Interactions between organisms are a major determinant of the distribution and abundance of species. Ecology textbooks (e.g., Ricklefs 1984, Krebs 1985, Begon et al. 1990) summarise these important interactions as intra- and interspecific competition for abiotic and biotic resources, predation, parasitism and mutualism. Conspicuously lacking from the list of key processes in most text books is the role that many organisms play in the creation, modification and maintenance of habitats. These activities do not involve direct trophic interactions between species, but they are nevertheless important and common. The ecological literature is rich in examples of habitat modification by organisms, some of which have been extensively studied (e.g. Thayer 1979, Naiman et al. 1988).

Organisms as ecosystem engineers

https://www.owrb.ok.gov/quality/standards/pdf_standards/scenicrivers/Smith,%20Tilman%20and%20Nekola%201999.pdf

Eutrophication: impacts of excess nutrient inputs on freshwater, marine, and terrestrial ecosystems

Physical ecosystem engineers are organisms that directly or indirectly control the availability of resources to other organisms by causing physical state changes in biotic or abiotic materials. Physical ecosystem engineering by organisms is the physical modification, maintenance, or creation of habitats. Ecological effects of engineers on many other species occur in virtually all ecosystems because the physical state changes directly create nonfood resources such as living space, directly control abiotic resources, and indirectly modulate abiotic forces that, in turn, affect resource use by other organisms. Trophic interactions and resource competition do not constitute engineering. Engineering can have significant or trivial effects on other species, may involve the physical structure of an organism (like a tree) or structures made by an organism (like a beaver dam), and can, but does not invariably, have feedback effects on the engineer. We argue that engineering has both negative and positive effects on species richness and abundances at small scales, but the net effects are probably positive at larger scales encompassing engineered and nonengineered environments in ecological and evolutionary space and time. Models of the population dynamics of engineers suggest that the engineer/habitat equilibrium is often, but not always, locally stable and may show long-term cycles, with potential ramifications for community and ecosystem stability. As yet, data adequate to parameterize such a model do not exist for any engineer species. Because engineers control flows of energy and materials but do not have to participate in these flows, energy, mass, and stoichiometry do not appear to be useful in predicting which engineers will have big effects. Empirical observations suggest some potential generalizations about which species will be important engineers in which ecosystems. We point out some of the obvious, and not so obvious, ways in which engineering and trophic relations interact, and we call for greater research on physical ecosystem engineers, their impacts, and their interface with trophic relations.

Positive and negative effects of organisms as physical ecosystem engineers

Communities of microscopic plant life, or phytoplankton, dominate the Earth's aquatic ecosystems. This important new book by Colin Reynolds covers the adaptations, physiology and population dynamics of phytoplankton communities in lakes and rivers and oceans. It provides basic information on composition, morphology and physiology of the main phyletic groups represented in marine and freshwater systems and in addition reviews recent advances in community ecology, developing an appreciation of assembly processes, co-existence and competition, disturbance and diversity. Although focussed on one group of organisms, the book develops many concepts relevant to ecology in the broadest sense, and as such will appeal to graduate students and researchers in ecology, limnology and oceanography.

/pdf/the-ecology-of-phytoplankton-4ev70n3jsq.pdf

The Ecology of Phytoplankton

Humans now strongly influence almost every major aquatic ecosystem, and their activities have dramatically altered the fluxes of growth-limiting nutrients from the landscape to receiving waters. Unfortunately, these nutrient inputs have had profound negative effects upon the quality of surface waters worldwide. This review examines how eutrophication influences the biomass and species composition of algae in both freshwater and costal marine systems. An overview of recent advances in algae-related eutrophication research is presented. In freshwater systems, a summary is presented for lakes and reservoirs; streams and rivers; and wetlands. A brief summary is also presented for estuarine and coastal marine ecosystems. Eutrophication causes predictable increases in the biomass of algae in lakes and reservoirs; streams and rivers; wetlands; and coastal marine ecosystems. As in lakes, the response of suspended algae in large rivers to changes in nutrient loading may be hysteretic in some cases. The inhibitory effects of high concentrations of inorganic suspended solids on algal growth, which can be very evident in many reservoirs receiving high inputs of suspended soils, also potentially may occur in turbid rivers. Consistent and predictable eutrophication-caused increases in cyanobacterial dominance of phytoplankton have been reported worldwide for natural lakes, and similar trends are reported here both for phytoplankton in turbid reservoirs, and for suspended algae in a large river. A remarkable unity is evident in the global response of algal biomass to nitrogen and phosphorus availability in lakes and reservoirs; wetlands; streams and rivers; and coastal marine waters. The species composition of algal communities inhabiting the water column appears to respond similarly to nutrient loading, whether in lakes, reservoirs, or rivers. As is true of freshwater ecosystems, the recent literature suggests that coastal marine ecosystems will respond positively to nutrient loading control efforts. Our understanding of freshwater eutrophication and its effects on algal-related water quality is strong and is advancing rapidly. However, our understanding of the effects of eutrophication on estuarine and coastal marine ecosystems is much more limited, and this gap represents an important future research need. Although coastal systems can be hydrologically complex, the biomass of marine phytoplankton nonetheless appears to respond sensitively and predictably to changes in the external supplies of nitrogen and phosphorus. These responses suggest that efforts to manage nutrient inputs to the seas will result in significant improvements in coastal zone water quality. Additional new efforts should be made to develop models that quantitatively link ecosystem-level responses to nutrient loading in both freshwater and marine systems.

