http://amborella.net/2010PlantSystematics/DATA/3-24-APG%202003%20Bot%20J%20Linn%20Soc%20APGII.pdf

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II

. The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1) is a modeling framework for estimating fluxes of biogenic compounds between terrestrial ecosystems and the atmosphere using simple mechanistic algorithms to account for the major known processes controlling biogenic emissions. It is available as an offline code and has also been coupled into land surface and atmospheric chemistry models. MEGAN2.1 is an update from the previous versions including MEGAN2.0, which was described for isoprene emissions by Guenther et al. (2006) and MEGAN2.02, which was described for monoterpene and sesquiterpene emissions by Sakulyanontvittaya et al. (2008). Isoprene comprises about half of the total global biogenic volatile organic compound (BVOC) emission of 1 Pg (1000 Tg or 1015 g) estimated using MEGAN2.1. Methanol, ethanol, acetaldehyde, acetone, α-pinene, β-pinene, t-β-ocimene, limonene, ethene, and propene together contribute another 30% of the MEGAN2.1 estimated emission. An additional 20 compounds (mostly terpenoids) are associated with the MEGAN2.1 estimates of another 17% of the total emission with the remaining 3% distributed among >100 compounds. Emissions of 41 monoterpenes and 32 sesquiterpenes together comprise about 15% and 3%, respectively, of the estimated total global BVOC emission. Tropical trees cover about 18% of the global land surface and are estimated to be responsible for ~80% of terpenoid emissions and ~50% of other VOC emissions. Other trees cover about the same area but are estimated to contribute only about 10% of total emissions. The magnitude of the emissions estimated with MEGAN2.1 are within the range of estimates reported using other approaches and much of the differences between reported values can be attributed to land cover and meteorological driving variables. The offline version of MEGAN2.1 source code and driving variables is available from http://bai.acd.ucar.edu/MEGAN/ and the version integrated into the Community Land Model version 4 (CLM4) can be downloaded from http://www.cesm.ucar.edu/ .

/pdf/the-model-of-emissions-of-gases-and-aerosols-from-nature-4abxgaax5t.pdf

The model of emissions of gases and aerosols from nature version 2.1 (MEGAN2.1): An extended and updated framework for modeling biogenic emissions

The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1): an extended and updated framework for modeling biogenic emissions

As the largest class of natural products, terpenes have a variety of roles in mediating antagonistic and beneficial interactions among organisms. They defend many species of plants, animals and microorganisms against predators, pathogens and competitors, and they are involved in conveying messages to conspecifics and mutualists regarding the presence of food, mates and enemies. Despite the diversity of terpenes known, it is striking how phylogenetically distant organisms have come to use similar structures for common purposes. New natural roles undoubtedly remain to be discovered for this large class of compounds, given that such a small percentage of terpenes has been investigated so far.

The function of terpene natural products in the natural world.

Plants synthesize an amazing diversity of volatile organic compounds (VOCs) that facilitate interactions with their environment, from attracting pollinators and seed dispersers to protecting themselves from pathogens, parasites and herbivores. Recent progress in -omics technologies resulted in the isolation of genes encoding enzymes responsible for the biosynthesis of many volatiles and contributed to our understanding of regulatory mechanisms involved in VOC formation. In this review, we largely focus on the biosynthesis and regulation of plant volatiles, the involvement of floral volatiles in plant reproduction as well as their contribution to plant biodiversity and applications in agriculture via crop-pollinator interactions. In addition, metabolic engineering approaches for both the improvement of plant defense and pollinator attraction are discussed in light of methodological constraints and ecological complications that limit the transition of crops with modified volatile profiles from research laboratories to real-world implementation.

https://nph.onlinelibrary.wiley.com/doi/epdf/10.1111/nph.12145

Biosynthesis, function and metabolic engineering of plant volatile organic compounds.

