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Showing papers on "Numerical analysis published in 2007"


Book
23 Dec 2007
TL;DR: Optimization Algorithms on Matrix Manifolds offers techniques with broad applications in linear algebra, signal processing, data mining, computer vision, and statistical analysis and will be of interest to applied mathematicians, engineers, and computer scientists.
Abstract: Many problems in the sciences and engineering can be rephrased as optimization problems on matrix search spaces endowed with a so-called manifold structure. This book shows how to exploit the special structure of such problems to develop efficient numerical algorithms. It places careful emphasis on both the numerical formulation of the algorithm and its differential geometric abstraction--illustrating how good algorithms draw equally from the insights of differential geometry, optimization, and numerical analysis. Two more theoretical chapters provide readers with the background in differential geometry necessary to algorithmic development. In the other chapters, several well-known optimization methods such as steepest descent and conjugate gradients are generalized to abstract manifolds. The book provides a generic development of each of these methods, building upon the material of the geometric chapters. It then guides readers through the calculations that turn these geometrically formulated methods into concrete numerical algorithms. The state-of-the-art algorithms given as examples are competitive with the best existing algorithms for a selection of eigenspace problems in numerical linear algebra. Optimization Algorithms on Matrix Manifolds offers techniques with broad applications in linear algebra, signal processing, data mining, computer vision, and statistical analysis. It can serve as a graduate-level textbook and will be of interest to applied mathematicians, engineers, and computer scientists.

2,586 citations


Book
15 Mar 2007
TL;DR: This book is written to assist engineering students and practicing engineers new to the field of finite element modeling, to gain a clear understanding of the fundamentals of finiteelement modeling.
Abstract: From the Publisher: In recent years, the use of finite element analysis as a design tool has grown rapidly. Easy to use comprehensive packages such as ANSYS, a general-purpose finite element computer program, have become common tools in the hands of engineers. This book is written to assist engineering students and practicing engineers new to the field of finite element modeling, to gain a clear understanding of the fundamentals of finite element modeling. The text offers insight into the theoretical aspects of finite element analysis and great care has been exercised to avoid overwhelming students with theory. Yet, enough theoretical background is offered to allow individuals to use ANSYS intelligently and effectively. ANSYS is an integral part of this text.

827 citations


Journal ArticleDOI
TL;DR: It is explained how special structure of the weight matrix and the data matrix can be exploited for efficient cost function and first derivative computation that allows to obtain computationally efficient solution methods.

745 citations


Book
01 Jan 2007
TL;DR: Linear Equations and Optimal Control: Linear, Degenerate Backward Stochastic Partial Di erential Equations (Linear FBSDEs) as mentioned in this paper.
Abstract: Linear Equations.- Method of Optimal Control.- Four Step Scheme.- Linear, Degenerate Backward Stochastic Partial Di erential Equations.- The Method of Continuation.- FBSDEs with Reflections.- Applications of FBSDEs.- Numerical Methods for FBSDEs.

740 citations


Journal ArticleDOI
TL;DR: A new method that uses noisy measurements on a subset of variables to estimate the parameters defining a system of non‐linear differential equations, based on a modification of data smoothing methods along with a generalization of profiled estimation is described.
Abstract: Summary We propose a new method for estimating parameters in models that are defined by a system of non-linear differential equations Such equations represent changes in system outputs by linking the behaviour of derivatives of a process to the behaviour of the process itself Current methods for estimating parameters in differential equations from noisy data are computationally intensive and often poorly suited to the realization of statistical objectives such as inference and interval estimation The paper describes a new method that uses noisy measurements on a subset of variables to estimate the parameters defining a system of non-linear differential equations The approach is based on a modification of data smoothing methods along with a generalization of profiled estimation We derive estimates and confidence intervals, and show that these have low bias and good coverage properties respectively for data that are simulated from models in chemical engineering and neurobiology The performance of the method is demonstrated by using real world data from chemistry and from the progress of the autoimmune disease lupus

