Influence of salinity and water content on soil microorganisms

Salinization of soil is recognised as one of the most pressing environmental challenges to resolve for the next century. We here conduct a synoptic review of the available research on how salt affects decomposer microbial communities and carbon (C) cycling in soil. After summarizing known physiological responses of microorganisms to salinity, we provide a brief overview and qualification of a selection of widely applied methods to assess microorganisms in soil to date. The dominant approaches to characterise microbial responses to salt exposure have so far been microbial biomass and respiration measurements. We compile datasets from a selection of studies and find that (1) microbial biomass-carbon (C) per C held in soil organic matter shows no consistent pattern with long-term (field gradients) or short-term (laboratory additions) soil salinity level, and (2) respiration per soil organic C is substantially inhibited by higher salt concentrations in soil, and consistently so for both short-term and long-term salinity levels. Patterns that emerge from extra-cellular enzyme assessments are more difficult to generalize, and appear to vary with the enzyme studied, and its context. Growth based assessments of microbial responses to salinization are largely lacking. Relating the established responses of microbial respiration to that of growth could provide an estimate for how the microbial C-use efficiency would be affected by salt exposure. This would be a valuable predictor for changes in soil C sequestration. A few studies have investigated the connection between microbial tolerance to salt and the soil salinity levels, but so far results have not been conclusive. We predict that more systematic inquiries including comprehensive ranges of soil salinities will substantiate a connection between soil salinity and microbial tolerance to salt. This would confirm that salinity has a direct effect on the composition of microbial communities. While salt has been identified as one of the most powerful environmental factors to structure microbial communities in aquatic environments, no up-to-date sequence based assessments currently exist from soil. Filling this gap should be a research priority. Moreover, linking sequencing based assessments of microbial communities to their tolerance to salt would have the potential to yield biomarker sets of microbial sequences. This could provide predictive power for, e.g., the sensitivity of agricultural soils to salt exposure, and, as such, a useful tool for soil resource management. We conclude that salt exposure has a powerful influence on soil microbial communities and processes. In addition to being one of the most pressing agricultural problems to solve, this influence could also be used as an experimental probe to better understand how microorganisms control the biogeochemistry in soil. (C) 2014 Elsevier Ltd. All rights reserved. (Less)

Salt effects on the soil microbial decomposer community and their role in organic carbon cycling: A review

For centuries, wastewater has been improperly used in agriculture, presenting potential risks to public health and the environment. In the context of scientific development, and confronted by an increasing water crisis, wastewater reuse merits consideration because the practice helps decrease water use pressure and moderates water pollution. Thus, this article presents a literature review that addresses the effects, both positive and negative, of wastewater use in agriculture, emphasizing the effects on the soil environment. The literature review reveals that, until the 1990s, research studies promoted the use of wastewater for irrigation purposes from a treatment approach, while proposing “end of pipe” conventional solutions. However, more recent research studies (2012–2016) reveal that agricultural reuse significantly affects soil texture properties, while also causing possible alterations of the biomass and microbiota. In addition, research in this period has been oriented to the quantitative evaluation of microbiological risk.

https://www.mdpi.com/2071-1050/9/10/1734/pdf

Wastewater Reuse in Agriculture: A Review about Its Limitations and Benefits

This paper reviews chemical, physical, and biological problems of salt-affected soils and different reclamation methods applied to rehabilitate these soils. Methods to increase C stocks in these lands are discussed with a focus on biochar application as a potential new approach to not only to increase the C content but also to improve soil properties. Gaps in research knowledge in this field are then identified. Given the concern on the continued worldwide expansion of salt-affected lands and the focus on C sequestration processes, this review has evaluated current knowledge on salt-affected soils and their remediation with organic materials and plants. The review of the published literature has highlighted important gaps in knowledge, which limit our current understanding of rehabilitation of salt-affected soils with organic amendments specially biochar and the associated carbon dynamic. Knowledge about application of biochar in salt-affected soils is scant, and to date, most studies have evaluated biochar use only in nonsalt-affected soils.

