Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

The Theory of Island Biogeography

So far in this course we have dealt entirely with the evolution of characters that are controlled by simple Mendelian inheritance at a single locus. There are notes on the course website about gametic disequilibrium and how allele frequencies change at two loci simultaneously, but we didn’t discuss them. In every example we’ve considered we’ve imagined that we could understand something about evolution by examining the evolution of a single gene. That’s the domain of classical population genetics. For the next few weeks we’re going to be exploring a field that’s actually older than classical population genetics, although the approach we’ll be taking to it involves the use of population genetic machinery. If you know a little about the history of evolutionary biology, you may know that after the rediscovery of Mendel’s work in 1900 there was a heated debate between the “biometricians” (e.g., Galton and Pearson) and the “Mendelians” (e.g., de Vries, Correns, Bateson, and Morgan). Biometricians asserted that the really important variation in evolution didn’t follow Mendelian rules. Height, weight, skin color, and similar traits seemed to

Human biochemical genetics

Bacterial biofilms are formed by communities that are embedded in a self-produced matrix of extracellular polymeric substances (EPS). Importantly, bacteria in biofilms exhibit a set of 'emergent properties' that differ substantially from free-living bacterial cells. In this Review, we consider the fundamental role of the biofilm matrix in establishing the emergent properties of biofilms, describing how the characteristic features of biofilms - such as social cooperation, resource capture and enhanced survival of exposure to antimicrobials - all rely on the structural and functional properties of the matrix. Finally, we highlight the value of an ecological perspective in the study of the emergent properties of biofilms, which enables an appreciation of the ecological success of biofilms as habitat formers and, more generally, as a bacterial lifestyle.

Biofilms: an emergent form of bacterial life.

In its simplest definition, a trait is a surrogate of organismal performance, and this meaning of the term has been used by evolutionists for a long time. Over the last three decades, developments in community and ecosystem ecology have forced the concept of trait beyond these original boundaries, and trait-based approaches are now widely used in studies ranging from the level of organisms to that of ecosystems. Despite some attempts to fix the terminology, especially in plant ecology, there is currently a high degree of confusion in the use, not only of the term "trait" itself, but also in the underlying concepts it refers to. We therefore give an unambiguous definition of plant trait, with a particular emphasis on functional trait. A hierarchical perspective is proposed, extending the "performance paradigm" to plant ecology. "Functional traits" are defined as morpho-physiophenological traits which impact fitness indirectly via their effects on growth, reproduction and survival, the three components of individual performance. We finally present an integrative framework explaining how changes in trait values due to environmental variations are translated into organismal performance, and how these changes may influence processes at higher organizational levels. We argue that this can be achieved by developing "integration functions" which can be grouped into functional response (community level) and effect (ecosystem level) algorithms.

/pdf/let-the-concept-of-trait-be-functional-2ppbgwsn3s.pdf

Let the concept of trait be functional

Genetics and analysis of quantitative traits

Marine-derived nutrients from salmon carcasses and leaf litter inputs from riparian vegetation may interactively support stream biodiversity and ecosystem functioning through enhanced resource heterogeneity. Using a full-factorial de- sign of single- and mixed-species litters, we tested for influences of salmon carcasses on in-stream litter decomposition. Overall, nonadditive (synergistic and antagonistic) effects on decomposition were detected for litter species mixtures, and these effects were explained by litter species composition, but not species richness. In middle to late stages of decay, mix- tures of labile (high-quality) litters showed faster than expected mass loss, and recalcitrant (low-quality) litter mixtures showed slower than expected mass loss. The presence or absence of each litter species differentially affected decomposition, but these patterns were stronger when salmon carcasses were available. Across all treatments, the influence of salmon car- casses on decomposition was most pronounced in mid-stages of litter decay, where deceleration of decomposition was likely caused by macroinvertebrates feeding on salmon carcasses and less on litter. Combined, these data demonstrate that salmon carcass inputs to streams can enhance detrital heterogeneity, alter interactions among species in litter mixtures, and influence ecosystem functioning (i.e., decomposition).

effects on in-stream decomposition

Forest tree canopies have a critical influence on water cycles through the interception of precipitation. Nevertheless, radial patterns of canopy interception may vary interspecifically. We analyzed canopy interception using catchments along radial transects underneath four common forest tree species (Acer macrophyllum, Alnus rubra, Pseudotsuga menziesii, and Thuja plicata) in the Pacific Northwest over two years. Near the center of the canopy in the leaf-off season, interception was 51.6%–67.2% in conifer species and only 20.1%–40.1% in broadleaf species, and interception declined to 19.9–29.9 for all species near the edge of the canopy. One deciduous species (A. rubra) showed spatially uniform interception during the leaf-off period (19.9%–20.96%), while another varied from 23.1%–40.1%. Patterns were more pronounced in the leaf-on period (under high vapor pressure deficit conditions), where conifers intercepted 36.5%–95.9% of precipitation, depending on the species and position under the canopy. Deciduous species similarly intercepted 42.1%–67.7% of rainfall, depending on species and canopy position. Total throughfall was curvilinearly related to the amount of rainfall near canopy centers for conifer trees but less so for deciduous trees. Soil moisture was predictably related to interception across and within species. These data highlight interspecific differences in radial interception patterns, with consequences for soil moisture, hydrologic processes, and ecosystem function.

/pdf/distinct-rainfall-interception-profiles-among-four-common-2o2ykbgy.pdf

Dylan G. Fischer

Papers

effects on in-stream decomposition

Distinct Rainfall Interception Profiles among Four Common Pacific Northwest Tree Species

Measuring Individual Tree Water-use in Mature Native Species in the Pacific Northwest to Determine their Benefits for Stormwater Management