Showing papers on "Soil organic matter published in 2018"

Soil aeration and its role for plants

Abstract: This book is directed to the interests of workers on soil aeration. Due to the interdisciplinary nature of the subject it may also be read by researchers, teachers, and students of agronomy, soil physics, soil chemistry, soil biology, ecology, and plant physiology.

Carbon input by roots into the soil: Quantification of rhizodeposition from root to ecosystem scale

Abstract: Despite its fundamental role for carbon (C) and nutrient cycling, rhizodeposition remains ‘the hidden half of the hidden half’: it is highly dynamic and rhizodeposits are rapidly incorporated into microorganisms, soil organic matter, and decomposed to CO2. Therefore, rhizodeposition is rarely quantified and remains the most uncertain part of the soil C cycle and of C fluxes in terrestrial ecosystems. This review synthesizes and generalizes the literature on C inputs by rhizodeposition under crops and grasslands (281 data sets). The allocation dynamics of assimilated C (after 13C-CO2 or 14C-CO2 labeling of plants) were quantified within shoots, shoot respiration, roots, net rhizodeposition (i.e., C remaining in soil for longer periods), root-derived CO2, and microorganisms. Partitioning of C pools and fluxes were used to extrapolate belowground C inputs via rhizodeposition to ecosystem level. Allocation from shoots to roots reaches a maximum within the first day after C assimilation. Annual crops retained more C (45% of assimilated 13C or 14C) in shoots than grasses (34%), mainly perennials, and allocated 1.5 times less C belowground. For crops, belowground C allocation was maximal during the first 1-2 months of growth and decreased very fast thereafter. For grasses, it peaked after 2-4 months and remained very high within the second year causing much longer allocation periods. Despite higher belowground C allocation by grasses (33%) than crops (21%), its distribution between various belowground pools remain very similar. Hence, the total C allocated belowground depends on the plant species, but its further fate is species independent. This review demonstrates that C partitioning can be used in various approaches, e.g. root sampling, CO2 flux measurements, to assess rhizodeposits’ pools and fluxes at pot, plot, field and ecosystem scale and so, to close the most uncertain gap of the terrestrial C cycle. This article is protected by copyright. All rights reserved.

Beyond clay: Towards an improved set of variables for predicting soil organic matter content

Abstract: Improved quantification of the factors controlling soil organic matter (SOM) stabilization at continental to global scales is needed to inform projections of the largest actively cycling terrestrial carbon pool on Earth, and its response to environmental change Biogeochemical models rely almost exclusively on clay content to modify rates of SOM turnover and fluxes of climate-active CO2 to the atmosphere Emerging conceptual understanding, however, suggests other soil physicochemical properties may predict SOM stabilization better than clay content We addressed this discrepancy by synthesizing data from over 5,500 soil profiles spanning continental scale environmental gradients Here, we demonstrate that other physicochemical parameters are much stronger predictors of SOM content, with clay content having relatively little explanatory power We show that exchangeable calcium strongly predicted SOM content in water-limited, alkaline soils, whereas with increasing moisture availability and acidity, iron- and aluminum-oxyhydroxides emerged as better predictors, demonstrating that the relative importance of SOM stabilization mechanisms scales with climate and acidity These results highlight the urgent need to modify biogeochemical models to better reflect the role of soil physicochemical properties in SOM cycling

Digging deeper: A holistic perspective of factors affecting soil organic carbon sequestration in agroecosystems.

Abstract: The global magnitude (Pg) of soil organic carbon (SOC) is 677 to 0.3-m, 993 to 0.5-m, and 1,505 to 1-m depth. Thus, ~55% of SOC to 1-m lies below 0.3-m depth. Soils of agroecosystems are depleted of their SOC stock and have a low use efficiency of inputs of agronomic yield. This review is a collation and synthesis of articles published in peer-reviewed journals. The rates of SOC sequestration are scaled up to the global level by linear extrapolation. Soil C sink capacity depends on depth, clay content and mineralogy, plant available water holding capacity, nutrient reserves, landscape position, and the antecedent SOC stock. Estimates of the historic depletion of SOC in world soils, 115-154 (average of 135) Pg C and equivalent to the technical potential or the maximum soil C sink capacity, need to be improved. A positive soil C budget is created by increasing the input of biomass-C to exceed the SOC losses by erosion and mineralization. The global hotspots of SOC sequestration, soils which are farther from C saturation, include eroded, degraded, desertified, and depleted soils. Ecosystems where SOC sequestration is feasible include 4,900 Mha of agricultural land including 332 Mha equipped for irrigation, 400 Mha of urban lands, and ~2,000 Mha of degraded lands. The rate of SOC sequestration (Mg C ha-1 year-1 ) is 0.25-1.0 in croplands, 0.10-0.175 in pastures, 0.5-1.0 in permanent crops and urban lands, 0.3-0.7 in salt-affected and chemically degraded soils, 0.2-0.5 in physically degraded and prone to water erosion, and 0.05-0.2 for those susceptible to wind erosion. Global technical potential of SOC sequestration is 1.45-3.44 Pg C/year (2.45 Pg C/year).

