Sudip Kundu

TL;DR: The computations reveal that the rigidity of a given DNA sequence is controlled by its ability to form cross-strand bifurcated hydrogen bonds between the successive base pairs.

TL;DR: Analysis of CREs, associated with differentially expressed hormone biosynthesis related genes in rice leaf under Magnaporthe oryzae attack and drought stress, enabled us to obtain insights about cross-talk among hormone biosynthetic pathways at the transcriptional level and identified some master transcription regulators that co-ordinate different hormones biosynthesis pathways under stress.

TL;DR: The influence of native topology of monomeric and sequestration of oligomeric proteins into multimeric complexes in yeast, human, and mouse is assessed to find additional structural constraints that regulate protein half-life in the cell.

TL;DR: Overall, the results provide a comprehensive analysis on the evolutionary relationship of the three structural nif genes, nifK,nifD and nifH, respectively, in the context of codon usage bias, GC content relationship and amino acid composition of the encoded proteins and exploration of crucial statistical method for the analysis of positive data with non-constant variance to identify the shape factors ofcodon adaptation index.

TL;DR: Simulations under different enzymatic cost conditions revealed participation of peroxisomal glutathione-ascorbate cycle in photorespiratory H2O2 metabolism, and metabolic flexibility, involving photorespiration, chloroplastic triose phosphate and the dicarboxylate transporters of the chloroplast and mitochondrion for redox and ATP exchanges across the intracellular compartments.