisms and enhanced benzene removal. Molecular phylogenetic studies have provided indications of what microorganisms might be involved in anaerobic benzene degradation in aquifers. The major factor limiting further understanding of anaerobic benzene degradation is the lack of a pure culture of an organism capable of anaerobic benzene degradation.

124 citations


Journal ArticleDOI
TL;DR: An old PAH/creosote contaminated soil from a former gas work site in Stockholm, Sweden, has been treated at 20 °C with the addition of various nutrients and inoculated with bacteria to enhance the degradation of selected hydrocarbons.
Abstract: An old PAH/creosote contaminated soil (total ∼300 μg PAH/g soil) from a former gas work site in Stockholm, Sweden, has been treated at 20 °C with the addition of various nutrients and inoculated with bacteria (isolated from the soil) to enhance the degradation of selected hydrocarbons. Microcosm studies showed that the soil consisted of two contaminant fractions: one available, easily degraded fraction and a strongly sorbed, recalcitrant one. The bioavailable fraction, monitored by headspace solid phase microextraction, contained aromatics with up to three rings, and these were degraded within 20 days down to non-detectable levels (ng PAH/g soil) by both the indigenous bacteria and the externally inoculated samples. The nutrient additives were: a minimal medium (Bushnell-Haas), nitrate, nitrite, potting soil (Anglamark, Sweden), sterile water and aeration with Bushnell-Haas medium. After 30 days treatment most of the sorbed fractions were still present in the soil. Stirring or mechanical mixing of the soil slurries had the greatest effect on degradation, indicating that the substances were too strongly sorbed for the microorganisms. When stirring the choice of nutrient seemed less important. For the non-stirred samples the addition of nitrate with the bacterial inoculum showed the best degradation, compared to the other non-stirred samples. At the end of the experiments, accumulations of metabolites/degradation products, such as 9H-fluorenone, 4-hydroxy-9H-fluorenone, 9,10-phenanthrenedione and 4H-cyclopenta[def]phenanthrenone were detected. The metabolite 4-hydroxy-9H-fluorenone increased by several orders of magnitude during the biological treatments. Microbial activity in the soil was measured by oxygen consumption and carbon dioxide production.

122 citations


Journal ArticleDOI
TL;DR: The two main problems of biological soil remediation techniques, longer process time and residual pollutants, may be solved by the use of surfactants.

116 citations


Journal ArticleDOI
TL;DR: The microbial degradation of polychlorinated biphenyls (PCBs) has been extensively conducted by many workers, and the evolved enzymes exhibit wide and enhanced degradation capacities for PCBs and other aromatic compounds.
Abstract: The microbial degradation of polychlorinated biphenyls (PCBs) has been extensively conducted by many workers, and the following general results have been obtained. (1) PCBs are degraded oxidatively by aerobic bacteria and other microorganisms such as white rot fungi. PCBs are also reductively dehalogenated by anaerobic microbial consortia. (2) The biodegradability of PCBs is highly dependent on chlorine substitution, i.e., number and position of chlorine. The degradation and dehalogenation capabilities are also highly strain dependent. (3) Biphenyl-utilizing bacteria can cometabolize many PCB congeners to chlorobenzoates by biphenl-catabolic enzymes. (4) Enzymes involved in the PCB degradation were purified and characterized. Biphenyl dioxygenase, ring-cleavage dioxygenase, and hydrolase are crystallized, and two ring-cleavage dioxygenases are being solved by x-ray crystallography. (5) The bph gene clusters responsible for PCB degradation are cloned from a variety of bacterial strains. The structure and function are analyzed with respect to the evolutionary relationship. (6) The molecular engineering of biphenyl dioxygenases is successfully performed by DNA shuffling, domain exchange, and subunit exchange. The evolved enzymes exhibit wide and enhanced degradation capacities for PCBs and other aromatic compounds.

109 citations


Journal ArticleDOI
TL;DR: The results demonstrated that there is a considerable potential for oil bioremediation in Alpine soils, and that a complete oil elimination is not possible by employing biological decontamination alone.

