抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when evolution proceeds in a tree-like manner, analysis of the data may not be best served by using methods that enforce a tree structure but rather by a richer visualization of the data to evaluate its properties, at least as an essential first step. Thus, phylogenetic networks should be employed when reticulate events such as hybridization, horizontal gene transfer, recombination, or gene duplication and loss are believed to be involved, and, even in the absence of such events, phylogenetic networks have a useful role to play. This article reviews the terminology used for phylogenetic networks and covers both split networks and reticulate networks, how they are defined, and how they can be interpreted. Additionally, the article outlines the beginnings of a comprehensive statistical framework for applying split network methods. We show how split networks can represent confidence sets of trees and introduce a conservative statistical test for whether the conflicting signal in a network is treelike. Finally, this article describes a new program, SplitsTree4, an interactive and comprehensive tool for inferring different types of phylogenetic networks from sequences, distances, and trees.

https://bioinformatics.cs.vt.edu/~easychair/HusonBryant_MBE_2006.pdf

Application of Phylogenetic Networks in Evolutionary Studies

DBpedia is a community effort to extract structured information from Wikipedia and to make this information available on the Web. DBpedia allows you to ask sophisticated queries against datasets derived from Wikipedia and to link other datasets on the Web to Wikipedia data. We describe the extraction of the DBpedia datasets, and how the resulting information is published on the Web for human-andmachine-consumption. We describe some emerging applications from the DBpedia community and show how website authors can facilitate DBpedia content within their sites. Finally, we present the current status of interlinking DBpedia with other open datasets on the Web and outline how DBpedia could serve as a nucleus for an emerging Web of open data.

/pdf/dbpedia-a-nucleus-for-a-web-of-open-data-64wla3p0zr.pdf

DBpedia: a nucleus for a web of open data

This collaboratively edited knowledgebase provides a common source of data for Wikipedia, and everyone else.

https://dl.acm.org/doi/pdf/10.1145/2629489

Wikidata: a free collaborative knowledgebase

Data integration is the problem of combining data residing at different sources, and providing the user with a unified view of these data. The problem of designing data integration systems is important in current real world applications, and is characterized by a number of issues that are interesting from a theoretical point of view. This document presents on overview of the material to be presented in a tutorial on data integration. The tutorial is focused on some of the theoretical issues that are relevant for data integration. Special attention will be devoted to the following aspects: modeling a data integration application, processing queries in data integration, dealing with inconsistent data sources, and reasoning on queries.

/pdf/data-integration-a-theoretical-perspective-58aesjvhuk.pdf

Data integration: a theoretical perspective

Proceedings of 3rd International Workshop on Database Programming Languages

Federated Approximations for Heterogeneous Databases

The perceptron and the hologram are two dissimilar devices which have been advanced as neurological models. It :is shown that there are other and perhaps more plausible models which have properties common to both of these devices. The performance of these intermediate models which are termed Associative Nets is described and analysed statistically. The main similarities and differences between perceptron theory and holography can also be demonstrated; it is possible to demonstrate formal links between the translation invariance in certain types of holography and group invariance in perception. theory. Some single proofs of certain theorems in the latter are also given and some other learning procedures are formulated.

It is shown that the important difference between these various models resides in the method used to accomplish a modification. If this modification is an analogue of a neurological change a~ a synaptic level, then it should be possible to qualify the relevance of those models by determining what types of synaptic change can take place in different parts of the nervous system. -Although the evidence is far from complete, it suggests that the neocortex is limited to having one type of synaptic change.

Finally, each model is discussed in respect of its neurological plausibility.

Models of learning and memory

Proceedings of 21st VLDB Conference

A simple dynamic allocation algorithm is described for queuing variable length messages in memory. The algorithm makes use of the ability of many operating system to increase and decrease available memory as required. Some results describing its efficiency are presented.

Peter Buneman

Papers

Proceedings of 3rd International Workshop on Database Programming Languages

Federated Approximations for Heterogeneous Databases

Models of learning and memory

Proceedings of 21st VLDB Conference

A Space Efficient Dynamic Allocation Algorithm for Queuing Messages