It is concluded from a review of the literature that plant cell culture itself generates genetic variability (somaclonal variation). Extensive examples are discussed of such variation in culture subclones and in regenerated plants (somaclones). A number of possible mechanisms for the origin of this phenomenon are considered. It is argued that this variation already is proving to be of significance for plant improvement. In particular the phenomenon may be employed to enhance the exchange required in sexual hybrids for the introgression of desirable alien genes into a crop species. It may also be used to generate variants of a commercial cultivar in high frequency without hybridizing to other genotypes.

Somaclonal variation — a novel source of variability from cell cultures for plant improvement

Publisher Summary This chapter discusses a search for physiological causes and ecological consequence in reference with the variation in growth rate between higher plants. When grown under optimum conditions, plant species from fertile, productive habitats tend to have inherently higher relative growth rates (RGR) than species from less favorable environments. Under these conditions, fast-growing species produce relatively more leaf area and less root mass, which greatly contributes to their larger carbon gain per unit plant weight. Fast-growing species also have higher respiration rates per unit organ weight, due to demands of a higher RGR and higher rate of nutrient uptake. Fast-growing species have a greater capacity to acquire nutrients, which is likely to be a consequence, rather than the cause, of their higher RGR. This chapter analyses variations in morphological, physiological, chemical, and allocation characteristics underlying variation in RGR, to arrive at an appraisal of its ecological significance. The lower specific leaf area (SLA) of slow-growing species is because of the relatively high concentration of cell-wall material and quantitative secondary compounds, which may protect against detrimental abiotic and biotic factors. This chapter concludes that it is likely that there are trade-offs between growth potential and performance under adverse conditions, however, the current ecophysiological information explaining variation in RGR is too limited to support this contention quantitatively.

/pdf/inherent-variation-in-growth-rate-between-higher-plants-a-26yywnhi7b.pdf

Inherent Variation in Growth Rate Between Higher Plants: A Search for Physiological Causes and Ecological Consequences

Polyamines and environmental challenges : recent development

Healthy plants host diverse but taxonomically structured communities of microorganisms, the plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes confer fitness advantages to the plant host, including growth promotion, nutrient uptake, stress tolerance and resistance to pathogens. In this Review, we explore how plant microbiome research has unravelled the complex network of genetic, biochemical, physical and metabolic interactions among the plant, the associated microbial communities and the environment. We also discuss how those interactions shape the assembly of plant-associated microbiomes and modulate their beneficial traits, such as nutrient acquisition and plant health, in addition to highlighting knowledge gaps and future directions. In this Review, Trivedi and colleagues explore the interactions between plants, their associated microbial communities and the environment, and also discuss how those interactions shape the assembly of plant-associated microbiomes and modulate their beneficial traits.

Plant–microbiome interactions: from community assembly to plant health

Wild Crop Relatives: Genomic and Breeding Resources

Bacterial communities associated with roots impact the health and nutrition of the host plant. The dynamics of these microbial assemblies over the plant life cycle are, however, not well understood. Here, we use dense temporal sampling of 1,510 samples from root spatial compartments to characterize the bacterial and archaeal components of the root-associated microbiota of field grown rice (Oryza sativa) over the course of 3 consecutive growing seasons, as well as 2 sites in diverse geographic regions. The root microbiota was found to be highly dynamic during the vegetative phase of plant growth and then stabilized compositionally for the remainder of the life cycle. Bacterial and archaeal taxa conserved between field sites were defined as predictive features of rice plant age by modeling using a random forest approach. The age-prediction models revealed that drought-stressed plants have developmentally immature microbiota compared to unstressed plants. Further, by using genotypes with varying developmental rates, we show that shifts in the microbiome are correlated with rates of developmental transitions rather than age alone, such that different microbiota compositions reflect juvenile and adult life stages. These results suggest a model for successional dynamics of the root-associated microbiota over the plant life cycle.

/pdf/compositional-shifts-in-root-associated-bacterial-and-41qsizjc52.pdf

Compositional shifts in root-associated bacterial and archaeal microbiota track the plant life cycle in field-grown rice.

In Vitro Tissue Culture of Selected Legumes and Plant Regeneration from Callus Cultures of Red Clover 1

Growing Lemna minor in agricultural wastewater and converting the duckweed biomass to ethanol.

This review presents an overview of the culture media and practices used in plant tissue culture and developmental biology. The compositions of the most commonly used basal media, especially Murashige and Skoog (MS) and modified MS (MMS), Gamborg’s B5 medium and B5 modifications, Woody Plant Medium (WPM), and Driver and Kuniyuki Woody plant medium (DKW) are discussed, along with typical basal medium manipulations to elicit and support various developmental responses. The most commonly used plant growth regulators and their applications to promote various developmental responses are examined, along with a presentation of the classical phytohormone developmental models for organogenesis and somatic embryogenesis. Elaborated developmental models for both organogenesis and somatic embryogenesis, with emphasis on discrete developmental steps, occasional need for multiple manipulations in culture to achieve a single developmental step, and identification of responsive tissue types in mixed cultures are explored. It is hoped that the information presented here will lead to a deeper understanding of basic tissue culture responses and will assist the reader in the decision-making process by identifying appropriate media and culture conditions for a particular species or application, or by providing a suitable starting point, should further customization be required.

Plant tissue culture media and practices: an overview

Chile pepper (Capsicum annuum L.) plants were regenerated from cotyledon explantsin vitro in four major stages: bud induction, bud enlargement, shoot elongation, and root development. Bud induction medium contained 0.5 mg/L (2.9μM) indole-3-acetic acid and 2 mg/L (8.9 μM) N6-benzyladenine. Bud enlargement occurred, and an occasional shoot appeared when medium with 2 mg/L (6μM) gibberellic acid, 2 mg/L (8.9 μM) N6-benzyladenine, and 5 mg/L (29.4 μM) silver nitrate was used. Most shoots elongated after placement on a third medium without plant growth regulators or on fresh plates of bud enlargement medium. Incubations were for 2, 2, and 4 weeks, respectively, at 28.5°C and continuous light. Treatment with silver nitrate was necessary for multiple shoot production and elongation to occur in the third culture stage and was most effective when present in the second-stage medium but not in the bud induction medium. Sixteen to 26% of the shoots rooted in medium with 1 mg/L (5.4 μM) 1-naphthaleneacetic acid after 1 month. Additional shoots transferred to a second rooting medium with 0.1 or 1.0 mg/L (0.54 or 5.4 μM) 1-naphthaleneacetic acid developed roots, increasing the overall rooting efficiency to 70–72%. Most rooted shoots grew well and produced viable seeds when grown in the greenhouse. Other cytokinins tested for plant regeneration were zeatin and thidiazuron. Zeatin induced few shoots and fewer well-developed plants. Thidiazuron induced multiple shoots 4 months after culture began, but many were small and did not elongate further. Phytagar tissue culture grade proved superior to other agars tested, increasing bud induction frequency from 0-33% to 80–93% and eliminating explant hyperhydricity.

Gregory C. Phillips

Papers

Compositional shifts in root-associated bacterial and archaeal microbiota track the plant life cycle in field-grown rice.

In Vitro Tissue Culture of Selected Legumes and Plant Regeneration from Callus Cultures of Red Clover 1

Growing Lemna minor in agricultural wastewater and converting the duckweed biomass to ethanol.

Plant tissue culture media and practices: an overview

Silver nitrate promotes shoot development and plant regeneration of chile pepper ( Capsicum annuum L.) via organogenesis