Decreasing soil microbial diversity is associated with decreasing microbial biomass under nitrogen addition

Abstract: While aboveground biodiversity has been widely studied, how microbial biodiversity responds to increasing nitrogen (N) deposition is still unclear. Here we conducted a meta-analysis to investigate the responses of soil microbial diversity and composition to N addition. Overall, we found N addition decreased both soil microbial diversity and the relative abundance of Actinobacteria and Nitrospirae, although the effect may vary among different ecosystems. The effect size on microbial Shannon index was positively correlated with the changes in soil microbial biomass under N addition. The initial soil conditions, the duration of treatment, the N addition rate and changes in soil organic carbon under N addition all affected the effect sizes of N addition on microbial Shannon index, while changes in soil pH played a minor role. Overall, our results suggest that the losses of microbial diversity with increasing N deposition rate would alter ecosystem functions and may have profound feedbacks to global climate change.

Land use driven change in soil pH affects microbial carbon cycling processes

Abstract: Soil microorganisms act as gatekeepers for soil-atmosphere carbon exchange by balancing the accumulation and release of soil organic matter However, poor understanding of the mechanisms responsible hinders the development of effective land management strategies to enhance soil carbon storage Here we empirically test the link between microbial ecophysiological traits and topsoil carbon content across geographically distributed soils and land use contrasts We discovered distinct pH controls on microbial mechanisms of carbon accumulation Land use intensification in low-pH soils that increased the pH above a threshold (~62) leads to carbon loss through increased decomposition, following alleviation of acid retardation of microbial growth However, loss of carbon with intensification in near-neutral pH soils was linked to decreased microbial biomass and reduced growth efficiency that was, in turn, related to trade-offs with stress alleviation and resource acquisition Thus, less-intensive management practices in near-neutral pH soils have more potential for carbon storage through increased microbial growth efficiency, whereas in acidic soils, microbial growth is a bigger constraint on decomposition rates

Effects of agricultural management on soil organic matter and carbon transformation - a review

Abstract: Soil organic carbon (SOC) is the most often reported attribute and is chosen as the most important indicator of soil quality and agricultural sustainability. In this review, we summarized how cultivation, crop rotation, residue and tillage management, fertilization and monoculture affect soil quality, soil organic matter (SOM) and carbon transformation. The results confirm that SOM is not only a source of carbon but also a sink for carbon sequestrati on. Cultivation and tillage can reduce soil SOC content and lead to soil deterioration. Tillage practices have a major effect on distribution of C and N, and the rates of organic matter decomposition and N mineralization. Proper adoption of crop rotation can increase or maintain the quantity and quality of soil organic matter, and improve soil chemical and physical properties. Adequate application of fertilizers combined with farmyard manure could increase soil nutrients, and SOC content. Manure or crop residue alone may not be adequate to maintain SOC levels. Crop types influence SOC and soil function in continuous monoculture systems. SOC can be best preserved by rotation with reduced tillage frequency and with additions of chemical fertilizers and manure. Knowledge and assessment of changes (positive or negative) in SOC status with time is still needed to evaluate the impact of different management practices.