106 citations


Journal ArticleDOI
TL;DR: In this paper, the effects of organic contaminants by natural organic matter (NOM) often limits substrate bioavailability and is an important factor affecting microbial degradation rates in soils and sediments.
Abstract: The sorption of organic contaminants by natural organic matter (NOM) often limits substrate bioavailability and is an important factor affecting microbial degradation rates in soils and sediments. We hypothesized that reduced substrate bioavailability might influence which microbial assemblages are responsible for contaminant degradation under enrichment culture conditions. Our primary goal was to characterize enrichments in which different model organic solid phases were used to establish a range of phenanthrene bioavailabilities for soil microorganisms. Phenanthrene sorption coefficients (expressed as log KD values) ranged from 3.0 liters kg 21 for Amberlite carboxylic acid cation-exchange resin (AMB) to 3.5 liters kg 21 for Biobeads polyacrylic resin (SM7) and 4.2 liters kg 21 for Biobeads divinyl benzene resin (SM2). Enrichment cultures were established for control (no sorptive phase), sand, AMB, SM7, and SM2 treatments by using two contaminated soils (from Dover, Ohio, and Libby, Mont.) as the initial inocula. The effects of sorption by model phases on the degradation of phenanthrene were evaluated for numerous transfers in order to obtain stable microbial assemblages representative of sorptive and nonsorptive enrichment cultures and to eliminate the effects of the NOM present in the initial inoculum. Phenanthrene degradation rates were similar for each soil inoculum and ranged from 4 to 5 mmol day 21 for control and sand treatments to approximately 0.4 mmol day 21 in the presence of the SM7 sorptive phase. The rates of phenanthrene degradation in the highly sorptive SM2 enrichment culture were insignificant; consequently, stable microbial populations could not be obtained. Bacterial isolates obtained from serial dilutions of enrichment culture samples exhibited significant differences in rates of phenanthrene degradation performed in the presence of SM7, suggesting that enrichments performed in the presence of a sorptive phase selected for different microbial assemblages than control treatments containing solid phase phenanthrene.

Journal ArticleDOI
TL;DR: In this paper, the BAC (Biological Activated Carbon) system was used to enrich indigenous microbes to enhance bioremediation rates in the laboratory, which used the large surface area and sorption characteristics to fix bacteria and media, and effectively culture and enrich the microbes.

Journal ArticleDOI
TL;DR: The results are consistent with the hypothesis that different Phenanthrene-utilizing bacteria inhabiting the same soils may be adapted to different phenanthrene bioavailabilities.
Abstract: Reduced bioavailability of nonpolar contaminants due to sorption to natural organic matter is an important factor controlling biodegradation of pollutants in the environment. We established enrichment cultures in which solid organic phases were used to reduce phenanthrene bioavailability to different degrees (R. J. Grosser, M. Friedrich, D. M. Ward, and W. P. Inskeep, Appl. Environ. Microbiol. 66:2695-2702, 2000). Bacteria enriched and isolated from contaminated soils under these conditions were analyzed by denaturing gradient gel electrophoresis (DGGE) and sequencing of PCR-amplified 16S ribosomal DNA segments. Compared to DGGE patterns obtained with enrichment cultures containing sand or no sorptive solid phase, different DGGE patterns were obtained with enrichment cultures containing phenanthrene sorbed to beads of Amberlite IRC-50 (AMB), a weak cation-exchange resin, and especially Biobead SM7 (SM7), a polyacrylic resin that sorbed phenanthrene more strongly. SM7 enrichments selected for mycobacterial phenanthrene mineralizers, whereas AMB enrichments selected for a Burkholderia sp. that degrades phenanthrene. Identical mycobacterial and Burkholderia 16S rRNA sequence segments were found in SM7 and AMB enrichment cultures inoculated with contaminated soil from two geographically distant sites. Other closely related Burkholderia sp. populations, some of which utilized phenanthrene, were detected in sand and control enrichment cultures. Our results are consistent with the hypothesis that different phenanthrene-utilizing bacteria inhabiting the same soils may be adapted to different phenanthrene bioavailabilities.