A list of 1719 chemical compounds identified from headspace samples of floral scent is presented. The list has been compiled from some 270 published papers, including analyses of 991 species of flowering plants and a few gymnosperms, a sample including seed plants from 90 families and 38 orders. The compounds belong to seven major compound classes, of which the aliphatics, the benzenoids and phenylpropanoids, and, among the terpenes, the mono- and sesquiterpenes, occur in most orders of seeds plants. C5-branched compounds, irregular terpenes, nitrogen-containing compounds, and a class of miscellaneous cyclic compounds have been recorded in about two-thirds of the orders. Sulfur-containing compounds occur in a third of the orders, whereas diterpenes have been reported from three orders only. The most common single compounds in floral scent are the monoterpenes limonene, (E)-β-ocimene, myrcene, linalool, α- and β-pinene, and the benzenoids benzaldehyde, methyl 2-hydroxybenzoate (methyl salicylate), benzyl alcohol, and 2-phenyl ethanol, which occur in 54–71% of the families investigated so far. The sesquiterpene caryophyllene and the irregular terpene 6-methyl-5-hepten-2-one are also common and occur in more than 50% of the families. Orchidaceae are by far the best investigated family, followed by several families known to have many species with strongly scented flowers, such as Araceae, Arecaceae, Magnoliaceae, and Rosaceae. However, the majority of angiosperm families are still poorly investigated. Relationships between floral scent and pollination, chemistry, evolution, and phylogeny are briefly discussed. It is concluded that floral scent chemistry is of little use for phylogenetic estimates above the genus level, whereas the distribution and combinations of floral scent compounds at species and subspecific levels is a promising field of investigation for the understanding of adaptations and evolutionary processes in angiosperms.

/pdf/diversity-and-distribution-of-floral-scent-3kpxfsqrud.pdf

Diversity and Distribution of Floral Scent

Cladistic parsimony analyses, based on morphological data, have been undertaken with the purpose of identifying major monophyletic groups and phylogenetic interrelationships within the Primulales. Actinidia (Actinidiaceae, Ericales) and three genera from two families of the Ebenales (Diospyros of the Ebenaceae and Manilkara and Monotheca of the Sapotaceae) were used as outgroups in the analyses. The results indicate that the Primulaceae, Theophrastaceae, and Myrsinaceae (excluding Maesa) represent three major monophyletic groups. The Myrsinaceae were found to be paraphyletic, with the majority of taxa forming a monophyletic group but with the genus Maesa constituting the sister group of the Primulaceae. It is proposed that Maesa should be raised to the rank of family to obtain strictly monophyletic groups in the Primulales. The genera Aegiceras and Coris, for which family affinities have been controversial, are well nested within the families Myrsinaceae and Primulaceae, respectively. Key words: Primulale...

Phylogenetic interrelationships in the order Primulales, with special emphasis on the family circumscriptions

Evidence from morphology and molecular sequence data from three chloroplast genes, rbcL, ndhF, and atpB, have shown that the genus Maesa constitutes an evolutionary lineage separate from the other ...

Maesaceae, a new primuloid family in the order Ericales s.l.

A synoptical revision of the Theophrastaceae in Central America is presented. Three genera are recognized, viz. Clavija (5 spp.), Deherainia (2 spp.), and Jacquinia (11 spp.). Four taxa are described as new to science, viz. Clavija fusca (Panama), Jacquinia nitida (Nicaragua, Honduras, Guatemala), J. montana (Nicaragua), and Deherainia smaragdina ssp. occidentals (Mexico, Veracruz). Three new combinations are proposed, viz. Clavija mezii ssp. allenii, Jacquinia macrocarpa ssp. pungens, and J. m. ssp. panamensis. Variation in reproductive characters, indumentum, and foliar anatomy is briefly reviewed.

A synopsis of Central American Theophrastaceae

Morphological traits and sequences from two chloroplast genes, ndhF and trnL‐F (intron, 3′ exon, and spacer), have been used to investigate relationships in the Ericalean family Theophrastaceae A total evidence parsimony analysis shows that the herbaceous genus Samolus is sister to all other Theophrastaceae The latter are in turn divided into two major groups, one with Theophrasta, Neomezia, and Clavija and the other with Deherainia, Votschia, and Jacquinia The representatives of Jacquinia are found in two separate well‐supported clades, one consisting of the white‐flowered species and the other of the mostly orange‐red‐flowered species, together with J paludicola and J longifolia, two aberrant species with whitish yellow flowers Deherainia and Votschia group with the latter clade, which makes Jacquinia paraphyletic We propose that J paludicola and J longifolia, together with the orange‐red‐flowered Jacquinia, be recognized as a separate genus, Bonellia The sister taxa Theophrasta and Neomezia a

https://www.jstor.org/stable/10.1086/375317

Bertil Ståhl

Papers

Diversity and Distribution of Floral Scent

Phylogenetic interrelationships in the order Primulales, with special emphasis on the family circumscriptions

Maesaceae, a new primuloid family in the order Ericales s.l.

A synopsis of Central American Theophrastaceae

Phylogeny of Theophrastaceae (Ericales s. lat.)