Effects of biochar application in forest ecosystems on soil properties and greenhouse gas emissions: a review

Abstract: Forests play a critical role in terrestrial ecosystem carbon cycling and the mitigation of global climate change. Intensive forest management and global climate change have had negative impacts on the quality of forest soils via soil acidification, reduction of soil organic carbon content, deterioration of soil biological properties, and reduction of soil biodiversity. The role of biochar in improving soil properties and the mitigation of greenhouse gas (GHG) emissions has been extensively documented in agricultural soils, while the effect of biochar application on forest soils remains poorly understood. Here, we review and summarize the available literature on the effects of biochar on soil properties and GHG emissions in forest soils. This review focuses on (1) the effect of biochar application on soil physical, chemical, and microbial properties in forest ecosystems; (2) the effect of biochar application on soil GHG emissions in forest ecosystems; and (3) knowledge gaps concerning the effect of biochar application on biogeochemical and ecological processes in forest soils. Biochar application to forests generally increases soil porosity, soil moisture retention, and aggregate stability while reducing soil bulk density. In addition, it typically enhances soil chemical properties including pH, organic carbon stock, cation exchange capacity, and the concentration of available phosphorous and potassium. Further, biochar application alters microbial community structure in forest soils, while the increase of soil microbial biomass is only a short-term effect of biochar application. Biochar effects on GHG emissions have been shown to be variable as reflected in significantly decreasing soil N2O emissions, increasing soil CH4 uptake, and complex (negative, positive, or negligible) changes of soil CO2 emissions. Moreover, all of the aforementioned effects are biochar-, soil-, and plant-specific. The application of biochars to forest soils generally results in the improvement of soil physical, chemical, and microbial properties while also mitigating soil GHG emissions. Therefore, we propose that the application of biochar in forest soils has considerable advantages, and this is especially true for plantation soils with low fertility.

Effect of Different Levels of Humic Acids on the Nutrient Content, Plant Growth, and Soil Properties under Conditions of Salinity

Abstract: In this study, the effects were investigated of salinity, foliar and soil applications of humic substances on the growth and mineral nutrients uptake of Corn (Hagein, Fardy10), and the comparison was carried out of the soil and foliar applications of humic acid treatments at different NaCl levels. Soil organic contents are one of the most important parts that they directly affect the soil fertility and textures with their complex and heterogenous structures although they occupy a minor percentage of the soil weight. Humic acids are an important soil component that can improve nutrient availability and impact on other important chemical, biological, and physical properties of soils. The effects of foliar and soil applications of humic substances on the plant growth and some nutrient elements uptake of Corn (Hagein, Fardy10) grown at various salt concentrations were examined. Sodium chloride was added to the soil to obtain 20 and 60mM saline conditions. Solid humus was applied to the soil one month before planting and liquid humic acids were sprayed on the leaves twice on 20 th and 40 th day after seedling emergence. The application doses of solid humus were 0, 2 and 4 g/kg and those of liquid humic acids were 0, 0.1 and 0.2%. Salinity negatively affected the growth of corn; it also decreased the dry weight and the uptake of nutrient elements except for Na and Mn. Soil ap - plication of humus increased the N uptake of corn while foliar application of humic acids increased the uptake of P, K, Mg,Na,Cu and Zn. Although the effect of interaction between salt and soil humus application was found statistically significant, the interaction effect between salt and foliar humic acids treatment was not found significant. Under salt stress, the first doses of both soil and foliar application of humic substances increased the uptake of nutrients. Keyword: humic acids; nutrient content; plant growth; salinity, soil properties

Biodegradable Plastic Mulch Films: Impacts on Soil Microbial Communities and Ecosystem Functions.

Abstract: Agricultural plastic mulch films are widely used in specialty crop production systems because of their agronomic benefits. Biodegradable plastic mulches (BDMs) offer an environmentally sustainable alternative to conventional polyethylene (PE) mulch. Unlike PE films, which need to be removed after use, BDMs are tilled into soil where they are expected to biodegrade. However, there remains considerable uncertainty about long-term impacts of BDM incorporation on soil ecosystems. BDMs potentially influence soil microbial communities in two ways: first, as a surface barrier prior to soil incorporation, indirectly affecting soil microclimate and atmosphere (similar to PE films) and second, after soil incorporation, as a direct input of physical fragments, which add carbon, microorganisms, additives, and adherent chemicals. This review summarizes the current literature on impacts of plastic mulches on soil biological and biogeochemical processes, with a special emphasis on BDMs. The combined findings indicated that when used as a surface barrier, plastic mulches altered soil microbial community composition and functioning via microclimate modification, though the nature of these alterations varied between studies. In addition, BDM incorporation into soil can result in enhanced microbial activity and enrichment of fungal taxa. This suggests that despite the fact that total carbon input from BDMs is minuscule, a stimulatory effect on microbial activity may ultimately affect soil organic matter dynamics. To address the current knowledge gaps, long term studies and a better understanding of impacts of BDMs on nutrient biogeochemistry are needed. These are critical to evaluating BDMs as they relate to soil health and agroecosystem sustainability.

