So far in this course we have dealt entirely with the evolution of characters that are controlled by simple Mendelian inheritance at a single locus. There are notes on the course website about gametic disequilibrium and how allele frequencies change at two loci simultaneously, but we didn’t discuss them. In every example we’ve considered we’ve imagined that we could understand something about evolution by examining the evolution of a single gene. That’s the domain of classical population genetics. For the next few weeks we’re going to be exploring a field that’s actually older than classical population genetics, although the approach we’ll be taking to it involves the use of population genetic machinery. If you know a little about the history of evolutionary biology, you may know that after the rediscovery of Mendel’s work in 1900 there was a heated debate between the “biometricians” (e.g., Galton and Pearson) and the “Mendelians” (e.g., de Vries, Correns, Bateson, and Morgan). Biometricians asserted that the really important variation in evolution didn’t follow Mendelian rules. Height, weight, skin color, and similar traits seemed to

Human biochemical genetics

Estimates of genetic and environmental variability in soybeans (Glycine max. L.) [Egypt].

Sclerotinia sclerotiorum (Lib.) de Bary is a necrotrophic fungal pathogen causing disease in a wide range of plants. This review summarizes current knowledge of mechanisms employed by the fungus to parasitize its host with emphasis on biology, physiology and molecular aspects of pathogenicity. In addition, current tools for research and strategies to combat S. sclerotiorum are discussed. Taxonomy: Sclerotinia sclerotiorum (Lib.) de Bary: kingdom Fungi, phylum Ascomycota, class Discomycetes, order Helotiales, family Sclerotiniaceae, genus Sclerotinia. Identification: Hyphae are hyaline, septate, branched and multinucleate. Mycelium may appear white to tan in culture and in planta. No asexual conidia are produced. Long-term survival is mediated through the sclerotium; a pigmented, multi-hyphal structure that can remain viable over long periods of time under unfavourable conditions for growth. Sclerotia can germinate to produce mycelia or apothecia depending on environmental conditions. Apothecia produce ascospores, which are the primary means of infection in most host plants. Host range: S. sclerotiorum is capable of colonizing over 400 plant species found worldwide. The majority of these species are dicotyledonous, although a number of agriculturally significant monocotyledonous plants are also hosts. Disease symptoms: Leaves usually have water-soaked lesions that expand rapidly and move down the petiole into the stem. Infected stems of some species will first develop dark lesions whereas the initial indication in other hosts is the appearance of water-soaked stem lesions. Lesions usually develop into necrotic tissues that subsequently develop patches of fluffy white mycelium, often with sclerotia, which is the most obvious sign of plants infected with S. sclerotiorum.

Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen.

Many scientists, if not all, feel that their particular plant virus should appear in any list of the most important plant viruses. However, to our knowledge, no such list exists. The aim of this review was to survey all plant virologists with an association with Molecular Plant Pathology and ask them to nominate which plant viruses they would place in a 'Top 10' based on scientific/economic importance. The survey generated more than 250 votes from the international community, and allowed the generation of a Top 10 plant virus list for Molecular Plant Pathology. The Top 10 list includes, in rank order, (1) Tobacco mosaic virus, (2) Tomato spotted wilt virus, (3) Tomato yellow leaf curl virus, (4) Cucumber mosaic virus, (5) Potato virus Y, (6) Cauliflower mosaic virus, (7) African cassava mosaic virus, (8) Plum pox virus, (9) Brome mosaic virus and (10) Potato virus X, with honourable mentions for viruses just missing out on the Top 10, including Citrus tristeza virus, Barley yellow dwarf virus, Potato leafroll virus and Tomato bushy stunt virus. This review article presents a short review on each virus of the Top 10 list and its importance, with the intent of initiating discussion and debate amongst the plant virology community, as well as laying down a benchmark, as it will be interesting to see in future years how perceptions change and which viruses enter and leave the Top 10.

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Top 10 plant viruses in molecular plant pathology

Principles of Plant Breeding

The relative efficiency of 7 aphid species as vectors of potato virus Yo (PVYo) was investigated. Winged aphids of one species were released in a net cage containing PVYo-infected potato plants as a virus source and healthy young potato plants as test plants. After 35 hours the glasshouse chamber was fumigated and the young plants tested for PVYo by ELISA at 10-days intervals.Myzus persicae andAcyrthosiphon pisum were the most effective vectors, infecting 26 and 25% of the test plants, respectively.Aphis fabae, Aphis nasturtii andRhopalosiphum padi infected only 1–7% test plants.Sitobion avenae andBrevicoryne brassicae did not transmit PVYo. Relative ‘efficiency factors’ are suggested from these and other results.

