Showing papers by "David E. Manolopoulos published in 2021"

Nuclear quantum effects in thermal conductivity from centroid molecular dynamics.

Abstract: We show that the centroid molecular dynamics (CMD) method provides a realistic way to calculate the thermal diffusivity a = λ/ρcV of a quantum mechanical liquid such as para-hydrogen. Once a has been calculated, the thermal conductivity can be obtained from λ = ρcVa, where ρ is the density of the liquid and cV is the constant-volume heat capacity. The use of this formula requires an accurate quantum mechanical heat capacity cV, which can be obtained from a path integral molecular dynamics simulation. The thermal diffusivity can be calculated either from the decay of the equilibrium density fluctuations in the liquid or by using the Green–Kubo relation to calculate the CMD approximation to λ and then dividing this by the corresponding approximation to ρcV. We show that both approaches give the same results for liquid para-hydrogen and that these results are in good agreement with the experimental measurements of the thermal conductivity over a wide temperature range. In particular, they correctly predict a decrease in the thermal conductivity at low temperatures—an effect that stems from the decrease in the quantum mechanical heat capacity and has eluded previous para-hydrogen simulations. We also show that the method gives equally good agreement with the experimental measurements for the thermal conductivity of normal liquid helium.

Spin relaxation in radical pairs from the stochastic Schrödinger equation

Abstract: We show that the stochastic Schrodinger equation (SSE) provides an ideal way to simulate the quantum mechanical spin dynamics of radical pairs. Electron spin relaxation effects arising from fluctuations in the spin Hamiltonian are straightforward to include in this approach, and their treatment can be combined with a highly efficient stochastic evaluation of the trace over nuclear spin states that is required to compute experimental observables. These features are illustrated in example applications to a flavin–tryptophan radical pair of interest in avian magnetoreception and to a problem involving spin-selective radical pair recombination along a molecular wire. In the first of these examples, the SSE is shown to be both more efficient and more widely applicable than a recent stochastic implementation of the Lindblad equation, which only provides a valid treatment of relaxation in the extreme-narrowing limit. In the second, the exact SSE results are used to assess the accuracy of a recently proposed combination of Nakajima–Zwanzig theory for the spin relaxation and Schulten–Wolynes theory for the spin dynamics, which is applicable to radical pairs with many more nuclear spins. We also analyze the efficiency of trace sampling in some detail, highlighting the particular advantages of sampling with SU(N) coherent states.

Spin relaxation in radical pairs from the stochastic Schr\"odinger equation.

Abstract: We show that the stochastic Schrodinger equation (SSE) provides an ideal way to simulate the quantum mechanical spin dynamics of radical pairs. Electron spin relaxation effects arising from fluctuations in the spin Hamiltonian are straightforward to include in this approach, and their treatment can be combined with a highly efficient stochastic evaluation of the trace over nuclear spin states that is required to compute experimental observables. These features are illustrated in example applications to a flavin-tryptophan radical pair of interest in avian magnetoreception, and to a problem involving spin-selective radical pair recombination along a molecular wire. In the first of these examples, the SSE is shown to be both more efficient and more widely applicable than a recent stochastic implementation of the Lindblad equation, which only provides a valid treatment of relaxation in the extreme-narrowing limit. In the second, the exact SSE results are used to assess the accuracy of a recently-proposed combination of Nakajima-Zwanzig theory for the spin relaxation and Schulten-Wolynes theory for the spin dynamics, which is applicable to radical pairs with many more nuclear spins. An appendix analyses the efficiency of trace sampling in some detail, highlighting the particular advantages of sampling with SU(N) coherent states.

Nuclear quantum effects in thermal conductivity from centroid molecular dynamics

Abstract: We show that the centroid molecular dynamics (CMD) method provides a realistic way to calculate the thermal diffusivity $a=\lambda/\rho c_{\rm V}$ of a quantum mechanical liquid such as para-hydrogen. Once $a$ has been calculated, the thermal conductivity can be obtained from $\lambda=\rho c_{\rm V}a$, where $\rho$ is the density of the liquid and $c_{\rm V}$ is the constant-volume heat capacity. The use of this formula requires an accurate quantum mechanical heat capacity $c_{\rm V}$, which can be obtained from a path integral molecular dynamics simulation. The thermal diffusivity can be calculated either from the decay of the equilibrium density fluctuations in the liquid or by using the Green-Kubo relation to calculate the CMD approximation to $\lambda$ and then dividing this by the corresponding approximation to $\rho c_{\rm V}$. We show that both approaches give the same results for liquid para-hydrogen and that these results are in good agreement with experimental measurements of the thermal conductivity over a wide temperature range. In particular, they correctly predict a decrease in the thermal conductivity at low temperatures -- an effect that stems from the decrease in the quantum mechanical heat capacity and has eluded previous para-hydrogen simulations. We also show that the method gives equally good agreement with experimental measurements for the thermal conductivity of normal liquid helium.