Nitrogen limitation of decomposition and decay: How can it occur?

Abstract: The availability of nitrogen (N) is a critical control on the cycling and storage of soil carbon (C). Yet, there are conflicting conceptual models to explain how N availability influences the decomposition of organic matter by soil microbial communities. Several lines of evidence suggest that N availability limits decomposition; the earliest stages of leaf litter decay are associated with a net import of N from the soil environment, and both observations and models show that high N organic matter decomposes more rapidly. In direct contrast to these findings, experimental additions of inorganic N to soils broadly show a suppression of microbial activity, which is inconsistent with N limitation of decomposition. Resolving this apparent contradiction is critical to representing nutrient dynamics in predictive ecosystem models under a multitude of global change factors that alter soil N availability. Here, we propose a new conceptual framework, the Carbon, Acidity, and Mineral Protection hypothesis, to understand the effects of N availability on soil C cycling and storage and explore the predictions of this framework with a mathematical model. Our model simulations demonstrate that N addition can have opposing effects on separate soil C pools (particulate and mineral-protected carbon) because they are differentially affected by microbial biomass growth. Moreover, changes in N availability are frequently linked to shifts in soil pH or osmotic stress, which can independently affect microbial biomass dynamics and mask N stimulation of microbial activity. Thus, the net effect of N addition on soil C is dependent upon interactions among microbial physiology, soil mineralogy, and soil acidity. We believe that our synthesis provides a broadly applicable conceptual framework to understand and predict the effect of changes in soil N availability on ecosystem C cycling under global change.

Soil degradation: a problem threatening the sustainable development of agriculture in Northeast China

Abstract: Soil degradation that results from erosion, losses of organic matter and nutrients, or soil compaction are of great concern in every agricultural region of the world. The control of soil erosion and loss of organic matter has been proposed as critical to agricultural and environmental sustainability of Northeast China. This region is bread bas ket of China where the fertile and productive soils, Mollisols (also called Black soils), are primarily distributed. In this paper, we introduce the importance of Northeast China’s grain production to China, and describe the changes of sown acreage and grain production in past decades. This paper also summarizes the distribution, area and intensity of water erosion, changes in the number of gullies and gully density, thickness of top soil layer, soil organic matter content, bulk density, field water holding capacity, and infiltration rates; the number of soil microorganism and main enzyme activities from soil erosion in the region are also summarized. The moderately and severely water-eroded area accounted for 31.4% and 7.9% of the total, and annual declining rate is 1.8%. Erosion rate is 1.24–2.41 mm/year, and soil loss in 1°, 5° and 15° sloping farmlands is 3 t/ha/year, 78 t/ha/year and 220.5 t/ha/year, respectively. SOC content of uncultivated soil was nearly twice that of soil with a 50-year cultivation history, and the average annual declining rate of soil organic matter was 0.5%. Proper adoption of crop rotation can increase or maintain the quantity and quality of soil organic matter, and improve soil chemical and physical properties. Proposed strategies for erosion control, in particular how tillage management, terraces and strip cultivation, or soil amendments contribute to maintain or restore the productivity of severely eroded farmland, are discussed in the context of agricultural sustainability with an emphasis on the Chinese Mollisols.

High Microbial Diversity Promotes Soil Ecosystem Functioning.

