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Danielle Miller
Researcher at Tel Aviv University
Publications - 11
Citations - 309
Danielle Miller is an academic researcher from Tel Aviv University. The author has contributed to research in topics: Mutation rate & Biology. The author has an hindex of 5, co-authored 8 publications receiving 175 citations.
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Journal ArticleDOI
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel.
Danielle Miller,Michael A. Martin,Noam Harel,Omer Tirosh,Talia Kustin,Moran Meir,Nadav Sorek,Shiraz Gefen-Halevi,Sharon Amit,Olesya Vorontsov,Avraham Shaag,Dana G. Wolf,Avi Peretz,Yonat Shemer-Avni,Diana Roif-Kaminsky,Naama M. Kopelman,Amit Huppert,Amit Huppert,Katia Koelle,Adi Stern +19 more
TL;DR: This work sequences 212 SARS-CoV-2 sequences and uses them to perform a comprehensive analysis to trace the origins and spread of the virus and finds that travelers returning from the United States of America significantly contributed to viral spread in Israel.
Posted ContentDOI
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel
Danielle Miller,Michael A. Martin,Noam Harel,Talia Kustin,Omer Tirosh,Moran Meir,Nadav Sorek,Shiraz Gefen-Halevi,Sharon Amit,Olesya Vorontsov,Dana G. Wolf,Avi Peretz,Yonat Shemer-Avni,Diana Roif-Kaminsky,Naama M. Kopelman,Amit Huppert,Amit Huppert,Katia Koelle,Adi Stern +18 more
TL;DR: The findings underscore the ability of this virus to efficiently transmit between and within countries, as well as demonstrate the effectiveness of social distancing measures for reducing its spread.
Journal ArticleDOI
Drivers of adaptive evolution during chronic SARS-CoV-2 infections
Sheri Harari,Maayan Tahor,Natalie Rutsinsky,Suzy E Meijer,Danielle Miller,Oryan Henig,Ora Halutz,Katia Levytskyi,Ronen Ben-Ami,Amos Adler,Yael Paran,Adi Stern +11 more
TL;DR: In this paper , the authors search for drivers of VOC-like emergence by consolidating sequencing results from a set of 27 chronic infections and find evidence for dynamic polymorphic viral populations in most patients, suggesting that compromised immune system selects for antibody evasion in particular niches in a patient's body.
Journal ArticleDOI
Competition between social cheater viruses is driven by mechanistically different cheating strategies
TL;DR: This work observed the parallel emergence of two independent cheater mutants of MS2 phage, and inferred that while a single cheater is expected to reach an equilibrium with the wild type, cheater demise arises from antagonistic interactions between coinfecting cheaters.
Journal ArticleDOI
Inferring population genetics parameters of evolving viruses using time-series data.
TL;DR: This work thoroughly explores the performance of FITS on simulated data and highlights its ability to infer the fitness/mutation rate/population size and shows that FITS can infer meaningful information even when the input parameters are inexact.