622 citations


Journal ArticleDOI
TL;DR: In this paper, a comparison of grid and smoothed particle hydrodynamics (SPH) was carried out by investigating their performance in modelling interacting multiphase fluids, and it was shown that SPH introduces spurious pressure forces on particles in regions where there are steep density gradients.
Abstract: We have carried out a comparison study of hydrodynamical codes by investigating their performance in modelling interacting multiphase fluids. The two commonly used techniques of grid and smoothed particle hydrodynamics (SPH) show striking differences in their ability to model processes that are fundamentally important across many areas of astrophysics. Whilst Eulerian grid based methods are able to resolve and treat important dynamical instabilities, such as Kelvin-Helmholtz or Rayleigh-Taylor, these processes are poorly or not at all resolved by existing SPH techniques. We show that the reason for this is that SPH, at least in its standard implementation, introduces spurious pressure forces on particles in regions where there are steep density gradients. This results in a boundary gap of the size of an SPH smoothing kernel radius over which interactions are severely damped.

620 citations


Journal ArticleDOI
TL;DR: In this paper, the authors extended the reduced-basis approximations developed earlier for linear elliptic and parabolic partial differential equations with affine parameter dependence to problems in volving.
Abstract: In this paper, we extend the reduced-basis approximations developed earlier for linear elliptic and parabolic partial differential equations with affine parameter dependence to problems in- volving (a) nonaffine dependence on the parameter, and (b) nonlinear dependence on the field variable. The method replaces the nonaffine and nonlinear terms with a coefficient function approximation which then permits an efficient offline-online computational decomposition. We first review the coefficient function approximation procedure: the essential ingredients are (i) a good collateral reduced-basis approximation space, and (ii) a stable and inexpensive interpolation procedure. We then apply this approach to linear nonaffine and nonlinear elliptic and parabolic equations; in each instance, we discuss the reduced-basis approximation and the associated offline-online computational procedures. Numeri- cal results are presented to assess our approach.

532 citations


Journal ArticleDOI
TL;DR: Extensions of this approach that can be applied in the setting of iterated approximate moving least squares approximation of function value data and for RBF pseudo-spectral methods for the solution of partial differential equations are discussed.
Abstract: Many radial basis function (RBF) methods contain a free shape parameter that plays an important role for the accuracy of the method. In most papers the authors end up choosing this shape parameter by trial and error or some other ad hoc means. The method of cross validation has long been used in the statistics literature, and the special case of leave-one-out cross validation forms the basis of the algorithm for choosing an optimal value of the shape parameter proposed by Rippa in the setting of scattered data interpolation with RBFs. We discuss extensions of this approach that can be applied in the setting of iterated approximate moving least squares approximation of function value data and for RBF pseudo-spectral methods for the solution of partial differential equations. The former method can be viewed as an efficient alternative to ridge regression or smoothing spline approximation, while the latter forms an extension of the classical polynomial pseudo-spectral approach. Numerical experiments illustrating the use of our algorithms are included.

521 citations


Journal ArticleDOI
Rob Stevenson1
TL;DR: An adaptive finite element method is constructed for solving elliptic equations that has optimal computational complexity and does not rely on a recurrent coarsening of the partitions.
Abstract: In this paper an adaptive finite element method is constructed for solving elliptic equations that has optimal computational complexity. Whenever, for some s > 0, the solution can be approximated within a tolerance e > 0 in energy norm by a continuous piecewise linear function on some partition with O(e-1/s) triangles, and one knows how to approximate the right-hand side in the dual norm with the same rate with piecewise constants, then the adaptive method produces approximations that converge with this rate, taking a number of operations that is of the order of the number of triangles in the output partition. The method is similar in spirit to that from [SINUM, 38 (2000), pp. 466-488] by Morin, Nochetto, and Siebert, and so in particular it does not rely on a recurrent coarsening of the partitions. Although the Poisson equation in two dimensions with piecewise linear approximation is considered, the results generalize in several respects.