Abstract: In soil, the link between microbial diversity and carbon transformations is challenged by the concept of functional redundancy. Here, we hypothesized that functional redundancy may decrease with increasing carbon source recalcitrance and that coupling of diversity with C cycling may change accordingly. We manipulated microbial diversity to examine how diversity decrease affects the decomposition of easily degradable (i.e., allochthonous plant residues) versus recalcitrant (i.e., autochthonous organic matter) C sources. We found that a decrease in microbial diversity (i) affected the decomposition of both autochthonous and allochthonous carbon sources, thereby reducing global CO2 emission by up to 40%, and (ii) shaped the source of CO2 emission toward preferential decomposition of most degradable C sources. Our results also revealed that the significance of the diversity effect increases with nutrient availability. Altogether, these findings show that C cycling in soil may be more vulnerable to microbial diversity changes than expected from previous studies, particularly in ecosystems exposed to nutrient inputs. Thus, concern about the preservation of microbial diversity may be highly relevant in the current global-change context assumed to impact soil biodiversity and the pulse inputs of plant residues and rhizodeposits into the soil.IMPORTANCE With hundreds of thousands of taxa per gram of soil, microbial diversity dominates soil biodiversity. While numerous studies have established that microbial communities respond rapidly to environmental changes, the relationship between microbial diversity and soil functioning remains controversial. Using a well-controlled laboratory approach, we provide empirical evidence that microbial diversity may be of high significance for organic matter decomposition, a major process on which rely many of the ecosystem services provided by the soil ecosystem. These new findings should be taken into account in future studies aimed at understanding and predicting the functional consequences of changes in microbial diversity on soil ecosystem services and carbon storage in soil.

Isolating organic carbon fractions with varying turnover rates in temperate agricultural soils : a comprehensive method comparison

Abstract: Fractionation of soil organic carbon (SOC) is crucial for mechanistic understanding and modeling of soil organic matter decomposition and stabilization processes. It is often aimed at separating the bulk SOC into fractions with varying turnover rates, but a comprehensive comparison of methods to achieve this is lacking. In this study, a total of 20 different SOC fractionation methods were tested by participating laboratories for their suitability to isolate fractions with varying turnover rates, using agricultural soils from three experimental sites with vegetation change from C3 to C4 22–36 years ago. Enrichment of C4-derived carbon was traced and used as a proxy for turnover rates in the fractions. Methods that apply a combination of physical (density, size) and chemical (oxidation, extraction) fractionation were identified as most effective in separating SOC into fractions with distinct turnover rates. Coarse light SOC separated by density fractionation was the most C4-carbon enriched fraction, while oxidation-resistant SOC left after extraction with NaOCl was the least C4-carbon enriched fraction. Surprisingly, even after 36 years of C4 crop cultivation in a temperate climate, no method was able to isolate a fraction with more than 76% turnover, which challenges the link to the most active plant-derived carbon pools in models. Particles with density >2.8 g cm−3 showed similar C4-carbon enrichment as oxidation-resistant SOC, highlighting the importance of sesquioxides for SOC stabilization. The importance of clay and silt-sized particles (

Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing.

Abstract: Rapidly thawing permafrost harbors ∼30 to 50% of global soil carbon, and the fate of this carbon remains unknown. Microorganisms will play a central role in its fate, and their viruses could modulate that impact via induced mortality and metabolic controls. Because of the challenges of recovering viruses from soils, little is known about soil viruses or their role(s) in microbial biogeochemical cycling. Here, we describe 53 viral populations (viral operational taxonomic units [vOTUs]) recovered from seven quantitatively derived (i.e., not multiple-displacement-amplified) viral-particle metagenomes (viromes) along a permafrost thaw gradient at the Stordalen Mire field site in northern Sweden. Only 15% of these vOTUs had genetic similarity to publicly available viruses in the RefSeq database, and ∼30% of the genes could be annotated, supporting the concept of soils as reservoirs of substantial undescribed viral genetic diversity. The vOTUs exhibited distinct ecology, with different distributions along the thaw gradient habitats, and a shift from soil-virus-like assemblages in the dry palsas to aquatic-virus-like assemblages in the inundated fen. Seventeen vOTUs were linked to microbial hosts (in silico), implicating viruses in infecting abundant microbial lineages from Acidobacteria, Verrucomicrobia, and Deltaproteobacteria, including those encoding key biogeochemical functions such as organic matter degradation. Thirty auxiliary metabolic genes (AMGs) were identified and suggested virus-mediated modulation of central carbon metabolism, soil organic matter degradation, polysaccharide binding, and regulation of sporulation. Together, these findings suggest that these soil viruses have distinct ecology, impact host-mediated biogeochemistry, and likely impact ecosystem function in the rapidly changing Arctic. IMPORTANCE This work is part of a 10-year project to examine thawing permafrost peatlands and is the first virome-particle-based approach to characterize viruses in these systems. This method yielded >2-fold-more viral populations (vOTUs) per gigabase of metagenome than vOTUs derived from bulk-soil metagenomes from the same site (J. B. Emerson, S. Roux, J. R. Brum, B. Bolduc, et al., Nat Microbiol 3:870-880, 2018, https://doi.org/10.1038/s41564-018-0190-y). We compared the ecology of the recovered vOTUs along a permafrost thaw gradient and found (i) habitat specificity, (ii) a shift in viral community identity from soil-like to aquatic-like viruses, (iii) infection of dominant microbial hosts, and (iv) carriage of host metabolic genes. These vOTUs can impact ecosystem carbon processing via top-down (inferred from lysing dominant microbial hosts) and bottom-up (inferred from carriage of auxiliary metabolic genes) controls. This work serves as a foundation which future studies can build upon to increase our understanding of the soil virosphere and how viruses affect soil ecosystem services.

