Stochastic thermodynamics as reviewed here systematically provides a framework for extending the notions of classical thermodynamics such as work, heat and entropy production to the level of individual trajectories of well-defined non-equilibrium ensembles. It applies whenever a non-equilibrium process is still coupled to one (or several) heat bath(s) of constant temperature. Paradigmatic systems are single colloidal particles in time-dependent laser traps, polymers in external flow, enzymes and molecular motors in single molecule assays, small biochemical networks and thermoelectric devices involving single electron transport. For such systems, a first-law like energy balance can be identified along fluctuating trajectories. For a basic Markovian dynamics implemented either on the continuum level with Langevin equations or on a discrete set of states as a master equation, thermodynamic consistency imposes a local-detailed balance constraint on noise and rates, respectively. Various integral and detailed fluctuation theorems, which are derived here in a unifying approach from one master theorem, constrain the probability distributions for work, heat and entropy production depending on the nature of the system and the choice of non-equilibrium conditions. For non-equilibrium steady states, particularly strong results hold like a generalized fluctuation–dissipation theorem involving entropy production. Ramifications and applications of these concepts include optimal driving between specified states in finite time, the role of measurement-based feedback processes and the relation between dissipation and irreversibility. Efficiency and, in particular, efficiency at maximum power can be discussed systematically beyond the linear response regime for two classes of molecular machines, isothermal ones such as molecular motors, and heat engines such as thermoelectric devices, using a common framework based on a cycle decomposition of entropy production. (Some figures may appear in colour only in the online journal) This article was invited by Erwin Frey.

/pdf/stochastic-thermodynamics-fluctuation-theorems-and-molecular-2epwyvmpf0.pdf

Stochastic thermodynamics, fluctuation theorems and molecular machines

: This thesis applies neural network feature selection techniques to multivariate time series data to improve prediction of a target time series. Two approaches to feature selection are used. First, a subset enumeration method is used to determine which financial indicators are most useful for aiding in prediction of the S&P 500 futures daily price. The candidate indicators evaluated include RSI, Stochastics and several moving averages. Results indicate that the Stochastics and RSI indicators result in better prediction results than the moving averages. The second approach to feature selection is calculation of individual saliency metrics. A new decision boundary-based individual saliency metric, and a classifier independent saliency metric are developed and tested. Ruck's saliency metric, the decision boundary based saliency metric, and the classifier independent saliency metric are compared for a data set consisting of the RSI and Stochastics indicators as well as delayed closing price values. The decision based metric and the Ruck metric results are similar, but the classifier independent metric agrees with neither of the other metrics. The nine most salient features, determined by the decision boundary based metric, are used to train a neural network and the results are presented and compared to other published results. (AN)

/pdf/nonlinear-time-series-analysis-1j3a35n4y3.pdf

Nonlinear Time Series Analysis.

Numerical Initial Value Problems in Ordinary Differential Equations

5. M. Green, J. Schwarz, and E. Witten, Superstring theory, Cambridge Univ. Press, 1987. 6. J. Isenberg, P. Yasskin, and P. Green, Non-self-dual gauge fields, Phys. Lett. 78B (1978), 462-464. 7. B. Kostant, Graded manifolds, graded Lie theory, and prequantization, Differential Geometric Methods in Mathematicas Physics, Lecture Notes in Math., vol. 570, SpringerVerlag, Berlin and New York, 1977. 8. C. LeBrun, Thickenings and gauge fields, Class. Quantum Grav. 3 (1986), 1039-1059. 9. , Thickenings and conformai gravity, preprint, 1989. 10. C. LeBrun and M. Rothstein, Moduli of super Riemann surfaces, Commun. Math. Phys. 117(1988), 159-176. 11. Y. Manin, Critical dimensions of string theories and the dualizing sheaf on the moduli space of (super) curves, Funct. Anal. Appl. 20 (1987), 244-245. 12. R. Penrose and W. Rindler, Spinors and space-time, V.2, spinor and twistor methods in space-time geometry, Cambridge Univ. Press, 1986. 13. R. Ward, On self-dual gauge fields, Phys. Lett. 61A (1977), 81-82. 14. E. Witten, An interpretation of classical Yang-Mills theory, Phys. Lett. 77NB (1978), 394-398. 15. , Twistor-like transform in ten dimensions, Nucl. Phys. B266 (1986), 245-264. 16. , Physics and geometry, Proc. Internat. Congr. Math., Berkeley, 1986, pp. 267302, Amer. Math. Soc, Providence, R.I., 1987.

Infinite-Dimensional Dynamical Systems in Mechanics and Physics (Roger Temam)

This book treats nonlinear dynamics in both Hamiltonian and dissipative systems. The emphasis is on the mechanics for generating chaotic motion, methods of calculating the transitions from regular to chaotic motion, and the dynamical and statistical properties of the dynamics when it is chaotic. The book is intended as a self consistent treatment of the subject at the graduate level and as a reference for scientists already working in the field. It emphasizes both methods of calculation and results. It is accessible to physicists and engineers without training in modern mathematics. The new edition brings the subject matter in a rapidly expanding field up to date, and has greatly expanded the treatment of dissipative dynamics to include most important subjects. It can be used as a graduate text for a two semester course covering both Hamiltonian and dissipative dynamics.

Cyril Touzé

Papers

Nonlinear normal modes for damped geometrically nonlinear systems: Application to reduced-order modelling of harmonically forced structures

Hardening/softening behaviour in non-linear oscillations of structural systems using non-linear normal modes

Asymmetric non-linear forced vibrations of free-edge circular plates. part 1: theory

Asymmetric non-linear forced vibrations of free-edge circular plates. Part II: Experiments

Non-linear vibrations of free-edge thin spherical shells: modal interaction rules and 1:1:2 internal resonance