A survey on deep learning in medical image analysis

One of the main challenges in feature learning using Deep Convolutional Neural Networks (DCNNs) for large-scale face recognition is the design of appropriate loss functions that can enhance the discriminative power. Centre loss penalises the distance between deep features and their corresponding class centres in the Euclidean space to achieve intra-class compactness. SphereFace assumes that the linear transformation matrix in the last fully connected layer can be used as a representation of the class centres in the angular space and therefore penalises the angles between deep features and their corresponding weights in a multiplicative way. Recently, a popular line of research is to incorporate margins in well-established loss functions in order to maximise face class separability. In this paper, we propose an Additive Angular Margin Loss (ArcFace) to obtain highly discriminative features for face recognition. The proposed ArcFace has a clear geometric interpretation due to its exact correspondence to geodesic distance on a hypersphere. We present arguably the most extensive experimental evaluation against all recent state-of-the-art face recognition methods on ten face recognition benchmarks which includes a new large-scale image database with trillions of pairs and a large-scale video dataset. We show that ArcFace consistently outperforms the state of the art and can be easily implemented with negligible computational overhead. To facilitate future research, the code has been made available.

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ArcFace: Additive Angular Margin Loss for Deep Face Recognition

“Unpaired Image-to-Image Translation using Cycle-Consistent Adversarial Networks”の学習報告

The objective of this paper is speaker recognition under noisy and unconstrained conditions. 
We make two key contributions. First, we introduce a very large-scale audio-visual speaker recognition dataset collected from open-source media. Using a fully automated pipeline, we curate VoxCeleb2 which contains over a million utterances from over 6,000 speakers. This is several times larger than any publicly available speaker recognition dataset. 
Second, we develop and compare Convolutional Neural Network (CNN) models and training strategies that can effectively recognise identities from voice under various conditions. The models trained on the VoxCeleb2 dataset surpass the performance of previous works on a benchmark dataset by a significant margin.

VoxCeleb2: Deep Speaker Recognition.

One of the main challenges in feature learning using Deep Convolutional Neural Networks (DCNNs) for large-scale face recognition is the design of appropriate loss functions that enhance discriminative power. Centre loss penalises the distance between the deep features and their corresponding class centres in the Euclidean space to achieve intra-class compactness. SphereFace assumes that the linear transformation matrix in the last fully connected layer can be used as a representation of the class centres in an angular space and penalises the angles between the deep features and their corresponding weights in a multiplicative way. Recently, a popular line of research is to incorporate margins in well-established loss functions in order to maximise face class separability. In this paper, we propose an Additive Angular Margin Loss (ArcFace) to obtain highly discriminative features for face recognition. The proposed ArcFace has a clear geometric interpretation due to the exact correspondence to the geodesic distance on the hypersphere. We present arguably the most extensive experimental evaluation of all the recent state-of-the-art face recognition methods on over 10 face recognition benchmarks including a new large-scale image database with trillion level of pairs and a large-scale video dataset. We show that ArcFace consistently outperforms the state-of-the-art and can be easily implemented with negligible computational overhead. We release all refined training data, training codes, pre-trained models and training logs, which will help reproduce the results in this paper.

When trained at a sufficient scale, self-supervised learning has exhibited a notable ability to solve a wide range of visual or language understanding tasks. In this paper, we investigate simple, yet effective approaches for adapting the pre-trained foundation models to the downstream task of interest, namely, open-vocabulary semantic segmentation. To this end, we make the following contributions: (i) we introduce Fusioner, with a lightweight, transformer-based fusion module, that pairs the frozen visual representation with language concept through a handful of image segmentation data. As a consequence, the model gains the capability of zero-shot transfer to segment novel categories; (ii) without loss of generality, we experiment on a broad range of self-supervised models that have been pre-trained with different schemes, e.g. visual-only models (MoCo v3, DINO), language-only models (BERT), visual-language model (CLIP), and show that, the proposed fusion approach is effective to any pair of visual and language models, even those pre-trained on a corpus of uni-modal data; (iii) we conduct thorough ablation studies to analyze the critical components in our proposed Fusioner, while evaluating on standard benchmarks, e.g. PASCAL-5i and COCO-20i , it surpasses existing state-of-the-art models by a large margin, despite only being trained on frozen visual and language features; (iv) to measure the model's robustness on learning visual-language correspondence, we further evaluate on synthetic dataset, named Mosaic-4, where images are constructed by mosaicking the samples from FSS-1000. Fusioner demonstrates superior performance over previous models.