A global map of mangrove forest soil carbon at 30 m spatial resolution

Abstract: With the growing recognition that effective action on climate change will require a combination of emissions reductions and carbon sequestration, protecting, enhancing and restoring natural carbon sinks have become political priorities. Mangrove forests are considered some of the most carbon-dense ecosystems in the world with most of the carbon stored in the soil. In order for mangrove forests to be included in climate mitigation efforts, knowledge of the spatial distribution of mangrove soil carbon stocks are critical. Current global estimates do not capture enough of the finer scale variability that would be required to inform local decisions on siting protection and restoration projects. To close this knowledge gap, we have compiled a large georeferenced database of mangrove soil carbon measurements and developed a novel machine-learning based statistical model of the distribution of carbon density using spatially comprehensive data at a 30 m resolution. This model, which included a prior estimate of soil carbon from the global SoilGrids 250 m model, was able to capture 63% of the vertical and horizontal variability in soil organic carbon density (RMSE of 10.9 kg m−3). Of the local variables, total suspended sediment load and Landsat imagery were the most important variable explaining soil carbon density. Projecting this model across the global mangrove forest distribution for the year 2000 yielded an estimate of 6.4 Pg C for the top meter of soil with an 86–729 Mg C ha−1 range across all pixels. By utilizing remotely-sensed mangrove forest cover change data, loss of soil carbon due to mangrove habitat loss between 2000 and 2015 was 30–122 Tg C with >75% of this loss attributable to Indonesia, Malaysia and Myanmar. The resulting map products from this work are intended to serve nations seeking to include mangrove habitats in payment-for- ecosystem services projects and in designing effective mangrove conservation strategies.

A keystone microbial enzyme for nitrogen control of soil carbon storage.

Abstract: Agricultural and industrial activities have increased atmospheric nitrogen (N) deposition to ecosystems worldwide. N deposition can stimulate plant growth and soil carbon (C) input, enhancing soil C storage. Changes in microbial decomposition could also influence soil C storage, yet this influence has been difficult to discern, partly because of the variable effects of added N on the microbial enzymes involved. We show, using meta-analysis, that added N reduced the activity of lignin-modifying enzymes (LMEs), and that this N-induced enzyme suppression was associated with increases in soil C. In contrast, N-induced changes in cellulase activity were unrelated to changes in soil C. Moreover, the effects of added soil N on LME activity accounted for more of the variation in responses of soil C than a wide range of other environmental and experimental factors. Our results suggest that, through responses of a single enzyme system to added N, soil microorganisms drive long-term changes in soil C accumulation. Incorporating this microbial influence on ecosystem biogeochemistry into Earth system models could improve predictions of ecosystem C dynamics.

Response and interaction of Bradyrhizobium japonicum and arbuscular mycorrhizal fungi in the soybean rhizosphere