Journal ArticleDOI
TL;DR: The University of Minnesota Biocatalysis/Biodegradation Database begins its fifth year having met its initial goals and is poised to grow in many different ways, including mirror sites; fold prediction for its sequenced enzymes; closer ties to genome and microbial strain databases; and the prediction of biodegradation pathways for compounds it does not contain.
Abstract: The University of Minnesota Biocatalysis/Biodegradation Database (http://www.labmed.umn.edu/umbbd/ ) begins its fifth year having met its initial goals. It contains ~100 pathways for microbial catabolic metabolism of primarily xenobiotic organic compounds, including information on ~650 reactions, 600 compounds and 400 enzymes, and containing ~250 microorganism entries. It includes information on most known microbial catabolic reaction types and the organic functional groups they transform. Having reached its first goals, it is ready to move beyond them. It is poised to grow in many different ways, including mirror sites; fold prediction for its sequenced enzymes; closer ties to genome and microbial strain databases; and the prediction of biodegradation pathways for compounds it does not contain.

Journal ArticleDOI
TL;DR: In this article, a combined chemical and biological investigation of the relative rates of weathering and biodegradation of oil spilled in sediments and testing the influence of a bioremediation protocol was conducted.


Journal ArticleDOI
TL;DR: Biofilm reactors are particularly suitable for the treatment of large amounts of diluted effluent, such as groundwater contaminated with scarcely soluble pollutants, and physical adsorption could help with the formation of a biofilm at an early stage of the treatment.
Abstract: Biofilm reactors are particularly suitable for the treatment of large amounts of diluted effluent, such as groundwater contaminated with scarcely soluble pollutants. A packed-bed column reactor was tested for the degradation of acenaphthene, phenanthrene and pyrene provided at their aqueous solubility concentrations. Acenapthene and phenanthrene were removed to more than 99% efficiency from this reactor whilst pyrene was removed to 90%. Pollutant disappearance was also recorded in the control reactor and was probably caused by the adsorption of pollutants into the reactor. The measurement of oxygen consumption in both reactors confirmed that microbial degradation of the pollutants was indeed occurring in the inoculated reactor. Physical adsorption is not however unwanted, as it could help with the formation of a biofilm at an early stage of the treatment.

Book
09 Jun 2000
TL;DR: Bioremediation techniques and methods used to study biodegradability additives affecting the microbial degradation of petroleum hydrocarbons intrinsic biodegradation of benzene in contaminated groundwater are illustrated.
Abstract: Bioremediation techniques: towards an ecosystem approach to remediation in the Great Basin experimental investigations on in-situ bioremediation of an aquifer contaminated with ammonium remediation of hexavalent chromium by biosorption bioregeneration of contaminated absorbents containing hazardous wastes efficiency of cyperus corymbosus, typha angustifolia, phragmites, australis, and eleocharis dulcis in constructed wetlands for chromium treatment of electroplating industrial wastewater microbiological peculiarities of cattle waste transformation into food additions the increase of pea cells sensitivity to chemical compounds during chromatin activation periods modification of biological process of treatment - real way to improve effluent. Bioremediation of hydrocarbon contaminated materials: biodegradation of PCBs in aqueous and soil systems biosurfactant production by indigenous soil microbes degrading BEPH and lubricating oil potential of plant-microbial interactions for in-situ bioremediation of hydrocarbon-contaminated soils concurrent fuel and chlorinated solvent remediation -bioslurping free product and monitored natural attenuation of the soluble plume biodegradation of crude oil in cold climate conditions - summary of the methods used to study biodegradability additives affecting the microbial degradation of petroleum hydrocarbons intrinsic biodegradation of benzene in contaminated groundwater - a case study illustrating the application of numerical modelling. Soil-specific bioremediation techniques: bioaugmentation for soil bioremediation degradation of aromatic xenobiotics in soil by enzyme systems of microorganisms and plants removal of heavy oil sludge contamination by composing bioremediation of TNT-contaminated soil in-situ remediation of contaminated soils by bioelectrokinetic remediation and other competitive technologies aerobic biodegradation kinetics and soil gas transport in the unsaturated zone. (Part contents).