http://globalpnetwork.net/sites/default/files/Smith_2003_ESPR_eutrophication_review.pdf

Eutrophication of freshwater and coastal marine ecosystems a global problem

CLIMATE change, acid deposition and increasing solar ultraviolet irradiance1 have all combined to produce marked effects on lake waters and their ecosystems. Schindler et al.2 have shown that both climate warming and lake acidification have led to decreases in dissolved organic carbon concentrations in North American boreal lakes, resulting in a markedly increased exposure of the upper water column to solar ultraviolet radiation. Here we report ten years of observations of rainfall and lake chemistry at Swan Lake, Canada, that suggest that a fall in dissolved organic carbon concentrations can also occur by a different combination of climate change and acidification. In this boreal fresh water, a drought decreased lakewater levels, thus exposing to the atmosphere littoral sediments containing reduced sulphur from the previous atmospheric deposition of industrial sulphur dioxide into the lake and its catchment. This exposure caused a reoxidation of sediment sulphur, resulting in a remobilization of acid into the lake water, and thus a decrease in dissolved organic carbon concentrations sufficient to increase by three-fold the depth to which ultraviolet radiation can penetrate.

Increased UV-B penetration in a lake owing to drought-induced acidification

Effect of solar radiation on the formation of dissolved gaseous mercury in temperate lakes

Hydrogen peroxide (H 2 O 2 ) formation rates (nM h -1 ), photoproductive capacity (nM W -1 h -1 m -2 ), and H 2 O 2 formation efficiency ( Φ H 2 O 2 ) were measured on water samples exposed to a standard light source with a spectral composition similar to natural sunlight. Samples were from lakes and wetlands with varying levels of dissolved organic C (DOC), P, Fe, Ca, and pH. The relationship between H 2 O 2 formation rates and DOC was a power function (H 2 O 2 = 49.65 DOC 1.71 ; r 2 = 0.94), whereas the relationships between formation rates and DOC fluorescence (DOCFL) (H 2 O 2 = 118.32 + 33.06 DOCFL; r 2 = 0.98) and absorption coefficients at 310 (K a310 ) were linear (H 2 O 2 = 185.0 - 55.50 K a310 ; r 2 = 0.91). ΦH 2 O 2 was independent of DOC (r 2 = 0.12). Apparent quantum yields decreased with increasing wavelengths (300-400 nm). However, when apparent quantum yields were corrected with solar irradiance data, values were greatest in the UV-A (320-400 nm) region. The patterns observed were consistent for samples from temperate to arctic regions.

https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.4319/lo.1996.41.3.0540

Hydrogen peroxide formation: The interaction of ultraviolet radiation and dissolved organic carbon in lake waters along a 43–75°N gradient

Dunaliella tertiolecta in culture showed rates of net protein synthesis at night nearly equal to those during the day. In night protein synthesis carbon stored in carbohydrates and metabolite pools was used, whereas sulfate was assimilated from the medium as needed. As a result, whole cell C:S ratios varied systematically over the diel cycle, while the C:S ratio of isolated protein remained constant. In the stationary phase, sulfate incorporation into protein, unlike carbon incorporation, measured net protein synthesis rather than turnover.

Diel experiments with natural populations of marine and freshwater algae demonstrated that night protein synthesis is a general phenomenon in phytoplankton. For samples previously exposed to saturating light, day and night rates of protein synthesis were similar. The use of carbohydrate and metabolic pool carbon for night protein synthesis not only increased protein to the food web, but also altered ratios of protein, carbohydrate, and lipid to one another. The latter might result in changes in the nutritional value of phytoplankton to herbivores.

Night synthesis of protein by algae1

Measurements of carbon uptake by lake plankton at different levels of added phosphorus reveal some phytoplankton strategies that contribute to their survival in low-nutrient waters. Nutrient-deficient populations seem to temporarily reduce, rather than enhance, photosynthesis when phosphorus becomes available. This contradicts the basic hypothesis of the 14C bioassay used to determine “limiting” nutrients in natural waters. The reduction of carbon uptake rate continues until either the nutrient addition is taken up or no further storage is possible; at this time carbon upake may be enhanced. Concurrent measurements of phosphorus uptake showed no light response unless the plankton were exposed to significant phosphorus concentrations in the dark for several hours. Phytoplankton seem to be adapted for and dependent upon intermittent events exposing them to nutrient-enriched water. The ability of phosphate-depleted plankton to take up phosphate in excess of their growth requirements was used to develop an index for phosphate deficiency. To normalize for different biomass levels, the optimum photosynthetic rate was divided by the maximum uptake velocity giving a range for the C:P maximum uptake from 1.2 to 206 for plankton samples of varying phosphate deficiency.

https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.4319/lo.1981.26.6.1001

D. R. S. Lean

Papers

Increased UV-B penetration in a lake owing to drought-induced acidification

Effect of solar radiation on the formation of dissolved gaseous mercury in temperate lakes

Hydrogen peroxide formation: The interaction of ultraviolet radiation and dissolved organic carbon in lake waters along a 43–75°N gradient

Night synthesis of protein by algae1

Photosynthetic response of lake plankton to nutrient enrichment: A test for nutrient limitation