Abstract: Regulatory response and interaction of Bradyrhizobium and arbuscular mycorrhizal fungi (AMF) play a vital role in rhizospheric soil processes and productivity of soybean (Glycine max L.). Nitrogen (N) and phosphorus (P) are essential nutrients for plant growth and productivity, the synergistic interaction(s) of AMF and Bradyrhizobium along with rhizospheric beneficial microorganisms stimulate soybean growth and development through enhanced mineral nutrient acquisition (N and P) and improved rhizosphere environment. Such interactions are crucial, especially under low-input eco-friendly agricultural cropping systems, which rely on biological processes rather than agrochemicals to maintain soil quality, sustainability, and productivity. Furthermore, enhancement of N-fixation by root nodules along with AMF-mediated synergism improves plant P nutrition and uptake, and proliferation of phosphate-solubilizing fungi. However, the genetic and/or allelic diversity among native strains, their genes/enzymes and many environmental factors (e.g., soil organic matter, fertilizers, light, temperature, soil moisture, and biotic interactors) affect the interactions between AMF and Bradyrhizobium. New information is available regarding the genetic composition of elite soybean inoculant strains in maximizing symbiotic performance, N-fixing capabilities and depending on N and P status the host-mediated regulation of root architecture. Overall, for sustainable soybean production systems, a deeper understanding of the interaction effects of Bradyrhizobium and AMF co-inoculation are expected in the future, so that optimized combinations of microorganisms can be applied as effective soil inoculants for plant growth promotion and fitness. The objective of this review is to offer insights into the mechanistic interactions of AMF and Bradyrhizobium and rhizopheric soil health, and elucidate the role of environmental factors in regulating growth, development and sustainable soybean productivity.

Ecoenzymatic stoichiometry and microbial nutrient limitation in rhizosphere soil in the arid area of the northern Loess Plateau, China

Abstract: Arid ecosystems are characterized as having stressful conditions of low energy and nutrient availability for soil microorganisms and vegetation. The rhizosphere serves as the one of most active microorganism habitats, however, the general understanding of the ecoenzymatic stoichiometry (exoenzymes) and microbial nutrient acquisition in rhizosphere soil is limited. Here, we investigated the vegetation communities and determined the soil physicochemical properties, microbial biomass, and enzymatic activities in rhizosphere under different vegetation and soil types in the arid area of the northern Loess Plateau. Type Ⅱ standard major axis (SMA) regression analysis showed that the plants played a more important role than soil properties in determining ecoenzymatic stoichiometry. Linear regression analysis displayed a microbial stoichiometric homeostasis (community-level) in rhizosphere. The Threshold Elemental Ratio (TER) revealed that the microbial nutrient metabolisms of rhizosphere were co-limited by N and P in the A. ordosica and A. cristatum communities of loess, and A. cristatum communities of feldspathic sandstone weathered soil. Binding spatial ordination analysis (RDA and CCA) demonstrated that soil physical properties (e.g., soil moisture, silt and clay contents) have more contribution to ecoenzymatic stoichiometry than the other investigated soil parameters, whereas soil nutrients (e.g., total organic carbon, nitrogen, and phosphorus) predominantly controlled microbial nutrient ratios. Therefore, the ecoenzymatic stoichiometry in rhizosphere is greatly regulated by plants and soil physical properties. The microbial N and P are co-limited under Gramineae plant in loess and feldspathic sandstone weathered soil regions. Meanwhile, the microbial nutrient limitation is mainly affected by soil nutrient supply. These findings could be crucial for illuminating rhizosphere microbial metabolism and revealing the nutrient cycling of root-soil interface under arid and oligotrophic ecosystems.

Soil labile organic carbon fractions and soil organic carbon stocks as affected by long-term organic and mineral fertilization regimes in the North China Plain