Journal ArticleDOI
TL;DR: The enzyme initiating this degradation (methylenediurease) was purified and turned out to be different from the previously described enzyme from Ochrobactrum anthropi with regard to its regulation of expression and physicobiochemical properties.
Abstract: Methyleneureas are condensation products of urea and formaldehyde of different molecular mass and solubility; they are used in large amounts both as resins, binders, and insulating materials for industrial applications, as well as a slow-release nitrogen fertilizer for greens, lawns, or in bioremediation processes. In the present study, the microbial breakdown of these products was investigated. The nitrogen was released as ammonia and urea, and the formaldehyde released immediately oxidized via formiate to carbon dioxide. The enzymatic mechanism of metabolization of methyleneureas was studied in microorganisms isolated from soil, which were able to use these compounds as the sole source of nitrogen for growth. A strain of the Gram-negative bacterium Ralstonia paucula (formerly Alcaligenes sp. CDC group IVc-2) completely degraded methylenediurea and dimethylenetriurea to urea, ammonia, formaldehyde, and carbon dioxide. The enzyme initiating this degradation (methylenediurease) was purified and turned out to be different from the previously described enzyme from Ochrobactrum anthropi with regard to its regulation of expression and physicobiochemical properties. Fungal degradation of methyleneureas may occur via the formation of organic acids, thus leading to a nonenzymatic degradation of methyleneureas, which are unstable under acidic conditions.

Journal ArticleDOI
Katsuhiko Fujii1, Naoto Urano1, Shigeru Kimura1, Yoko Nomura1, Isao Karube1 
TL;DR: Researchers studied microbial consortia with nonylphenol (NP)-degrading activities from various aquatic environments in Tokyo and observed microbes with notable activity in Tokyo Bay and waste water of a sewage treatment plant.
Abstract: SUMMARY: We studied microbial consortia with nonylphenol (NP)-degrading activities from various aquatic environments in Tokyo. The microbes with notable activity were observed in two locations: Tokyo Bay and waste water of a sewage treatment plant. For the first sample’s microbes, about 70% of NP was degraded in 45 days’ incubation at 25°C in the medium containing NP (1000 ppm) as a sole carbon source. For the second sample’s microbes, NP was almost completely degraded in 30 days and succeeded several times with the increase of the degrading activities. In another medium in which the NP/glucose mole ratio was 1, the degrading activities were not affected by glucose.

Journal ArticleDOI
TL;DR: The utilization of essential oils together with the common occurrence of this metabolic trait are indications for anenvironmentally important, but currently unexploredanaerobic turnover of plant volatile organic compounds in soil.
Abstract: Plant volatile organic compounds are a major carbon source in nature. We studied the degradability of these substances by anaerobic microorganisms in enrichment cultures with representative essential oils as organic substrates and nitrate as electron acceptor. Lemon and pine needle oil supported microbial growth in the presence of pure oil, whereas parsley seed, camphor, sage, fennel, and mint oil supported growth only when the essential oils were dissolved in an overlying phase of 2,2,4,4,6,8,8-heptamethylnonane. Thyme oil did not support denitrification. Analyses of the microbially degraded oils revealed the disappearance of monoterpenes, of several monoterpenoids, and of methoxy-propenyl-benzenes, including apiole and myristicin. Most-probable-number determinations for denitrifying communities in sewage sludge and forest soil yielded 10(6) to 10(7) monoterpene-utilizing cells ml(-1), representing 0.7 to 100% of the total cultivable nitrate-reducing microorganisms. The utilization of essential oils together with the common occurrence of this metabolic trait are indications for an environmentally important, but currently unexplored anaerobic turnover of plant volatile organic compounds in soil.

Journal ArticleDOI
TL;DR: In this paper, the degradation of chlorothalonil residues in different types of agricultural soil was investigated in the laboratory, and the results indicated that indigenous soil bacteria were able to utilize chlorothalil, although the rate of degradation appeared to be influenced by soil characteristics.
Abstract: The employment of pesticides for crop protection must be balanced by a total awareness of the detrimental effects they may have on the environment. Pesticide residues in soil, and metabolites resulting from microbial metabolism of such compounds, may contribute to pollution of streams, affect microbial diversity, and influence essential symbiotic associations between microorganisms and crops. Chlorothalonil, an extensively used fungicide, is classified as a probable human carcinogen by the US EPA. Microbial degradation of chlorothalonil residues in different types of agricultural soil was investigated in the laboratory. Bacterial plate count and GC analysis results indicated that indigenous soil bacteria were able to utilize chlorothalonil, although the rate of chlorothalonil metabolism appeared to be influenced by soil characteristics.