467 citations


Journal ArticleDOI
TL;DR: A general scheme for trust-region methods on Riemannian manifolds is proposed and analyzed, and particular attention is paid to the truncated conjugate-gradient technique.
Abstract: A general scheme for trust-region methods on Riemannian manifolds is proposed and analyzed. Among the various approaches available to (approximately) solve the trust-region subproblems, particular attention is paid to the truncated conjugate-gradient technique. The method is illustrated on problems from numerical linear algebra.

452 citations


Journal ArticleDOI
TL;DR: A new class of fractional-order anisotropic diffusion equations for noise removal are introduced which are Euler-Lagrange equations of a cost functional which is an increasing function of the absolute value of the fractional derivative of the image intensity function.
Abstract: This paper introduces a new class of fractional-order anisotropic diffusion equations for noise removal. These equations are Euler-Lagrange equations of a cost functional which is an increasing function of the absolute value of the fractional derivative of the image intensity function, so the proposed equations can be seen as generalizations of second-order and fourth-order anisotropic diffusion equations. We use the discrete Fourier transform to implement the numerical algorithm and give an iterative scheme in the frequency domain. It is one important aspect of the algorithm that it considers the input image as a periodic image. To overcome this problem, we use a folded algorithm by extending the image symmetrically about its borders. Finally, we list various numerical results on denoising real images. Experiments show that the proposed fractional-order anisotropic diffusion equations yield good visual effects and better signal-to-noise ratio.

Journal ArticleDOI
TL;DR: The new method yields solutions in the zero gas density limit which are comparable in accuracy to the method in which the gas pressure was treated as spatially constant, thereby providing a speed-up over continuum or ''ghost-fluid'' methods.

Journal ArticleDOI
TL;DR: The third or fifth order of convergence of these variants of Newton's method for dimension one, and the second or third order in several variables, depending on the behaviour of the second derivative are proved.

Journal ArticleDOI
TL;DR: A new Lagrangian cell-centered scheme for two-dimensional compressible flows with main new feature of the introduction of four pressures on each edge, two for each node on each side of the edge, and a semidiscrete entropy inequality is provided.
Abstract: We present a new Lagrangian cell-centered scheme for two-dimensional compressible flows. The primary variables in this new scheme are cell-centered, i.e., density, momentum, and total energy are defined by their mean values in the cells. The vertex velocities and the numerical fluxes through the cell interfaces are not computed independently, contrary to standard approaches, but are evaluated in a consistent manner due to an original solver located at the nodes. The main new feature of the algorithm is the introduction of four pressures on each edge, two for each node on each side of the edge. This extra degree of freedom allows us to construct a nodal solver which fulfills two properties. First, the conservation of momentum and total energy is ensured. Second, a semidiscrete entropy inequality is provided. In the case of a one-dimensional flow, the solver reduces to the classical Godunov acoustic solver: it can be considered as its two-dimensional generalization. Many numerical tests are presented. They are representative test cases for compressible flows and demonstrate the robustness and the accuracy of this new solver.

Journal ArticleDOI
TL;DR: The ability of the method to simulate flows with complex, moving immersed boundaries is applied to calculate pulsatile, physiological flow through a mechanical, bileaflet heart valve mounted in a model straight aorta with an anatomical-like triple sinus.

Journal ArticleDOI
TL;DR: A new projection method to solve large-scale continuous-time Lyapunov matrix equations based on matrix factorizations, generated as a combination of Krylov subspaces in A and A^{-1}$.
Abstract: In this paper we propose a new projection method to solve large-scale continuous-time Lyapunov matrix equations. The new approach projects the problem onto a much smaller approximation space, generated as a combination of Krylov subspaces in $A$ and $A^{-1}$. The reduced problem is then solved by means of a direct Lyapunov scheme based on matrix factorizations. The reported numerical results show the competitiveness of the new method, compared to a state-of-the-art approach based on the factorized alternating direction implicit iteration.

Journal ArticleDOI
TL;DR: This numerical method combines the alternating directions implicit (ADI) approach with a Crank-Nicolson discretization and a Richardson extrapolation to obtain an unconditionally stable second-order accurate finite difference method.