Abstract: To improve C sequestration in soils and mitigate climate change, it is essential to understand how nutrient management strategies impact on soil organic carbon (SOC) stocks and labile fractions. This study was designed to explore changes in soil bulk density (BD), SOC concentrations, SOC stocks and soil labile organic C fractions (mineralizable C (Cmin), microbial biomass C (MBC), dissolved organic C (DOC), particulate organic C (POC), light fraction organic C (LFOC) and permanganate oxidizable C (KMnO 4 -C)) under 26-year fertilization regimes in a wheat-maize rotation system in the North China Plain. Soil from the following six treatments was analyzed: (1) Control with no amendment addition (CK); (2) Standard rate of mineral fertilizer treatment (SMF) reflecting local farmers' practice; (3) Standard rate of organic manure treatment (SMA) with total N input equal to SMF; (4) Half the standard rate of mineral fertilizer plus half the standard rate of organic manure treatment (1/2 SMF + 1/2 SMA); (5) Double standard rate of mineral fertilizer treatment (DMF); (6) Double standard rate of organic manure treatment (DMA). Results showed that all long-term fertilization regimes significantly decreased BD in topsoil compared to CK except for SMF, with treatments that included organic manure resulting in the lowest BDs. Treatments that included organic manure had significantly higher SOC concentrations and stocks than mineral or unfertilized treatments. The organic manure treatments also had higher concentrations of non-labile C but at the same time a higher proportion of labile C than the mineral or unfertilized treatments. This was confirmed by the carbon management index (CMI) which was significantly increased by organic manure addition. Control and mineral fertilized treatments had higher efficiencies of C retention (RE) from added inputs (crop residues only). Differences in Cmin, POC and KMnO 4 -C were affected by differences in MA-C, however, changes in rhizodeposition-C, stubble-C and root-C significantly affected DOC, MBC and LFOC. This study demonstrates that fertilization strategies that include organic manure can increase the pool of stable C in the surface soil layer, while at the same time increasing concentrations and proportions of labile C. Organic manure use can therefore contribute to improved nutrient cycling services and higher soil quality in the North China Plain.

The root of the matter: linking root traits and soil organic matter stabilization processes.

Abstract: Plant roots contribute substantially to the formation of stable soil organic matter (SOM), and there is evidence that species differ in their contribution to SOM stabilization. However, it remains unclear what specific root traits contribute to the three SOM stabilization mechanisms: recalcitrance against decomposition, occlusion in soil aggregates and interaction with soil minerals and metals. This is likely because research is highly fragmented and hampered by disciplinary barriers. By reviewing both plant functional ecology and soil science literature, we identified 18 different traits: architectural, morphological, physiological, symbiotic and chemical root characteristics, influencing the three SOM stabilization mechanisms. We found that traits increasing root recalcitrance promote short term stabilization by slowing decomposition, but that traits reducing recalcitrance contribute to long term stabilization by reaction of microbial products with mineral surfaces. Root length density, mycorrhizal association and rhizodeposition contribute to microaggregation. These and other traits, such as hemicellulose, soluble compounds, and high root branching index, favor macroaggregation. For stabilization by minerals and metals, those root traits promoting higher microbial activity: root nitrogen, hemicellulose and soluble compound concentrations are fundamental, while polyphenols, and litter Al and Mn also contribute to complexification and stabilization. Root depth distribution is the most important trait to control root C storage and stabilization in the subsoil; once roots have reached deeper soil layers, other traits, such as rhizodeposition and root chemistry, influence interaction with minerals and metals. Both mycorrhizal presence and root suberin promote SOC stabilization by means of all three mechanisms, indicating that these are important targets for continued work. Surprisingly, morphological traits commonly measured, namely specific root length and root diameter, poorly relate to stabilization mechanisms. Alternative traits such as chemical composition of the different root orders, root apex characteristics, quantity and quality of rhizodeposits as well as mycorrhizal fungal traits, should be further investigated. For future research, this review highlights the need to evaluate root decomposition and root-C stabilization concomitantly over the long-term, considering simultaneously root litter quality, estimated by root traits, the microbial products and properties of the soil matrix. The information accrued in this review can be used to evaluate the potential of plant species and cultivars to promote SOM stabilization, based on their root traits.

Root exudate metabolomes change under drought and show limited capacity for recovery

Abstract: Root exudates comprise a large variety of compounds released by plants into the rhizosphere, including low-molecular-weight primary metabolites (particularly saccharides, amino acids and organic acids) and secondary metabolites (phenolics, flavonoids and terpenoids). Changes in exudate composition could have impacts on the plant itself, on other plants, on soil properties (e.g. amount of soil organic matter), and on soil organisms. The effects of drought on the composition of root exudates, however, have been rarely studied. We used an ecometabolomics approach to identify the compounds in the exudates of Quercus ilex (holm oak) under an experimental drought gradient and subsequent recovery. Increasing drought stress strongly affected the composition of the exudate metabolome. Plant exudates under drought consisted mainly of secondary metabolites (71% of total metabolites) associated with plant responses to drought stress, whereas the metabolite composition under recovery shifted towards a dominance of primary metabolites (81% of total metabolites). These results strongly suggested that roots exude the most abundant root metabolites. The exudates were changed irreversibly by the lack of water under extreme drought conditions, and the plants could not recover.