Journal ArticleDOI
TL;DR: In this paper, two commercial nonionic surfactants of the polyethoxylate type, Prawozell F1214/5 N and Sapogenat T-300, were used.
Abstract: During the microbial treatment of a sandy model soil artificially contaminated with polycyclic aromatic hydrocarbons (PAHs), a large residual pollution was found. The remaining PAHs were sorbed into the micropores of the soil and were therefore not bioavailable. Using a lab-scale percolator, the microbially pretreated soil was subjected to aftertreatment with surfactants with the aim of further degradation of its pollution. Two commercial nonionic surfactants of the polyethoxylate type, Prawozell F1214/5 N and Sapogenat T-300, were used. The surfactants differ both in their physicochemical properties (CMC value, PAH solubilization capacity, adsorption onto soil) and in their microbial degradability. During aftertreatment under permanently aerobic conditions, only a weak PAH accumulation in the liquid phase was observed, which was due to a low solubilization rate as well as to simultaneous microbial degradation of the dissolved PAHs. Temporary anaerobiosis successfully suppressed the microbial degradation of both the surfactant and the solubilized PAHs, resulting in a more intensive PAH accumulation. But the PAH content of the soil - the essential criterion for evaluating the efficiency of surfactant application - was not decreased to a larger extent with surfactants than without them. To find out why the surfactants failed to act, the surfactant and hydrocarbon distribution among the liquid and solid phases was studied in mixtures of phenanthrene-spiked soils and Prawozell-containing liquids; at heavy phenanthrene loading, the aqueous phase was saturated with PAH; at weak loading, it was unsaturated. Model-aided data analysis showed that the soil may contain PAH in two fractions: strongly sorbed into soil pores and, in the case of heavy loading, also weakly attached to the soil surface. The latter is easily extractable, resulting in a PAH-saturated liquid, while strongly adsorbed PAH is only partially dissolved due to competition between the micelles and the soil pores for the PAH. The microbially pretreated soil contains only strongly bound PAHs, which are as difficult to extract by surfactants as they are poorly accessible for microbes.

Journal ArticleDOI
TL;DR: In this article, the authors examined the biodegradation kinetics of trichloroethylene (TCE) and toluene in soil under aerobic conditions by conducting three groups of experiments in soil.
Abstract: Trichloroethylene (TCE) biodegradation in soil under aerobic conditions requires the presence of another compound, such as toluene, to support growth of microbial populations and enzyme induction. The biodegradation kinetics of TCE and toluene were examined by conducting three groups of experiments in soil: toluene only, toluene combined with low TCE concentrations, and toluene with TCE concentrations similar to or higher than toluene. The biodegradation of TCE and toluene and their interrelationships were modeled using a combination of several biodegradation functions. In the model, the pollutants were described as existing in the solid, liquid, and gas phases of soil, with biodegradation occurring only in the liquid phase. The distribution of the chemicals between the solid and liquid phase was described by a linear sorption isotherm, whereas liquid-vapor partitioning was described by Henry's law. Results from 12 experiments with toluene only could be described by a single set of kinetic parameters. The same set of parameters could describe toluene degradation in 10 experiments where low TCE concentrations were present. From these 10 experiments a set of parameters describing TCE cometabolism induced by toluene also was obtained. The complete set of parameters was used to describe the biodegradation of both compounds in 15more » additional experiments, where significant TCE toxicity and inhibition effects were expected. Toluene parameters were similar to values reported for pure culture systems. Parameters describing the interaction of TCE with toluene and biomass were different from reported values for pure cultures, suggesting that the presence of soil may have affected the cometabolic ability of the indigenous soil microbial populations.« less

Journal ArticleDOI
TL;DR: In conventional liquid culture, atrazine and its two dealkylated by-products were equally metabolised by the microbial consortium and did not initially exhibit the capacity to degrade diuron, which was used as reference compound.
Abstract: The potential of a microbial consortium for treating waters contaminated with atrazine was considered. In conventional liquid culture, atrazine and its two dealkylated by-products were equally metabolised by the microbial consortium. Transient production of hydroxyatrazine was observed during atrazine catabolism, indicating that the catabolic pathway was similar to the one reported for isolates capable of atrazine mineralisation. This consortium was then inoculated to sediments sampled from an artificial recharge site. These sediments were contaminated by atrazine and diuron and exhibited only a slow endogenous herbicide dissipation. Inoculated microorganisms led to extensive atrazine degradation and survived for more than 10 weeks in the sediments. A rudimentary bioreactor was then setup using a soil core originating from the same recharge site. Degrading microorganisms rapidly colonised the core and expressed their degrading activity. The efficiency of the bioreactor was improved in the presence of spiked environmental surface waters. Atrazine degraders thus possibly benefited from the other organic sources in developing and expressing their activity. The microbial consortium did not initially exhibit the capacity to degrade diuron, which was used as reference compound. No change in this characteristic was detected throughout the study.

