Background on genetic algorithms, LISP, and genetic programming hierarchical problem-solving introduction to automatically-defined functions - the two-boxes problem problems that straddle the breakeven point for computational effort Boolean parity functions determining the architecture of the program the lawnmower problem the bumblebee problem the increasing benefits of ADFs as problems are scaled up finding an impulse response function artificial ant on the San Mateo trail obstacle-avoiding robot the minesweeper problem automatic discovery of detectors for letter recognition flushes and four-of-a-kinds in a pinochle deck introduction to biochemistry and molecular biology prediction of transmembrane domains in proteins prediction of omega loops in proteins lookahead version of the transmembrane problem evolutionary selection of the architecture of the program evolution of primitives and sufficiency evolutionary selection of terminals evolution of closure simultaneous evolution of architecture, primitive functions, terminals, sufficiency, and closure the role of representation and the lens effect Appendices: list of special symbols list of special functions list of type fonts default parameters computer implementation annotated bibliography of genetic programming electronic mailing list and public repository

Genetic Programming: On the Programming of Computers by Means of Natural Selection

1 Graphical modeling using L-systems.- 1.1 Rewriting systems.- 1.2 DOL-systems.- 1.3 Turtle interpretation of strings.- 1.4 Synthesis of DOL-systems.- 1.4.1 Edge rewriting.- 1.4.2 Node rewriting.- 1.4.3 Relationship between edge and node rewriting.- 1.5 Modeling in three dimensions.- 1.6 Branching structures.- 1.6.1 Axial trees.- 1.6.2 Tree OL-systems.- 1.6.3 Bracketed OL-systems.- 1.7 Stochastic L-systems.- 1.8 Context-sensitive L-systems.- 1.9 Growth functions.- 1.10 Parametric L-systems.- 1.10.1 Parametric OL-systems.- 1.10.2 Parametric 2L-systems.- 1.10.3 Turtle interpretation of parametric words.- 2 Modeling of trees.- 3 Developmental models of herbaceous plants.- 3.1 Levels of model specification.- 3.1.1 Partial L-systems.- 3.1.2 Control mechanisms in plants.- 3.1.3 Complete models.- 3.2 Branching patterns.- 3.3 Models of inflorescences.- 3.3.1 Monopodial inflorescences.- 3.3.2 Sympodial inflorescences.- 3.3.3 Polypodial inflorescences.- 3.3.4 Modified racemes.- 4 Phyllotaxis.- 4.1 The planar model.- 4.2 The cylindrical model.- 5 Models of plant organs.- 5.1 Predefined surfaces.- 5.2 Developmental surface models.- 5.3 Models of compound leaves.- 6 Animation of plant development.- 6.1 Timed DOL-systems.- 6.2 Selection of growth functions.- 6.2.1 Development of nonbranching filaments.- 6.2.2 Development of branching structures.- 7 Modeling of cellular layers.- 7.1 Map L-systems.- 7.2 Graphical interpretation of maps.- 7.3 Microsorium linguaeforme.- 7.4 Dryopteris thelypteris.- 7.5 Modeling spherical cell layers.- 7.6 Modeling 3D cellular structures.- 8 Fractal properties of plants.- 8.1 Symmetry and self-similarity.- 8.2 Plant models and iterated function systems.- Epilogue.- Appendix A Software environment for plant modeling.- A.1 A virtual laboratory in botany.- A.2 List of laboratory programs.- Appendix B About the figures.- Turtle interpretation of symbols.

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The Algorithmic Beauty of Plants

The theory of formal languages is the oldest and most fundamental area of theoretical computer science. It has served as a basis of formal modeling from the early stages of programming languages to the recent beginnings of DNA computing. This first handbook of formal languages gives a comprehensive up-to-date coverage of all important aspects and subareas of the field. Best specialists of various subareas, altogether 50 in number, are among the authors. The maturity of the field makes it possible to include a historical perspective in many presentations. The individual chapters can be studied independently, both as a text and as a source of reference. The Handbook is an invaluable aid for advanced students and specialists in theoretical computer science and related areas in mathematics, linguistics, and biology.

Handbook of Formal Languages

CGA shape, a novel shape grammar for the procedural modeling of CG architecture, produces building shells with high visual quality and geometric detail. It produces extensive architectural models for computer games and movies, at low cost. Context sensitive shape rules allow the user to specify interactions between the entities of the hierarchical shape descriptions. Selected examples demonstrate solutions to previously unsolved modeling problems, especially to consistent mass modeling with volumetric shapes of arbitrary orientation. CGA shape is shown to efficiently generate massive urban models with unprecedented level of detail, with the virtual rebuilding of the archaeological site of Pompeii as a case in point.

/pdf/procedural-modeling-of-buildings-3f2rlptuug.pdf

Procedural modeling of buildings

Continuous and Discrete Mathematical Models of Tumor-induced Angiogenesis

The examples of trees presented in the previous chapter introduce L- systems as a plant modeling tool. They also illustrate one of the most striking features of the generative approach to modeling, called data base amplification [136]. This term refers to the generation of complex- looking objects from very concise descriptions—in our case, L-systems comprised of small numbers of productions. Yet in spite of the small size, the specification of L-systems is not a trivial task.

Aristid Lindenmayer

Papers

The Algorithmic Beauty of Plants

Developmental models of herbaceous plants

Developmental Models of Multicellular Organisms: A Computer Graphics Perspective.

An Annotated Bibliography of Plant Modeling and Growth Simulation.