System Identification I

A survey on ECG analysis

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Medical Instrumentation Application And Design

This paper introduces a real-time data compression and transmission algorithm between e-health terminals for a periodic ECGsignal. The proposed algorithm consists of five compression procedures and four reconstruction procedures. In order to evaluate the performance of the proposed algorithm, the algorithm was applied to all 48 recordings of MIT-BIH arrhythmia database, and the compress ratio (CR), percent root mean square difference (PRD), percent root mean square difference normalized (PRDN), rms, SNR, and quality score (QS) values were obtained. The result showed that the CR was 27.9:1 and the PRD was 2.93 on average for all 48 data instances with a 15% window size. In addition, the performance of the algorithm was compared to those of similar algorithms introduced recently by others. It was found that the proposed algorithm showed clearly superior performance in all 48 data instances at a compression ratio lower than 15:1, whereas it showed similar or slightly inferior PRD performance for a data compression ratio higher than 20:1. In light of the fact that the similarity with the original data becomes meaningless when the PRD is higher than 2, the proposed algorithm shows significantly better performance compared to the performance levels of other algorithms. Moreover, because the algorithm can compress and transmit data in real time, it can be served as an optimal biosignal data transmission method for limited bandwidth communication between e-health devices.

A Real-Time ECG Data Compression and Transmission Algorithm for an e-Health Device

An efficient compression of ECG signals using deep convolutional autoencoders

This paper introduces a problem-based learning (PBL) microprocessor application course designed according to the following strategies: 1) hands-on training without having a formal laboratory, and 2) intense student-centered cooperative learning through an ill-structured problem. PBL was adopted as the core educational technique of the course to accomplish student learning outcomes such as fundamental knowledge acquisition and applications, practical design experiences, problem-solving skills, higher-order thinking, teamwork and communication skills, and lifelong self-directed learning capability. In the designed course, students were required to build their own hardware system on a breadboard and learn how to program, download, and execute from a student mentor's demonstration. Students were also asked to choose a design topic for their team project with minimum guidelines and were encouraged to learn whatever was necessary to accomplish the project autonomously. The course has been offered for two years and has obtained overwhelming positive feedback from students.

An Ill-Structured PBL-Based Microprocessor Course Without Formal Laboratory

In this paper a simple signal segmentation algorithm is introduced. The algorithm determines the epochs of signal components of interest based on signal characteristic such as amplitude, slope, deflection width, or distance between neighboring deflections. The epochs are segmented indirectly by means of a slope trace wave that traces a signal with its average slope and predetermined delay. The algorithm is applied to ECG and electrogram to show its practical applicability and efficiency. It is found that the algorithm can be used to choose particular signal components appropriately without significant signal preprocessing or complexity.

A biomedical signal segmentation algorithm for event detection based on slope tracing

A new electrocardiogram (ECG) reconstruction method based on a state-space model is presented. This method was applied to reconstruct precordial leads from limb leads (lead I, II, III) for its validity verification. The system matrices of the state-space model were estimated at the model estimation stage by considering the limb lead signals as the input of the system and precordial lead signals as the output. To evaluate the performance of the proposed method, all of the 549 records of the Physikalisch Technische Bundesanstalt diagnostic ECG database were used, and the correlation coefficients (CC) and root-mean-square errors between reconstructed ECG and measured ECG were calculated. For a more objective evaluation, the results were compared with those of linear regression model that has been typically used for ECG reconstruction. The mean and median values of CCs were higher than 0.988 and 0.995, respectively, for healthy subject data, and also higher than 0.981 and 0.993, respectively, for cardiac patient data and comparable to those by linear regression model. In addition, it was found that the reconstruction performance depended on the type of disease rather than lead type. Among cardiac patient data, hypertrophy, myocarditis, valvular heart disease, and stable heart angina showed higher CC (>0.990), while unstable angina and heart failure showed lower CC of 0.932 and 0.914, respectively. Moreover, when ECG contaminated with the noise was used for reconstruction, the proposed method demonstrated better performance than linear regression model in general.

Reconstruction of Precordial Lead Electrocardiogram From Limb Leads Using the State-Space Model

Purpose: A new automatic quality assurance (AutoRCQA) system using a three-dimensional scanner (3DS) with system automation was developed to improve the accuracy and efficiency of the quality assurance (QA) procedure for proton range compensators (RCs). The system performance was evaluated for clinical implementation. Methods: The AutoRCQA system consists of a three-dimensional measurement system (3DMS) based on 3DS and in-house developed verification software (3DVS). To verify the geometrical accuracy, the planned RC data (PRC), calculated with the treatment planning system (TPS), were reconstructed and coregistered with the measured RC data (MRC) based on the beam isocenter. The PRC and MRC inner surfaces were compared with composite analysis (CA) using 3DVS, using the CA pass rate for quantitative analysis. To evaluate the detection accuracy of the system, the authors designed a fake PRC by artificially adding small cubic islands with side lengths of 1.5, 2.5, and 3.5 mm on the inner surface of the PRC and performed CA with the depth difference and distance-to-agreement tolerances of [1 mm, 1 mm], [2 mm, 2 mm], and [3 mm, 3 mm]. In addition, the authors performed clinical tests using seven RCs [computerized milling machine (CMM)-RCs] manufactured by CMM, which were designed for treating various disease sites. The systematic offsets of the seven CMM-RCs were evaluated through the automatic registration function of AutoRCQA. For comparison with conventional technique, the authors measured the thickness at three points in each of the seven CMM-RCs using a manual depth measurement device and calculated thickness difference based on the TPS data (TPS-manual measurement). These results were compared with data obtained from 3DVS. The geometrical accuracy of each CMM-RC inner surface was investigated using the TPS data by performing CA with the same criteria. The authors also measured the net processing time, including the scan and analysis time. Results: The AutoRCQA system accurately detected all fake objects in accordance with the given criteria. The median systematic offset of the seven CMM-RCs was 0.08 mm (interquartile range: −0.25 to 0.37 mm) and −0.08 mm (−0.58 to 0.01 mm) in the X- and Y-directions, respectively, while the median distance difference was 0.37 mm (0.23–0.94 mm). The median thickness difference of the TPS-manual measurement at points 1, 2, and 3 was −0.4 mm (−0.4 to −0.2 mm), −0.2 mm (−0.3 to 0.0 mm), and −0.3 mm (−0.6 to −0.1 mm), respectively, while the median difference of 3DMS was 0.0 mm (−0.1 to 0.2 mm), 0.0 mm (−0.1 to 0.3 mm), and 0.1 mm (−0.1 to 0.2 mm), respectively. Thus, 3DMS showed slightly better values compared to the manual measurements for points 1 and 3 in statistical analysis (p < 0.05). The average pass rate of the seven CMM-RCs was 97.97% ± 1.68% for 1-mm CA conditions, increasing to 99.98% ± 0.03% and 100% ± 0.00% for 2- and 3-mm CA conditions, respectively. The average net analysis time was 18.01 ± 1.65 min. Conclusions: The authors have developed an automated 3DS-based proton RC QA system and verified its performance. The AutoRCQA system may improve the accuracy and efficiency of QA for RCs.

Jungkuk Kim

Papers

A Real-Time ECG Data Compression and Transmission Algorithm for an e-Health Device

An Ill-Structured PBL-Based Microprocessor Course Without Formal Laboratory

A biomedical signal segmentation algorithm for event detection based on slope tracing

Reconstruction of Precordial Lead Electrocardiogram From Limb Leads Using the State-Space Model

Development of a 3D optical scanning-based automatic quality assurance system for proton range compensators.