Journal ArticleDOI
TL;DR: Among those factors investigated, aerobic and anaerobic conditions, availability of co‐metabolites, and pre‐exposure of microorganisms to the test chemical were found to be the most significant elements in controlling the rate of biodegradation.
Abstract: Microbial degradation is one of the most important processes responsible for the removal of chemical contaminants from the environment. Since the aquatic compartment is frequently the ultimate depository for many man-made substances, there is a need to understand factors that control andlor affect the rate of biodegradation for chemical substances in the aquatic environment. In this study, several priority chemicals encompassing various biocides (2,4-dichlorophenoxy acetic acid, carbaryl, fenitrothion, pentachlorophenol) and a nitroaromatic (2,4-dinitrotoluene) were assessed for their biodegradability in cyclone fermentors under aerobic and anaerobic conditions, with and without co-metabolites. Among those factors investigated, aerobic and anaerobic conditions, availability of co-metabolites, and pre-exposure of microorganisms to the test chemical were found to be the most significant elements in controlling the rate of biodegradation. Other factors (e.g., acclimation period) requirinq attention in calculatinq the rate of biodeqradation were also discussed.

Journal ArticleDOI
TL;DR: The experimental evidence of the positive effect of chemical oxidation pretreatment on the biodegradation of recalcitrant compounds was quantified by estimation of the kinetic parameters of the Monod equation employed in biodegrades of the wastewater.

Journal ArticleDOI
TL;DR: In this article, the effects of cold storage on the biodegradation of a series of test polymers was investigated using two soils, a synthetic soil mix (SM-L8) and a field soil (Bridgehampton silt loam) from Rhode Island (RI-1).
Abstract: Soil retrieval, processing and storage procedures can have a profound effect on soil microorganisms. In particular, changes in soil microbial populations may adversely affect the biological activity of a soil and drastically alter the soil's potential to mineralize added substrates. The effects of cold storage on the biodegradation of a series of test polymers was investigated using two soils—a synthetic soil mix (SM-L8) and a field soil (Bridgehampton silt loam) from Rhode Island (RI-1). Biodegradation tests were conducted using freshly prepared/collected soil and again following storage at 4°C for 3 to 8 months. Prior to each biodegradation test, the soils were incubated at 60% water-holding capacity (WHC) and 25°C to rejuvenate the microbial populations; the soils were incubated for periods of 48 h (freshly collected soil) or 25 days (soils stored at 4°C). Soil microbial populations were assessed by enumerating different segments of the population on agar plates containing different selective media. Mineralization of the test polymers (cellulose, poly-3-hydroxybutyrate, and starch acetate, d.s. 1.5) was monitored using standard respirometric techniques. Our results demonstrated that cold storage had a generally negative effect on the soil microbial populations themselves but that its effect on the capacity of the soil microorganisms to degrade the test polymers varied between soils and polymer type. Whereas cold storage resulted in dramatic shifts in the community structure of the soil microbial populations, substantial restoration of these populations was possible by first conditioning the soils at 60% WHC and ambient temperatures for 25 days. Likewise, although the effects of cold storage on polymer mineralization varied with the test polymer and soil, these effects could be largely offset by including an initial 25-day stabilization period in the test.

01 Jan 2000
TL;DR: Microbial degradation of PAHs is considered to be the major decomposition process for these contaminants in nature and is of great practical interest for implementation of bioremediation.
Abstract: Microbial degradation of PAHs is considered to be the major decomposition process for these contaminants in nature and is of great practical interest for implementation of bioremediation. The reviews on the foundation of bioremediation biodegradation:the isolation and purification of degraded bacteria, microbial community, degradation mechanism and methods were done. The prospects on this field are discussed.