Journal ArticleDOI
TL;DR: This paper presents a new result of stability analysis for continuous systems with two additive time-varying delay components, which represent a general class of delay systems with strong application background in network based control systems.


Journal ArticleDOI
TL;DR: In this article, the authors verify the linear streaming instability that arises from aerodynamic coupling between solids and gas in protoplanetary disks by using grid hydrodynamics to simulate the gas and particle and grid representations of the solids.
Abstract: We present local simulations that verify the linear streaming instability that arises from aerodynamic coupling between solids and gas in protoplanetary disks. This robust instability creates enhancements in the particle density in order to tap the free energy of the relative drift between solids and gas, generated by the radial pressure gradient of the disk. We confirm the analytic growth rates found by Youdin and Goodman using grid hydrodynamics to simulate the gas and, alternatively, particle and grid representations of the solids. Since the analytic derivation approximates particles as a fluid, this work corroborates the streaming instability when solids are treated as particles. The idealized physical conditions?axisymmetry, uniform particle size, and the neglect of vertical stratification and collisions?provide a rigorous, well-defined test of any numerical algorithm for coupled particle-gas dynamics in protoplanetary disks. We describe a numerical particle-mesh implementation of the drag force, which is crucial for resolving the coupled oscillations. Finally, we comment on the balance of energy and angular momentum in two-component disks with frictional coupling. A companion paper details the nonlinear evolution of the streaming instability into saturated turbulence with dense particle clumps.

Journal ArticleDOI
TL;DR: A six-step process for computer model validation is set out in Bayarri et al. (2007) based on comparison of computer model runs with field data of the process being modeled, which is particularly suited to treating the major issues associated with the validation process.
Abstract: A key question in evaluation of computer models is Does the computer model adequately represent reality? A six-step process for computer model validation is set out in Bayarri et al. [Technometrics 49 (2007) 138-154] (and briefly summarized below), based on comparison of computer model runs with field data of the process being modeled. The methodology is particularly suited to treating the major issues associated with the validation process: quantifying multiple sources of error and uncertainty in computer models; combining multiple sources of information; and being able to adapt to different, but related scenarios. Two complications that frequently arise in practice are the need to deal with highly irregular functional data and the need to acknowledge and incorporate uncertainty in the inputs. We develop methodology to deal with both complications. A key part of the approach utilizes a wavelet representation of the functional data, applies a hierarchical version of the scalar validation methodology to the wavelet coefficients, and transforms back, to ultimately compare computer model output with field output. The generality of the methodology is only limited by the capability of a combination of computational tools and the appropriateness of decompositions of the sort (wavelets) employed here. The methods and analyses we present are illustrated with a test bed dynamic stress analysis for a particular engineering system.

Journal ArticleDOI
TL;DR: In this paper, a new numerical code, ECHO, based on a Eulerian conservative high-order scheme for time dependent three-dimensional general relativistic magnetohydrodynamics (GRMHD) and magnetodynamics (GRMD), is presented.
Abstract: Aims. We present a new numerical code, ECHO, based on a Eulerian conservative high-order scheme for time dependent three-dimensional general relativistic magnetohydrodynamics (GRMHD) and magnetodynamics (GRMD). ECHO is aimed at providing a shock-capturing conservative method able to work at an arbitrary level of formal accuracy (for smooth flows), where the other existing GRMHD and GRMD schemes yield an overall second order at most. Moreover, our goal is to present a general framework based on the 3+1 Eulerian formalism, allowing for different sets of equations and different algorithms and working in a generic space-time metric, so that ECHO may be easily coupled to any solver for Einstein's equations. Methods. Our finite-difference conservative scheme previously developed for special relativistic hydrodynamics and MHD is extended here to the general relativistic case. Various high-order reconstruction methods are implemented and a two-wave approximate Riemann solver is used. The induction equation is treated by adopting the upwind constrained transport (UCT) procedures, appropriate to preserving the divergence-free condition of the magnetic field in shock-capturing methods. The limiting case of magnetodynamics (also known as force-free degenerate electrodynamics) is implemented by simply replacing the fluid velocity with the electromagnetic drift velocity and by neglecting the contribution of matter to the stress tensor. Results. ECHO is particularly accurate, efficient, versatile, and robust. It has been tested against several astrophysical applications, like magnetized accretion onto black holes and constant angular momentum thick disks threaded by toroidal fields. A novel test of the propagation of large-amplitude , circularly polarized Alfven waves is proposed, and this allows us to prove the spatial and temporal high-order properties of ECHO very accurately. In particular, we show that reconstruction based on a monotonicity-preserving (MP) filter applied to a fixed 5-point stencil gives highly accurate results for smooth solutions, both in flat and curved metric (up to the nominal fifth order), while at the same time providing sharp profiles in tests involving discontinuities.

