R
Ralf Westram
Researcher at Technische Universität München
Publications - 5
Citations - 8360
Ralf Westram is an academic researcher from Technische Universität München. The author has contributed to research in topics: Software & Sequence database. The author has an hindex of 5, co-authored 5 publications receiving 7945 citations.
Papers
More filters
Journal ArticleDOI
ARB: a software environment for sequence data
Wolfgang Ludwig,Oliver Strunk,Ralf Westram,Lothar Richter,Harald Meier,Yadhukumar,Arno Buchner,Tina Lai,Susanne Steppi,Gangolf Jobb,Wolfram Förster,Igor Brettske,Stefan Gerber,Anton W. Ginhart,Oliver Gross,Silke Grumann,Stefan Hermann,Ralf Jost,Andreas König,Thomas Liss,Ralph Lüßmann,Michael May,Björn Nonhoff,Boris Reichel,Robert Strehlow,Alexandros Stamatakis,Norbert Stuckmann,Alexander Vilbig,Michael Lenke,Thomas Ludwig,Arndt Bode,Karl-Heinz Schleifer +31 more
TL;DR: The ARB program package comprises a variety of directly interacting software tools for sequence database maintenance and analysis which are controlled by a common graphical user interface.
Book ChapterDOI
46. ARB: A Software Environment for Sequence Data
Ralf Westram,Kai Christian Bader,Elmar Prüsse,Yadhu Kumar,Harald Meier,Frank Oliver Glöckner,Frank Oliver Glöckner,Wolfgang Ludwig +7 more
Journal ArticleDOI
25 years of serving the community with ribosomal RNA gene reference databases and tools.
Frank Oliver Glöckner,Frank Oliver Glöckner,Pelin Yilmaz,Christian Quast,Jan Gerken,Alan Beccati,Andreea Ciuprina,Gerrit Bruns,Pablo Yarza,Jörg Peplies,Ralf Westram,Wolfgang Ludwig +11 more
TL;DR: SILVA is the only rDNA database project worldwide where special emphasis is given to the consistent naming of clades of uncultivated (environmental) sequences, where no validly described cultivated representatives are available.
Journal ArticleDOI
Graphical representation of ribosomal RNA probe accessibility data using ARB software package.
Yadhu Kumar,Ralf Westram,Sebastian Behrens,Bernhard M. Fuchs,Frank Oliver Glöckner,Frank Oliver Glöckner,Rudolf Amann,Harald Meier,Wolfgang Ludwig +8 more
TL;DR: The PROBE Design tools of the ARB software package take into consideration several criteria such as number, position and quality of diagnostic sequence differences while designing oligonucleotide probes to enable the user to easily examine further sequence associated criteria.
Journal ArticleDOI
Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package
TL;DR: RNA3D as discussed by the authors is a program to combine sequence alignment information with three-dimensional structure of rRNA, which is used extensively by the scientific community for phylogenetic analysis and molecular probe designing.