Salt-affected soils, reclamation, carbon dynamics, and biochar: a review

Salinization and sodication are abiotic soil factors, important hazards to soil fertility and consequently affect the crop production. Soil salinization is of great concern for irrigated agriculture in arid and semi-arid regions of the world; sodicity is characterized by an excessively high concentration of sodium (Na) in their cation exchange system. In recent times, attention has been turned to study the impacts of these factors (salinity and sodicity) on soil microbial activities. Microbial activities play central role in degradation and decomposition of soil organic matter, mineralization of nutrients and stabilization of soil aggregates. To understand the ecology of soil system, therefore, it is important to be conversant with the soil microbial activities, which show quick response to little change in the soil environment. Microbial activities (generally measured as C–N dynamics, soil respiration–basal respiration, or CO2 emission), microbial abundance, microbial biomass, quotients (microbial and metabolic) and microbial community structure, and soil enzymes have been considered as potential indicators to assess the severity of the land degradation and the effectiveness of land use management. Therefore, it is important to synthesize the available information regarding microbial activities in use and management of salt-affected soils. The reclamation and management of such soils and their physico-chemical properties have been reviewed well in the literature. In this review, an attempt has been made to compile the current knowledge about the effects of soil salinization and sodication on microbial and enzyme activities and identify research gaps for future research. Copyright © 2015 John Wiley & Sons, Ltd.

Microbial and Enzyme Activities of Saline and Sodic Soils

Microbial biomass and activity in salt affected soils under arid conditions

http://ir.yic.ac.cn/bitstream/133337/4417/1/Dynamics%20of%20a%20host-parasitoid%20model%20with%20Allee%20effect%20for%20the%20host%20and%20parasitoid%20aggregation.pdf

Dynamics of a host-parasitoid model with Allee effect for the host and parasitoid aggregation

Spatial synchrony is common, and its influences and causes have attracted the interest of ecologists. Spatially correlated environmental noise, dispersal, and trophic interactions have been considered as the causes of spatial synchrony. In this study, we developed a spatially structured population model, which is described by coupled-map lattices. Our recent investigation showed that trophic correlation of environmental noise was another important factor that affects spatial synchrony. As a supplement, we considered the influence of the color of the environmental noise on the spatial synchrony in this study. The noise color refers to the temporal correlation in the time series data of the noise, and is expressed as the degree of (first-order) autocorrelation for autoregressive noise. Patterns of spatial synchrony were considered for stable, periodic (quasi-periodic), and chaotic population dynamics. Numerical simulations verified that the color of the environmental noise is another mechanism that causes spatial synchrony. Generally, the effect of the color of the noise on the synchrony is dependent on the type of dynamics (stable, cyclic, chaotic) present in the population. For cyclic dynamics, simulation results clearly demonstrate that reddened noise has higher synchrony than white noise. The importance of our research is that it enriches the theory of potential causes of spatial synchrony.

Dispersal, colored environmental noise, and spatial synchrony in population dynamics: analyzing a discrete host–parasitoid population model

In this paper, computer simulation is used to study the dynamic complexities of a host-parasitoid interaction with a Hassell growth function for the host and Holling-type functional response. Many forms of complex dynamic are observed, including quasiperiodic bands with periodic windows, Hopf bifurcation, period-doubling bifurcations, period-halving bifurcations, attractor crisis, intermittent chaos, supertransient behavior, multiple attractors with fractal basins of attraction. The numerical results indicate that computer simulation is a useful method of investigating complex dynamic systems.

Hua Liu

Papers

Microbial biomass and activity in salt affected soils under arid conditions

Dynamics of a host-parasitoid model with Allee effect for the host and parasitoid aggregation

Dispersal, colored environmental noise, and spatial synchrony in population dynamics: analyzing a discrete host–parasitoid population model

Computer Simulation of the Dynamic Complexity of a Host-parasitoid Model