L
Lesley Raven
Researcher at University of Melbourne
Publications - 2
Citations - 983
Lesley Raven is an academic researcher from University of Melbourne. The author has an hindex of 2, co-authored 2 publications receiving 739 citations.
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Journal ArticleDOI
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Michael Inouye,Harriet Dashnow,Harriet Dashnow,Lesley Raven,Mark B. Schultz,Bernard J. Pope,Bernard J. Pope,Takehiro Tomita,Justin Zobel,Kathryn E. Holt +9 more
TL;DR: This work presents SRST2, a read mapping-based tool for fast and accurate detection of genes, alleles and multi-locus sequence types (MLST) from WGS data, which is highly accurate and outperforms assembly-based methods in terms of both gene detection and allele assignment.
Posted ContentDOI
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Michael Inouye,Harriet Dashnow,Lesley Raven,Mark B. Schultz,Bernard J. Pope,Takehiro Tomita,Justin Zobel,Kathryn E. Holt +7 more
TL;DR: Using >900 genomes from common pathogens, SRST2 is highly accurate and outperforms assembly-based methods in terms of both gene detection and allele assignment and represents a powerful tool for rapidly extracting clinically useful information from raw WGS data.