M
Manjit Panigrahi
Researcher at Indian Veterinary Research Institute
Publications - 113
Citations - 623
Manjit Panigrahi is an academic researcher from Indian Veterinary Research Institute. The author has contributed to research in topics: Population & Biology. The author has an hindex of 8, co-authored 92 publications receiving 276 citations. Previous affiliations of Manjit Panigrahi include Indian Council of Agricultural Research.
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Journal ArticleDOI
Selection signatures in livestock genome: A review of concepts, approaches and applications
TL;DR: A comprehensive overview of the general concept, various methodologies, and bioinformatics tools currently available for the detection of selective sweeps and the results of recent selection signature studies carried out in various livestock species are given.
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Genomic scans for selection signatures revealed candidate genes for adaptation and production traits in a variety of cattle breeds.
K.A. Saravanan,Manjit Panigrahi,Harshit Kumar,Subhashree Parida,Bharat Bhushan,Gyanendra Kumar Gaur,Triveni Dutt,Bina Mishra,R. K. Singh +8 more
TL;DR: In this paper, the authors implemented three complementary approaches viz. iHS (integrated haplotype score), ROH (Runs of homozygosity), and FST, to detect selection signatures.
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Revelation of genomic breed composition in a crossbred cattle of India with the help of Bovine50K BeadChip.
Sheikh Firdous Ahmad,Manjit Panigrahi,Supriya Chhotaray,Dhan Pal,Subhashree Parida,Bharat Bhushan,Gyanendra Kumar Gaur,Bina Mishra,R. K. Singh +8 more
TL;DR: The Vrindavani composite population in India was found to possess an average ancestry of 42.16, 22.39, 24.78 and 10.67% inheritance levels from Holstein Friesian, Jersey, Hariana and Brown Swiss cattle breeds, respectively.
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Comparative analysis of five different methods to design a breed-specific SNP panel for cattle
Harshit Kumar,Manjit Panigrahi,Supriya Chhotaray,Subhashree Parida,Anuj Chauhan,Bharat Bhushan,Gyanendra Kumar Gaur,Bina Mishra,R. K. Singh +8 more
TL;DR: Methods for reducing the number of SNPs to develop a breed-specific panel using MAF-LD based method, recently developed by us, which showed appropriate clustering in comparison to other panels are described.
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Genome-wide estimation of inbreeding coefficient, effective population size and haplotype blocks in Vrindavani crossbred cattle strain of India
Supriya Chhotaray,Manjit Panigrahi,Dhan Pal,Sheikh Firdous Ahmad,Veerakyathappa Bhanuprakash,Harshit Kumar,Subhashree Parida,Bharat Bhushan,Gyanendra Kumar Gaur,Bina Mishra,R. K. Singh +10 more
TL;DR: It can be concluded that Vrindavani is an admixed cattle strain but have an unstable population structure in the current period.