Journal ArticleDOI
M.A. Abdou1
TL;DR: The extended tanh method with a computerized symbolic computation is used for constructing the travelling wave solutions of coupled nonlinear equations arising in physics and the obtained solutions include solitons, kinks and plane periodic solutions.

Journal ArticleDOI
TL;DR: New finite element methods for the approximation of the equations of linear elasticity in three space dimensions that produce direct approxima- tions to both stresses and displacements are constructed.
Abstract: In this paper, we construct new finite element methods for the approximation of the equations of linear elasticity in three space dimensions that produce direct approxima- tions to both stresses and displacements. The methods are based on a modified form of the Hellinger-Reissner variational principle that only weakly imposes the symmetry condition on the stresses. Although this approach has been previously used by a number of authors, a key new ingredient here is a constructive derivation of the elasticity complex starting from the de Rham complex. By mimicking this construction in the discrete case, we derive new mixed finite elements for elasticity in a systematic manner from known discretizations of the de Rham complex. These elements appear to be simpler than the ones previously derived. For example, we construct stable discretizations which use only piecewise linear elements to approximate the stress field and piecewise constant functions to approximate the displacement field.

Journal ArticleDOI
TL;DR: In this paper, He's variational iteration method is used for solving second-order initial value problems. This method is based on the use of Lagrange multipliers for identification of optimal value of a parameter in a functional.

Journal ArticleDOI
TL;DR: Both theoretical analysis and numerical experiments show the efficiency and effectiveness of the two-grid approach for solving multimodeling problems.
Abstract: We study numerical methods for solving a coupled Stokes-Darcy problem in porous media flow applications. A two-grid method is proposed for decoupling the mixed model by a coarse grid approximation to the interface coupling conditions. Error estimates are derived for the proposed method. Both theoretical analysis and numerical experiments show the efficiency and effectiveness of the two-grid approach for solving multimodeling problems. Potential extensions and future directions are discussed.

Journal ArticleDOI
TL;DR: It is shown that the increment-based computational approach gives locally quasi-optimal low-rank approximations that are well suited for numerical integration.
Abstract: For the low-rank approximation of time-dependent data matrices and of solutions to matrix differential equations, an increment-based computational approach is proposed and analyzed. In this method, the derivative is projected onto the tangent space of the manifold of rank-$r$ matrices at the current approximation. With an appropriate decomposition of rank-$r$ matrices and their tangent matrices, this yields nonlinear differential equations that are well suited for numerical integration. The error analysis compares the result with the pointwise best approximation in the Frobenius norm. It is shown that the approach gives locally quasi-optimal low-rank approximations. Numerical experiments illustrate the theoretical results.

Journal ArticleDOI
TL;DR: Two finite-difference algorithms are presented for studying the dynamics of spatially extended predator–prey interactions with the Holling type II functional response and logistic growth of the prey and there are implementational advantages of the methods.

Journal ArticleDOI
TL;DR: In this article, He's variational iteration method (VIM) and homotopy-perturbation method (HPM) are used to solve nonlinear heat transfer problems.

Journal ArticleDOI
TL;DR: In this article, the homotopy analysis method (HAM) was applied to solve heat transfer problems with high nonlinearity order, and the results were compared with the numerical Runge-Kutta methods and homotropic perturbation method (HPM).