Open-vocabulary Semantic Segmentation with Frozen Vision-Language Models

Feature tracking Cardiac Magnetic Resonance (CMR) has recently emerged as an area of interest for quantification of regional cardiac function from balanced, steady state free precession (SSFP) cine sequences. However, currently available techniques lack full automation, limiting reproducibility. We propose a fully automated technique whereby a CMR image sequence is first segmented with a deep, fully convolutional neural network (CNN) architecture, and quadratic basis splines are fitted simultaneously across all cardiac frames using least squares optimization. Experiments are performed using data from 42 patients with hypertrophic cardiomyopathy (HCM) and 21 healthy control subjects. In terms of segmentation, we compared state-of-the-art CNN frameworks, U-Net and dilated convolution architectures, with and without temporal context, using cross validation with three folds. Performance relative to expert manual segmentation was similar across all networks: pixel accuracy was ~97%, intersection-over-union (IoU) across all classes was ~87%, and IoU across foreground classes only was ~85%. Endocardial left ventricular circumferential strain calculated from the proposed pipeline was significantly different in control and disease subjects (-25.3% vs -29.1%, p = 0.006), in agreement with the current clinical literature.

Feature Tracking Cardiac Magnetic Resonance via Deep Learning and Spline Optimization

Pixelwise segmentation of the left ventricular (LV) myocardium and the four cardiac chambers in 2-D steady state free precession (SSFP) cine sequences is an essential preprocessing step for a wide range of analyses. Variability in contrast, appearance, orientation, and placement of the heart between patients, clinical views, scanners, and protocols makes fully automatic semantic segmentation a notoriously difficult problem. Here, we present ${\Omega}$-Net (Omega-Net): a novel convolutional neural network (CNN) architecture for simultaneous localization, transformation into a canonical orientation, and semantic segmentation. First, an initial segmentation is performed on the input image, second, the features learned during this initial segmentation are used to predict the parameters needed to transform the input image into a canonical orientation, and third, a final segmentation is performed on the transformed image. In this work, ${\Omega}$-Nets of varying depths were trained to detect five foreground classes in any of three clinical views (short axis, SA, four-chamber, 4C, two-chamber, 2C), without prior knowledge of the view being segmented. The architecture was trained on a cohort of patients with hypertrophic cardiomyopathy and healthy control subjects. Network performance as measured by weighted foreground intersection-over-union (IoU) was substantially improved in the best-performing ${\Omega}$- Net compared with U-Net segmentation without localization or orientation. In addition, {\Omega}-Net was retrained from scratch on the 2017 MICCAI ACDC dataset, and achieves state-of-the-art results on the LV and RV bloodpools, and performed slightly worse in segmentation of the LV myocardium. We conclude this architecture represents a substantive advancement over prior approaches, with implications for biomedical image segmentation more generally.

{\Omega}-Net (Omega-Net): Fully Automatic, Multi-View Cardiac MR Detection, Orientation, and Segmentation with Deep Neural Networks

Nearly all existing counting methods are designed for a specific object class. Our work, however, aims to create a counting model able to count any class of object. To achieve this goal, we formulate counting as a matching problem, enabling us to exploit the image self-similarity property that naturally exists in object counting problems. We make the following three contributions: first, a Generic Matching Network (GMN) architecture that can potentially count any object in a class-agnostic manner; second, by reformulating the counting problem as one of matching objects, we can take advantage of the abundance of video data labeled for tracking, which contains natural repetitions suitable for training a counting model. Such data enables us to train the GMN. Third, to customize the GMN to different user requirements, an adapter module is used to specialize the model with minimal effort, i.e. using a few labeled examples, and adapting only a small fraction of the trained parameters. This is a form of few-shot learning, which is practical for domains where labels are limited due to requiring expert knowledge (e.g. microbiology). We demonstrate the flexibility of our method on a diverse set of existing counting benchmarks: specifically cells, cars, and human crowds. The model achieves competitive performance on cell and crowd counting datasets, and surpasses the state-of-the-art on the car dataset using only three training images. When training on the entire dataset, the proposed method outperforms all previous methods by a large margin.

Class-Agnostic Counting

The objective of this paper is a model that is able to discover, track and segment multiple moving objects in a video. We make four contributions: First, we introduce an object-centric segmentation model with a depth-ordered layer representation. This is implemented using a variant of the transformer architecture that ingests optical flow, where each query vector specifies an object and its layer for the entire video. The model can effectively discover multiple moving objects and handle mutual occlusions; Second, we introduce a scalable pipeline for generating multi-object synthetic training data via layer compositions, that is used to train the proposed model, significantly reducing the requirements for labour-intensive annotations, and supporting Sim2Real generalisation; Third, we conduct thorough ablation studies, showing that the model is able to learn object permanence and temporal shape consistency, and is able to predict amodal segmentation masks; Fourth, we evaluate our model, trained only on synthetic data, on standard video segmentation benchmarks, DAVIS, MoCA, SegTrack, FBMS-59, and achieve state-of-the-art performance among existing methods that do not rely on any manual annotations. With test-time adaptation, we observe further performance boosts.

Weidi Xie

Papers

Open-vocabulary Semantic Segmentation with Frozen Vision-Language Models

Feature Tracking Cardiac Magnetic Resonance via Deep Learning and Spline Optimization

{\Omega}-Net (Omega-Net): Fully Automatic, Multi-View Cardiac MR Detection, Orientation, and Segmentation with Deep Neural Networks

Class-Agnostic Counting

Segmenting Moving Objects via an Object-Centric Layered Representation