The relative efficiency of some aphid species as vectors of potato virus Yo (PVYo)

Forecasting Sclerotinia stem rot in spring sown oilseed rape

The use of logistic regression is proposed as a method of verifying and calibrating disease risk algorithms. The logistic regression model calculates the log of the odds of a binary outcome as a function of a linear combination of predictors. The resulting model assumes a multiplicative (relative) relationship between the different risk factors. Computer programs for performing logistic regression produce both estimates and standard errors, thus permitting the evaluation of the importance of different predictive variables. The use of receiver operating characteristic (ROC) curves is also proposed as a means of comparing different algorithms. An example is presented using data on Sclerotinia stem rot in oil seed rape, caused bySclerotinia sclerotiorum.

Calibration and verification of risk algorithms using logistic regression.

Mature-plant resistance of potato plants against potato virus YO (PVYO) was studied in field experiments in 1976–1979 in southern Sweden. At intervals of 7 days, from mid June until mid August, PVYO was mechanically inoculated to one well-developed upper leaf per stem of each plant. Each week, a new group of plants were inoculated. In 1976–1977, the natural spread of PVYO by aphids was studied in relation to three different stages of potato plant development. The results of mechanical inoculation demonstrated that mature-plant resistance increases during July in southern Sweden but there were great differences between developmental stages. Early planting with sprouted seed resulted in plants with a considerable mature-plant resistance in mid July when late developed potato plants still were very susceptible.

Mature-plant resistance of potato plants against potato virus Yo(PVYo)

Hot pepper is the most important worldwide grown and consumed spice and vegetable crop. Though hybrid breeding has been proposed for genetic improvement in the crop, but there is lack of information on heterosis in crosses among crop genotypes in Ethiopia. Twelve genotypes (nine Asian and three Ethiopian parents) of hot pepper were crossed in 2003 cropping season in a half-diallel fashion to fit Griffing’s fixed effect model analysis. An open field experiment was conducted in 2004/2005 to investigate heterosis for fourteen traits in 66 F1 hybrids grown together with their 12 selfed parents. Highly significant genotypic differences were observed for all the traits except for leaf area. Variance component due to specific combining ability (dominance) were larger than that due to general combining ability (additive) for each of the studied traits with few exceptions. Broad sense heritability (Hb2) for fruit traits were more than 60% and with wide gap from narrow sense heritability (hn2) for most of the important traits like number of fruit per plant (Hb2 = 88.3% and hn2 = 46.0%), days to maturity (Hb2 = 87.2% and hn2 = 23.1%) and dry fruit yield per plant (Hb2 = 72.6% and hn2 = 14.6%). Maximum heterosis over mid-parent and better-parent, and economic superiority of hybrid over standard check were recorded, respectively for dry fruit yield per plant (163.8, 161.8 and 92.1%), number of fruits per plant (104.4, 79.6 and 136.4%) and days to maturity (−29.8, −31.5 and −23.6%). These observations suggested a possibility of utilizing dominance genetic potentiality available in diverse genotypes of the crop by heterosis breeding for improving hot pepper to the extent of better economic return compared to the current commercial cultivar under production in the country. Low narrow sense versus very high broad sense heritability for days to maturity and dry fruit yield per plant could be a sign for achievability of earliness and high fruit yield using heterosis in hot pepper. The maximum heterobeltiosis were recorded either from F1s obtained from Ethiopian and Asian crosses or from within Asian crosses, suggesting the possibility of maximizing heterosis by considering genetically diverse parental genotypes. The manifestation of highest heterosis in hybrids from among Asian lines indicated existence of genetic diversity among Asian genotypes and the potentiality for improvement of hot pepper using genotypes from different regions of the world along with elite inbred lines from local cultivars.

Roland Sigvald

Papers

The relative efficiency of some aphid species as vectors of potato virus Yo (PVYo)

Forecasting Sclerotinia stem rot in spring sown oilseed rape

Calibration and verification of risk algorithms using logistic regression.

Mature-plant resistance of potato plants against potato virus Yo(PVYo)

Heterosis and heritability in crosses among Asian and Ethiopian parents of hot pepper genotypes